RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 ADCY9O60503 1353 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 PATL2C9JE40 543 aaKnown RBP9.09□□□□□ -0.95
CAST-228ENST00000509903 GIGYF1O75420 1035 aaPredicted RBP9.09□□□□□ -0.95
CAST-228ENST00000509903 CD44P16070 742 aaKnown RBP9.09□□□□□ -0.95
CAST-228ENST00000509903 MCM2P49736 904 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 ANAPC15P60006 121 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 CLEC17AQ6ZS10 378 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 ZNF710Q8N1W2 664 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 C9orf78Q9NZ63 289 aaPredicted RBP9.09□□□□□ -0.95
CAST-228ENST00000509903 HDAC5Q9UQL6 1122 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 KIF1AQ12756 1690 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 PDE4CQ08493 712 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 UNC5CLQ8IV45 518 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 C19orf44Q9H6X5 657 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 AXIN2Q9Y2T1 843 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 MAP3K2Q9Y2U5 619 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 PCDHGA10Q9Y5H3 936 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 C1orf167Q5SNV9 1468 aa9.09□□□□□ -0.95
CAST-228ENST00000509903 ERBB3P21860 1342 aa9.08□□□□□ -0.96
CAST-228ENST00000509903 TRPM3Q9HCF6 1732 aaPredicted RBP9.08□□□□□ -0.96
CAST-228ENST00000509903 ALDH1L1O75891 902 aa9.08□□□□□ -0.96
CAST-228ENST00000509903 ZC3H6P61129 1189 aaKnown RBP9.08□□□□□ -0.96
CAST-228ENST00000509903 KSR2Q6VAB6 950 aa9.08□□□□□ -0.96
CAST-228ENST00000509903 FAM43AQ8N2R8 423 aa9.08□□□□□ -0.96
CAST-228ENST00000509903 ZGPATQ8N5A5 531 aaKnown RBP9.08□□□□□ -0.96
CAST-228ENST00000509903 RAPGEF4Q8WZA2 1011 aa9.08□□□□□ -0.96
CAST-228ENST00000509903 GRPEL1Q9HAV7 217 aa9.08□□□□□ -0.96
CAST-228ENST00000509903 DDX49Q9Y6V7 483 aaKnown RBP9.08□□□□□ -0.96
CAST-228ENST00000509903 DDX58O95786 925 aaKnown RBP9.07□□□□□ -0.96
CAST-228ENST00000509903 MCTP1Q6DN14 999 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 RSBN1LQ6PCB5 846 aaPredicted RBP9.07□□□□□ -0.96
CAST-228ENST00000509903 CNTROBQ8N137 903 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 MRRFQ96E11 262 aaKnown RBP9.07□□□□□ -0.96
CAST-228ENST00000509903 NLRP2Q9NX02 1062 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 HYPKQ9NX55 129 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 BOLA1Q9Y3E2 137 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 CAMTA1Q9Y6Y1 1673 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 MAP4K4O95819 1239 aaPredicted RBP9.07□□□□□ -0.96
CAST-228ENST00000509903 CYP2E1P05181 493 aaPredicted RBP9.07□□□□□ -0.96
CAST-228ENST00000509903 ATF3P18847 181 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 PROSER3Q2NL68 480 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 KLHL40Q2TBA0 621 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 PI4K2BQ8TCG2 481 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 TMX3Q96JJ7 454 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 PANK2Q9BZ23 570 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 PALD1Q9ULE6 856 aa9.07□□□□□ -0.96
CAST-228ENST00000509903 EPB41L2O43491 1005 aaKnown RBP9.06□□□□□ -0.96
CAST-228ENST00000509903 MTX1Q13505 466 aa9.06□□□□□ -0.96
CAST-228ENST00000509903 PKP1Q13835 747 aa9.06□□□□□ -0.96
CAST-228ENST00000509903 CLASRPQ8N2M8 674 aaKnown RBP9.06□□□□□ -0.96
CAST-228ENST00000509903 EPS8L1Q8TE68 723 aa9.06□□□□□ -0.96
CAST-228ENST00000509903 HEG1Q9ULI3 1381 aa9.06□□□□□ -0.96
CAST-228ENST00000509903 RBM47A0AV96 593 aaKnown RBP9.06□□□□□ -0.96
CAST-228ENST00000509903 PRAMEF22A3QJZ6 481 aa9.06□□□□□ -0.96
CAST-228ENST00000509903 GLRX3O76003 335 aaKnown RBP9.06□□□□□ -0.96
CAST-228ENST00000509903 CWF19L2Q2TBE0 894 aaKnown RBP9.06□□□□□ -0.96
CAST-228ENST00000509903 NOL8Q76FK4 1167 aaKnown RBP9.06□□□□□ -0.96
CAST-228ENST00000509903 ERC1Q8IUD2 1116 aa9.06□□□□□ -0.96
CAST-228ENST00000509903 PRR7Q8TB68 274 aa9.06□□□□□ -0.96
CAST-228ENST00000509903 GPATCH3Q96I76 525 aa9.06□□□□□ -0.96
CAST-228ENST00000509903 TRIM34Q9BYJ4 488 aa9.06□□□□□ -0.96
CAST-228ENST00000509903 DDX21Q9NR30 783 aaKnown RBP eCLIP9.06□□□□□ -0.96
CAST-228ENST00000509903 TTC41PQ6P2S7 1318 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 RGPD5Q99666 1765 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 LILRB3O75022 631 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 TATP17735 454 aaPredicted RBP9.05□□□□□ -0.96
CAST-228ENST00000509903 NCLP19338 710 aaKnown RBP9.05□□□□□ -0.96
CAST-228ENST00000509903 AIMP1Q12904 312 aaKnown RBP9.05□□□□□ -0.96
CAST-228ENST00000509903 PHLDB3Q6NSJ2 640 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 KIAA1211Q6ZU35 1233 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 LINS1Q8NG48 757 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 UPF3BQ9BZI7 483 aaKnown RBP9.05□□□□□ -0.96
CAST-228ENST00000509903 GRM8O00222 908 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 SPTLC1O15269 473 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 IFIT2P09913 472 aaKnown RBP9.05□□□□□ -0.96
CAST-228ENST00000509903 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 ALG2Q9H553 416 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 DIAPH3Q9NSV4 1193 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 SPG7Q9UQ90 795 aa9.05□□□□□ -0.96
CAST-228ENST00000509903 SIPA1L3O60292 1781 aaPredicted RBP9.04□□□□□ -0.96
CAST-228ENST00000509903 MST1RQ04912 1400 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 NPHP3Q7Z494 1330 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 RAD50Q92878 1312 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 SGSM2O43147 1006 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 HSPA4P34932 840 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 SCNN1AP37088 669 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 NEXNQ0ZGT2 675 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 DNAJC14Q6Y2X3 702 aaPredicted RBP9.04□□□□□ -0.96
CAST-228ENST00000509903 IL25Q9H293 177 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 SLC52A2Q9HAB3 445 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 ECHDC1Q9NTX5 307 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 USP42Q9H9J4 1324 aaKnown RBP9.04□□□□□ -0.96
CAST-228ENST00000509903 ALS2Q96Q42 1657 aa9.04□□□□□ -0.96
CAST-228ENST00000509903 SLC39A6Q13433 755 aa9.03□□□□□ -0.96
CAST-228ENST00000509903 CUL4AQ13619 759 aa9.03□□□□□ -0.96
CAST-228ENST00000509903 CWC27Q6UX04 472 aaKnown RBP9.03□□□□□ -0.96
CAST-228ENST00000509903 GAS2L3Q86XJ1 694 aa9.03□□□□□ -0.96
CAST-228ENST00000509903 RUFY2Q8WXA3 655 aa9.03□□□□□ -0.96
CAST-228ENST00000509903 IL17RAQ96F46 866 aa9.03□□□□□ -0.96
CAST-228ENST00000509903 INTS4Q96HW7 963 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms