RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 WWC1Q8IX03 1113 aa12.65□□□□□ -0.38
TRIO-220ENST00000512979 PXDNLA1KZ92 1463 aa12.65□□□□□ -0.38
TRIO-220ENST00000512979 USP42Q9H9J4 1324 aaKnown RBP12.64□□□□□ -0.39
TRIO-220ENST00000512979 C10orf71Q711Q0 1435 aa12.64□□□□□ -0.39
TRIO-220ENST00000512979 ATP10DQ9P241 1426 aa12.64□□□□□ -0.39
TRIO-220ENST00000512979 ABL2P42684 1182 aa12.64□□□□□ -0.39
TRIO-220ENST00000512979 TGFB2P61812 414 aa12.64□□□□□ -0.39
TRIO-220ENST00000512979 RDH13Q8NBN7 331 aa12.64□□□□□ -0.39
TRIO-220ENST00000512979 GAS2L2Q8NHY3 880 aa12.64□□□□□ -0.39
TRIO-220ENST00000512979 TJP1Q07157 1748 aa12.64□□□□□ -0.39
TRIO-220ENST00000512979 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
TRIO-220ENST00000512979 SMAPO00193 183 aa12.63□□□□□ -0.39
TRIO-220ENST00000512979 CFAP53Q96M91 514 aa12.63□□□□□ -0.39
TRIO-220ENST00000512979 PRM3Q9NNZ6 103 aa12.63□□□□□ -0.39
TRIO-220ENST00000512979 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
TRIO-220ENST00000512979 SOS1Q07889 1333 aaPredicted RBP12.62□□□□□ -0.39
TRIO-220ENST00000512979 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
TRIO-220ENST00000512979 SENP3-EIF4A1A0A087X0R7 540 aa12.62□□□□□ -0.39
TRIO-220ENST00000512979 CYP19A1P11511 503 aaPredicted RBP12.62□□□□□ -0.39
TRIO-220ENST00000512979 DPEP1P16444 411 aa12.62□□□□□ -0.39
TRIO-220ENST00000512979 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
TRIO-220ENST00000512979 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
TRIO-220ENST00000512979 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
TRIO-220ENST00000512979 ADCY9O60503 1353 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 KDM4AO75164 1064 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 ZPR1O75312 459 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 DDR1Q08345 913 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 TEFQ10587 303 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 USPL1Q5W0Q7 1092 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 POTEHQ6S545 545 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 ZBTB1Q9Y2K1 713 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
TRIO-220ENST00000512979 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
TRIO-220ENST00000512979 USP17L8P0C7I0 530 aa12.6□□□□□ -0.39
TRIO-220ENST00000512979 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
TRIO-220ENST00000512979 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
TRIO-220ENST00000512979 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
TRIO-220ENST00000512979 ZNF526Q8TF50 670 aaPredicted RBP12.6□□□□□ -0.39
TRIO-220ENST00000512979 TRAIPQ9BWF2 469 aa12.6□□□□□ -0.39
TRIO-220ENST00000512979 NUDCQ9Y266 331 aa12.6□□□□□ -0.39
TRIO-220ENST00000512979 COL15A1P39059 1388 aa12.59□□□□□ -0.39
TRIO-220ENST00000512979 POM121CA8CG34 1229 aa12.59□□□□□ -0.39
TRIO-220ENST00000512979 POLRMTO00411 1230 aaKnown RBP12.59□□□□□ -0.39
TRIO-220ENST00000512979 PPP2R1AP30153 589 aa12.59□□□□□ -0.39
TRIO-220ENST00000512979 PROX2Q3B8N5 592 aa12.59□□□□□ -0.39
TRIO-220ENST00000512979 PHACTR3Q96KR7 559 aa12.59□□□□□ -0.39
TRIO-220ENST00000512979 CALR3Q96L12 384 aaKnown RBP12.59□□□□□ -0.39
TRIO-220ENST00000512979 KIAA1551Q9HCM1 1747 aa12.59□□□□□ -0.39
TRIO-220ENST00000512979 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.39
TRIO-220ENST00000512979 STARD3NLO95772 234 aa12.58□□□□□ -0.4
TRIO-220ENST00000512979 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.4
TRIO-220ENST00000512979 CANXP27824 592 aaKnown RBP12.58□□□□□ -0.4
TRIO-220ENST00000512979 TM4SF1P30408 202 aa12.58□□□□□ -0.4
TRIO-220ENST00000512979 U2AF1Q01081 240 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRIO-220ENST00000512979 PRPF38BQ5VTL8 546 aaKnown RBP12.58□□□□□ -0.4
TRIO-220ENST00000512979 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
TRIO-220ENST00000512979 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.4
TRIO-220ENST00000512979 NARFQ9UHQ1 456 aa12.58□□□□□ -0.4
TRIO-220ENST00000512979 VIRMAQ69YN4 1812 aaKnown RBP12.58□□□□□ -0.4
TRIO-220ENST00000512979 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
TRIO-220ENST00000512979 KCNA3P22001 575 aa12.57□□□□□ -0.4
TRIO-220ENST00000512979 NFIXQ14938 502 aa12.57□□□□□ -0.4
TRIO-220ENST00000512979 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
TRIO-220ENST00000512979 PIM2Q9P1W9 311 aa12.57□□□□□ -0.4
TRIO-220ENST00000512979 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
TRIO-220ENST00000512979 CHRNA5P30532 468 aa12.56□□□□□ -0.4
TRIO-220ENST00000512979 GCGRP47871 477 aa12.56□□□□□ -0.4
TRIO-220ENST00000512979 GLMNQ92990 594 aa12.56□□□□□ -0.4
TRIO-220ENST00000512979 ZBTB3Q9H5J0 574 aa12.56□□□□□ -0.4
TRIO-220ENST00000512979 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
TRIO-220ENST00000512979 A0A087WZG4 1122 aa12.55□□□□□ -0.4
TRIO-220ENST00000512979 BTBD11A6QL63 1104 aa12.55□□□□□ -0.4
TRIO-220ENST00000512979 HOXA2O43364 376 aa12.55□□□□□ -0.4
TRIO-220ENST00000512979 USP46P62068 366 aa12.55□□□□□ -0.4
TRIO-220ENST00000512979 DALRD3Q5D0E6 543 aaKnown RBP12.55□□□□□ -0.4
TRIO-220ENST00000512979 RETREG2Q8NC44 543 aa12.55□□□□□ -0.4
TRIO-220ENST00000512979 FMNL2Q96PY5 1086 aa12.55□□□□□ -0.4
TRIO-220ENST00000512979 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
TRIO-220ENST00000512979 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
TRIO-220ENST00000512979 SCUBE2Q9NQ36 999 aa12.55□□□□□ -0.4
TRIO-220ENST00000512979 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
TRIO-220ENST00000512979 KCNQ3O43525 872 aa12.54□□□□□ -0.4
TRIO-220ENST00000512979 SERPINB2P05120 415 aa12.54□□□□□ -0.4
TRIO-220ENST00000512979 FDX1P10109 184 aa12.54□□□□□ -0.4
TRIO-220ENST00000512979 EIF5P55010 431 aaKnown RBP12.54□□□□□ -0.4
TRIO-220ENST00000512979 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
TRIO-220ENST00000512979 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
TRIO-220ENST00000512979 MCM10Q7L590 875 aa12.53□□□□□ -0.4
TRIO-220ENST00000512979 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
TRIO-220ENST00000512979 SIPA1L3O60292 1781 aaPredicted RBP12.52□□□□□ -0.41
TRIO-220ENST00000512979 A1BGP04217 495 aa12.52□□□□□ -0.41
TRIO-220ENST00000512979 IL6STP40189 918 aaPredicted RBP12.52□□□□□ -0.41
TRIO-220ENST00000512979 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.41
TRIO-220ENST00000512979 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
TRIO-220ENST00000512979 PCDHGC3Q9UN70 934 aa12.52□□□□□ -0.41
TRIO-220ENST00000512979 NDUFB9Q9Y6M9 179 aa12.52□□□□□ -0.41
TRIO-220ENST00000512979 BRCA1P38398 1863 aaKnown RBP12.52□□□□□ -0.41
TRIO-220ENST00000512979 HOXB1P14653 301 aaPredicted RBP12.51□□□□□ -0.41
TRIO-220ENST00000512979 GUCA2AQ02747 115 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms