RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 STAG2Q8N3U4 1231 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 ELOA3Q8NG57 546 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 HELQQ8TDG4 1101 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 MRRFQ96E11 262 aaKnown RBP3.06□□□□□ -1.92
SMN2-208ENST00000508258 SLC30A3Q99726 388 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 MKNK1Q9BUB5 465 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 BCL2L13Q9BXK5 485 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 UBE2OQ9C0C9 1292 aaKnown RBP3.06□□□□□ -1.92
SMN2-208ENST00000508258 KLF15Q9UIH9 416 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 DCTN4Q9UJW0 460 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 HCN2Q9UL51 889 aa3.06□□□□□ -1.92
SMN2-208ENST00000508258 SIN3BO75182 1162 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 COL8A1P27658 744 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 MAPK1P28482 360 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 ADH7P40394 386 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 HIRAP54198 1017 aaPredicted RBP3.05□□□□□ -1.92
SMN2-208ENST00000508258 TYRO3Q06418 890 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 NAA30Q147X3 362 aaPredicted RBP3.05□□□□□ -1.92
SMN2-208ENST00000508258 PRRT3Q5FWE3 981 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 BTLAQ7Z6A9 289 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 ALYREFQ86V81 257 aaKnown RBP3.05□□□□□ -1.92
SMN2-208ENST00000508258 RGL4Q8IZJ4 473 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 GIPC2Q8TF65 315 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 C2orf49Q9BVC5 232 aaPredicted RBP3.05□□□□□ -1.92
SMN2-208ENST00000508258 PLVAPQ9BX97 442 aa3.05□□□□□ -1.92
SMN2-208ENST00000508258 SPDYE3A6NKU9 549 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 C1QTNF9BB2RNN3 333 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 M0R082 166 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 IGSF3O75054 1194 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 FAM13AO94988 1023 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 EPB42P16452 691 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 HOXB4P17483 251 aaPredicted RBP3.04□□□□□ -1.92
SMN2-208ENST00000508258 TAGLNQ01995 201 aaKnown RBP3.04□□□□□ -1.92
SMN2-208ENST00000508258 RTN1Q16799 776 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 C8orf86Q6ZUL3 223 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 KRT25Q7Z3Z0 450 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 ZSCAN29Q8IWY8 852 aaPredicted RBP3.04□□□□□ -1.92
SMN2-208ENST00000508258 ZNF417Q8TAU3 575 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 ZNF587Q96SQ5 575 aaPredicted RBP3.04□□□□□ -1.92
SMN2-208ENST00000508258 RBCK1Q9BYM8 510 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 SAP130Q9H0E3 1048 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 KLK14Q9P0G3 267 aa3.04□□□□□ -1.92
SMN2-208ENST00000508258 FAM229AH3BQW9 127 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 TGFBR3LH3BV60 316 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 TNFRSF10BO14763 440 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 APBA3O96018 575 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 IGHA2P01877 340 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 PROCP04070 461 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 FURINP09958 794 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 NFKB1P19838 968 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 MPSTP25325 297 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 DGKZQ13574 1117 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 ZNF326Q5BKZ1 582 aaKnown RBP3.03□□□□□ -1.92
SMN2-208ENST00000508258 COX20Q5RI15 118 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 C16orf46Q6P387 395 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 TMC7Q7Z402 723 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 C7orf43Q8WVR3 580 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 TRIM11Q96F44 468 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 MYO19Q96H55 970 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 CITED4Q96RK1 184 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 JPH1Q9HDC5 661 aaPredicted RBP3.03□□□□□ -1.92
SMN2-208ENST00000508258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.03□□□□□ -1.92
SMN2-208ENST00000508258 STIM2Q9P246 746 aa3.03□□□□□ -1.92
SMN2-208ENST00000508258 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.03□□□□□ -1.92
SMN2-208ENST00000508258 ADARB2-AS1A8MUL3 147 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 K7ELQ4 463 aaPredicted RBP3.02□□□□□ -1.93
SMN2-208ENST00000508258 TREHO43280 583 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 FZD6O60353 706 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 LILRB5O75023 590 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 ALBP02768 609 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 ITGB2P05107 769 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 SPATA31C1P0DKV0 1188 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 CHRNA4P43681 627 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 BAG6P46379 1132 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 EIF1AXP47813 144 aaKnown RBP3.02□□□□□ -1.93
SMN2-208ENST00000508258 IDH3AP50213 366 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 FMR1Q06787 632 aaKnown RBP eCLIP3.02□□□□□ -1.93
SMN2-208ENST00000508258 TRIM28Q13263 835 aaKnown RBP3.02□□□□□ -1.93
SMN2-208ENST00000508258 CCINQ13939 588 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 DSC3Q14574 896 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 EAPPQ56P03 285 aaPredicted RBP3.02□□□□□ -1.93
SMN2-208ENST00000508258 FAM26DQ5JW98 314 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 TRAPPC3LQ5T215 181 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 CD163Q86VB7 1156 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 MICALL1Q8N3F8 863 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 NUDT8Q8WV74 236 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 TNFRSF25Q93038 417 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 QTRT2Q9H974 415 aaKnown RBP3.02□□□□□ -1.93
SMN2-208ENST00000508258 DNAJB12Q9NXW2 375 aaKnown RBP3.02□□□□□ -1.93
SMN2-208ENST00000508258 LRFN2Q9ULH4 789 aa3.02□□□□□ -1.93
SMN2-208ENST00000508258 LOC105371045A0A1W2PR82 267 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 ZBTB39O15060 712 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 ADAM23O75077 832 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 RGS9O75916 674 aaPredicted RBP3.01□□□□□ -1.93
SMN2-208ENST00000508258 RECKO95980 971 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 P4HBP07237 508 aaKnown RBP3.01□□□□□ -1.93
SMN2-208ENST00000508258 RARAP10276 462 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 CPB1P15086 417 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 TCF3P15923 654 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 ARSDP51689 593 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms