RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 USHBP1Q8N6Y0 703 aa9.08□□□□□ -0.96
RAB28-207ENST00000511649 BANK1Q8NDB2 785 aa9.08□□□□□ -0.96
RAB28-207ENST00000511649 LTV1Q96GA3 475 aaPredicted RBP9.08□□□□□ -0.96
RAB28-207ENST00000511649 PUS7Q96PZ0 661 aaKnown RBP9.08□□□□□ -0.96
RAB28-207ENST00000511649 NINLQ9Y2I6 1382 aa9.08□□□□□ -0.96
RAB28-207ENST00000511649 PKD1L3Q7Z443 1732 aa9.08□□□□□ -0.96
RAB28-207ENST00000511649 FYB1O15117 783 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 GDF9O60383 454 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 NR6A1Q15406 480 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 SLC15A2Q16348 729 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 NBPF14Q5TI25 921 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 HDGFL2Q7Z4V5 671 aaPredicted RBP9.07□□□□□ -0.96
RAB28-207ENST00000511649 BAP1Q92560 729 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 CARD14Q9BXL6 1004 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 GGNBP2Q9H3C7 697 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 SPON1Q9HCB6 807 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 PKD2L1Q9P0L9 805 aa9.07□□□□□ -0.96
RAB28-207ENST00000511649 NCAPD2Q15021 1401 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 TAF1LQ8IZX4 1826 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 SH3BP2P78314 561 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 PRR20EP86478 221 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 PRR20CP86479 221 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 PRR20DP86480 221 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 PRR20BP86481 221 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 PRR20AP86496 221 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 NBPF6Q5VWK0 638 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 ZNF511Q8NB15 262 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 NBPF4Q96M43 638 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 PDZRN3Q9UPQ7 1066 aa9.06□□□□□ -0.96
RAB28-207ENST00000511649 ITGB4P16144 1822 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 C5P01031 1676 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 RTL1A6NKG5 1358 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 WNT7AO00755 349 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 FOXC1Q12948 553 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 ARMC2Q8NEN0 867 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 EPS8L1Q8TE68 723 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 TERF2IPQ9NYB0 399 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 MAP2P11137 1827 aaKnown RBP9.05□□□□□ -0.96
RAB28-207ENST00000511649 NSD3Q9BZ95 1437 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 PNPLA7Q6ZV29 1317 aa9.05□□□□□ -0.96
RAB28-207ENST00000511649 C11orf95C9JLR9 678 aaPredicted RBP9.04□□□□□ -0.96
RAB28-207ENST00000511649 TNFRSF10AO00220 468 aa9.04□□□□□ -0.96
RAB28-207ENST00000511649 RC3H1Q5TC82 1133 aaKnown RBP9.04□□□□□ -0.96
RAB28-207ENST00000511649 AMIGO3Q86WK7 504 aa9.04□□□□□ -0.96
RAB28-207ENST00000511649 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
RAB28-207ENST00000511649 EMILIN1Q9Y6C2 1016 aa9.04□□□□□ -0.96
RAB28-207ENST00000511649 LCE2BO14633 110 aa9.03□□□□□ -0.96
RAB28-207ENST00000511649 HSP90AB2PQ58FF8 381 aa9.03□□□□□ -0.96
RAB28-207ENST00000511649 MTMR14Q8NCE2 650 aa9.03□□□□□ -0.96
RAB28-207ENST00000511649 DDX54Q8TDD1 881 aaKnown RBP9.03□□□□□ -0.96
RAB28-207ENST00000511649 FHDC1Q9C0D6 1143 aaPredicted RBP9.03□□□□□ -0.96
RAB28-207ENST00000511649 STK32BQ9NY57 414 aa9.03□□□□□ -0.96
RAB28-207ENST00000511649 FKBPLQ9UIM3 349 aa9.03□□□□□ -0.96
RAB28-207ENST00000511649 NRG2O14511 850 aaPredicted RBP9.02□□□□□ -0.97
RAB28-207ENST00000511649 TRIM26Q12899 539 aaPredicted RBP9.02□□□□□ -0.97
RAB28-207ENST00000511649 GPKOWQ92917 476 aaPredicted RBP eCLIP9.02□□□□□ -0.97
RAB28-207ENST00000511649 COG3Q96JB2 828 aa9.02□□□□□ -0.97
RAB28-207ENST00000511649 MRGPRX2Q96LB1 330 aa9.02□□□□□ -0.97
RAB28-207ENST00000511649 SNRKQ9NRH2 765 aa9.02□□□□□ -0.97
RAB28-207ENST00000511649 UBR3Q6ZT12 1888 aa9.02□□□□□ -0.97
RAB28-207ENST00000511649 ZC3H4Q9UPT8 1303 aaKnown RBP9.02□□□□□ -0.97
RAB28-207ENST00000511649 INSRP06213 1382 aa9.01□□□□□ -0.97
RAB28-207ENST00000511649 CYP27B1O15528 508 aa9.01□□□□□ -0.97
RAB28-207ENST00000511649 FOXJ1Q92949 421 aa9.01□□□□□ -0.97
RAB28-207ENST00000511649 SYT17Q9BSW7 474 aa9.01□□□□□ -0.97
RAB28-207ENST00000511649 MTFR1LQ9H019 292 aa9.01□□□□□ -0.97
RAB28-207ENST00000511649 FLT4P35916 1363 aa9□□□□□ -0.97
RAB28-207ENST00000511649 MAP3K5Q99683 1374 aa9□□□□□ -0.97
RAB28-207ENST00000511649 CHD4Q14839 1912 aa9□□□□□ -0.97
RAB28-207ENST00000511649 YY1P25490 414 aa9□□□□□ -0.97
RAB28-207ENST00000511649 AMPHP49418 695 aa9□□□□□ -0.97
RAB28-207ENST00000511649 SMIM5Q71RC9 77 aa9□□□□□ -0.97
RAB28-207ENST00000511649 EHBP1Q8NDI1 1231 aa9□□□□□ -0.97
RAB28-207ENST00000511649 PPP1R1BQ9UD71 204 aaPredicted RBP9□□□□□ -0.97
RAB28-207ENST00000511649 C4BP0C0L5 1744 aa9□□□□□ -0.97
RAB28-207ENST00000511649 TMF1P82094 1093 aa8.99□□□□□ -0.97
RAB28-207ENST00000511649 C4orf48Q5BLP8 95 aa8.99□□□□□ -0.97
RAB28-207ENST00000511649 SH3BP5LQ7L8J4 393 aa8.99□□□□□ -0.97
RAB28-207ENST00000511649 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
RAB28-207ENST00000511649 PNMA1Q8ND90 353 aa8.99□□□□□ -0.97
RAB28-207ENST00000511649 ZCRB1Q8TBF4 217 aaKnown RBP8.99□□□□□ -0.97
RAB28-207ENST00000511649 TOR4AQ9NXH8 423 aa8.99□□□□□ -0.97
RAB28-207ENST00000511649 KIAA1551Q9HCM1 1747 aa8.98□□□□□ -0.97
RAB28-207ENST00000511649 VARSP26640 1264 aaKnown RBP8.98□□□□□ -0.97
RAB28-207ENST00000511649 MCM6Q14566 821 aa8.98□□□□□ -0.97
RAB28-207ENST00000511649 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
RAB28-207ENST00000511649 BPHLQ86WA6 291 aaPredicted RBP8.98□□□□□ -0.97
RAB28-207ENST00000511649 CYP4X1Q8N118 509 aa8.98□□□□□ -0.97
RAB28-207ENST00000511649 NLGN2Q8NFZ4 835 aa8.98□□□□□ -0.97
RAB28-207ENST00000511649 SMG6Q86US8 1419 aaKnown RBP8.97□□□□□ -0.97
RAB28-207ENST00000511649 APBB1O00213 710 aa8.97□□□□□ -0.97
RAB28-207ENST00000511649 SIAH2O43255 324 aa8.97□□□□□ -0.97
RAB28-207ENST00000511649 AGERQ15109 404 aa8.97□□□□□ -0.97
RAB28-207ENST00000511649 COL23A1Q86Y22 540 aaPredicted RBP8.97□□□□□ -0.97
RAB28-207ENST00000511649 SYTL4Q96C24 671 aaPredicted RBP8.97□□□□□ -0.97
RAB28-207ENST00000511649 ZNF784Q8NCA9 323 aaPredicted RBP8.96□□□□□ -0.98
RAB28-207ENST00000511649 SNIP1Q8TAD8 396 aaKnown RBP8.96□□□□□ -0.98
RAB28-207ENST00000511649 ARXQ96QS3 562 aa8.96□□□□□ -0.98
RAB28-207ENST00000511649 POLKQ9UBT6 870 aa8.96□□□□□ -0.98
RAB28-207ENST00000511649 NDUFB9Q9Y6M9 179 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms