RNA–Protein interactions for RNA: ENST00000511049.5

CAST-234, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-234ENST00000511049 SMC3Q9UQE7 1217 aa9.15□□□□□ -0.94
CAST-234ENST00000511049 SOS2Q07890 1332 aaPredicted RBP9.15□□□□□ -0.94
CAST-234ENST00000511049 WTIPA6NIX2 430 aaPredicted RBP9.14□□□□□ -0.95
CAST-234ENST00000511049 XRCC6P12956 609 aaKnown RBP eCLIP9.14□□□□□ -0.95
CAST-234ENST00000511049 IFIT5Q13325 482 aaKnown RBP9.14□□□□□ -0.95
CAST-234ENST00000511049 FBXW7Q969H0 707 aa9.14□□□□□ -0.95
CAST-234ENST00000511049 LSG1Q9H089 658 aaKnown RBP9.14□□□□□ -0.95
CAST-234ENST00000511049 SYCE3A1L190 88 aa9.14□□□□□ -0.95
CAST-234ENST00000511049 EIF5BO60841 1220 aaKnown RBP9.14□□□□□ -0.95
CAST-234ENST00000511049 TTC39AQ5SRH9 613 aa9.14□□□□□ -0.95
CAST-234ENST00000511049 HDAC5Q9UQL6 1122 aa9.14□□□□□ -0.95
CAST-234ENST00000511049 CREB3L3Q68CJ9 461 aa9.14□□□□□ -0.95
CAST-234ENST00000511049 RUFY3Q7L099 469 aa9.14□□□□□ -0.95
CAST-234ENST00000511049 ZDHHC9Q9Y397 364 aa9.14□□□□□ -0.95
CAST-234ENST00000511049 CYP46A1Q9Y6A2 500 aa9.14□□□□□ -0.95
CAST-234ENST00000511049 PCNTO95613 3336 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 HSPA4P34932 840 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 SCARF1Q14162 830 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 SEC31BQ9NQW1 1179 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 IRS4O14654 1257 aaPredicted RBP9.13□□□□□ -0.95
CAST-234ENST00000511049 GADD45BO75293 160 aaPredicted RBP9.13□□□□□ -0.95
CAST-234ENST00000511049 ITGA6P23229 1130 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.13□□□□□ -0.952e-7■■■□□ 16
CAST-234ENST00000511049 TFIP11Q9UBB9 837 aaKnown RBP9.13□□□□□ -0.95
CAST-234ENST00000511049 CNPY2Q9Y2B0 182 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 RAD50Q92878 1312 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 ERVV-2B6SEH9 535 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 RXRAP19793 462 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 LRP10Q7Z4F1 713 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 CCDC144CPQ8IYA2 1237 aa9.13□□□□□ -0.95
CAST-234ENST00000511049 CCDC171Q6TFL3 1326 aa9.12□□□□□ -0.95
CAST-234ENST00000511049 MARF1Q9Y4F3 1742 aaKnown RBP9.12□□□□□ -0.95
CAST-234ENST00000511049 GJB2P29033 226 aa9.12□□□□□ -0.95
CAST-234ENST00000511049 NUCB2P80303 420 aa9.12□□□□□ -0.95
CAST-234ENST00000511049 FOXO4P98177 505 aa9.12□□□□□ -0.95
CAST-234ENST00000511049 BLOC1S2Q6QNY1 142 aa9.12□□□□□ -0.95
CAST-234ENST00000511049 CCDC82Q8N4S0 544 aa9.12□□□□□ -0.95
CAST-234ENST00000511049 NCOA5Q9HCD5 579 aaKnown RBP9.12□□□□□ -0.95
CAST-234ENST00000511049 GPHNQ9NQX3 736 aaPredicted RBP9.12□□□□□ -0.95
CAST-234ENST00000511049 MEX3CQ5U5Q3 659 aaKnown RBP9.12□□□□□ -0.95
CAST-234ENST00000511049 PAG1Q9NWQ8 432 aa9.12□□□□□ -0.95
CAST-234ENST00000511049 NIP7Q9Y221 180 aaKnown RBP eCLIP9.12□□□□□ -0.95
CAST-234ENST00000511049 STRCP1A6NGW2 1772 aa9.12□□□□□ -0.95
CAST-234ENST00000511049 SLC27A2O14975 620 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 ME3Q16798 604 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 BRF1Q92994 677 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 INCENPQ9NQS7 918 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 ABCF2Q9UG63 623 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 TTC41PQ6P2S7 1318 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 JAK2O60674 1132 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 ZAP70P43403 619 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 TCIRG1Q13488 830 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 RRP12Q5JTH9 1297 aaKnown RBP9.11□□□□□ -0.95
CAST-234ENST00000511049 SLC51AQ86UW1 340 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 XAGE2Q96GT9 111 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 TPCN1Q9ULQ1 816 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 COL5A2P05997 1499 aaPredicted RBP9.11□□□□□ -0.95
CAST-234ENST00000511049 EYA2O00167 538 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 RFX5P48382 616 aaPredicted RBP9.11□□□□□ -0.95
CAST-234ENST00000511049 CAMK4Q16566 473 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 MPHOSPH8Q99549 860 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 LIMCH1Q9UPQ0 1083 aa9.11□□□□□ -0.95
CAST-234ENST00000511049 DNM1Q05193 864 aaKnown RBP9.1□□□□□ -0.95
CAST-234ENST00000511049 CCDC158Q5M9N0 1113 aa9.1□□□□□ -0.95
CAST-234ENST00000511049 ATG9AQ7Z3C6 839 aa9.1□□□□□ -0.95
CAST-234ENST00000511049 GRPEL1Q9HAV7 217 aa9.1□□□□□ -0.95
CAST-234ENST00000511049 MTMR7Q9Y216 660 aa9.1□□□□□ -0.95
CAST-234ENST00000511049 MTX1Q13505 466 aa9.1□□□□□ -0.95
CAST-234ENST00000511049 LARP1BQ659C4 914 aaKnown RBP9.1□□□□□ -0.95
CAST-234ENST00000511049 MARCH10Q8NA82 808 aaPredicted RBP9.1□□□□□ -0.95
CAST-234ENST00000511049 DENND2AQ9ULE3 1009 aa9.1□□□□□ -0.95
CAST-234ENST00000511049 SYT1P21579 422 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 CRKLP46109 303 aaKnown RBP9.09□□□□□ -0.95
CAST-234ENST00000511049 Q6ZUG5 572 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 MIGA1Q8NAN2 632 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 CCDC191Q8NCU4 936 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 GPT2Q8TD30 523 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 TRIM44Q96DX7 344 aaPredicted RBP9.09□□□□□ -0.95
CAST-234ENST00000511049 COPRSQ9NQ92 184 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 WWC3Q9ULE0 1092 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 ABCC6O95255 1503 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 H7C1W4 665 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 APOBRQ0VD83 1088 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 OTUD7BQ6GQQ9 843 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 XIRP1Q702N8 1843 aaKnown RBP9.09□□□□□ -0.95
CAST-234ENST00000511049 ATP2B3Q16720 1220 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 RNF20Q5VTR2 975 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 USP48Q86UV5 1035 aa9.09□□□□□ -0.95
CAST-234ENST00000511049 OVOS2A0A0G2JMS6 1433 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 NCAPD2Q15021 1401 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 LOC102724428A0A0B4J2F2 783 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 CYP21A2P08686 494 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 DDIT3P35638 169 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 SIK1P57059 783 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 SLC9C2Q5TAH2 1124 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 NLRP10Q86W26 655 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 SRP68Q9UHB9 627 aaKnown RBP9.08□□□□□ -0.96
CAST-234ENST00000511049 SLIT3O75094 1523 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 STX6O43752 255 aa9.08□□□□□ -0.96
CAST-234ENST00000511049 CYP19A1P11511 503 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms