RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 SLC52A1Q9NWF4 448 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 ADGRB3O60242 1522 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 QRICH2Q9H0J4 1663 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 ZFYVE9O95405 1425 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 SENP3-EIF4A1A0A087X0R7 540 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 IGHDP01880 384 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 U2AF1L5P0DN76 240 aaPredicted RBP7.29□□□□□ -1.24
CLDND1-213ENST00000506927 SKIP12755 728 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 MTHFSP49914 203 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 U2AF1Q01081 240 aaKnown RBP eCLIP7.29□□□□□ -1.24
CLDND1-213ENST00000506927 MAP7D1Q3KQU3 841 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 TREML4Q6UXN2 200 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 ATF7IPQ6VMQ6 1270 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 HDGFL2Q7Z4V5 671 aaPredicted RBP7.29□□□□□ -1.24
CLDND1-213ENST00000506927 ARHGAP45Q92619 1136 aa7.29□□□□□ -1.24
CLDND1-213ENST00000506927 MEN1O00255 615 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 TERTO14746 1132 aaKnown RBP7.28□□□□□ -1.24
CLDND1-213ENST00000506927 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.28□□□□□ -1.24
CLDND1-213ENST00000506927 FOXD4L5Q5VV16 416 aaPredicted RBP7.28□□□□□ -1.24
CLDND1-213ENST00000506927 CASC1Q6TDU7 716 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 RNF217Q8TC41 542 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 PANK1Q8TE04 598 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 TRIM44Q96DX7 344 aaPredicted RBP7.28□□□□□ -1.24
CLDND1-213ENST00000506927 ARHGEF10LQ9HCE6 1279 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 RAB6BQ9NRW1 208 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 SMC4Q9NTJ3 1288 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 NXF1Q9UBU9 619 aaKnown RBP7.28□□□□□ -1.24
CLDND1-213ENST00000506927 IQSEC2Q5JU85 1478 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 MLH3Q9UHC1 1453 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 ZC3H13Q5T200 1668 aaKnown RBP7.28□□□□□ -1.24
CLDND1-213ENST00000506927 PPLO60437 1756 aa7.28□□□□□ -1.24
CLDND1-213ENST00000506927 ADGRF5Q8IZF2 1346 aa7.27□□□□□ -1.24
CLDND1-213ENST00000506927 WFS1O76024 890 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 GNRH1P01148 92 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 HSP90AA1P07900 732 aaKnown RBP7.27□□□□□ -1.25
CLDND1-213ENST00000506927 MCM4P33991 863 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 NFATC2IPQ8NCF5 419 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 GLMNQ92990 594 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 SIRT1Q96EB6 747 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 UCN2Q96RP3 112 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 KIF24Q5T7B8 1368 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 NOS1P29475 1434 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 ASXL2Q76L83 1435 aa7.27□□□□□ -1.25
CLDND1-213ENST00000506927 SHPRHQ149N8 1683 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 ADGRB2O60241 1585 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 HECW2Q9P2P5 1572 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 RBM25P49756 843 aaKnown RBP7.26□□□□□ -1.25
CLDND1-213ENST00000506927 VEGFBP49765 207 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 RNF144AP50876 292 aaPredicted RBP7.26□□□□□ -1.25
CLDND1-213ENST00000506927 NFX1Q12986 1120 aaKnown RBP7.26□□□□□ -1.25
CLDND1-213ENST00000506927 CLN3Q13286 438 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 TBC1D9Q6ZT07 1266 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 SMC5Q8IY18 1101 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 ANTXR1Q9H6X2 564 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 TRAK1Q9UPV9 953 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 ARHGAP31Q2M1Z3 1444 aa7.26□□□□□ -1.25
CLDND1-213ENST00000506927 DIAPH1O60610 1272 aaKnown RBP7.25□□□□□ -1.25
CLDND1-213ENST00000506927 STAU1O95793 577 aaKnown RBP7.25□□□□□ -1.25
CLDND1-213ENST00000506927 HSP90AB1P08238 724 aaKnown RBP7.25□□□□□ -1.25
CLDND1-213ENST00000506927 PTSQ03393 145 aa7.25□□□□□ -1.25
CLDND1-213ENST00000506927 NCOA4Q13772 614 aa7.25□□□□□ -1.25
CLDND1-213ENST00000506927 BMP2KLQ5H9B9 411 aa7.25□□□□□ -1.25
CLDND1-213ENST00000506927 PRICKLE2Q7Z3G6 844 aa7.25□□□□□ -1.25
CLDND1-213ENST00000506927 ITPRIPQ8IWB1 547 aa7.25□□□□□ -1.25
CLDND1-213ENST00000506927 DEPDC4Q8N2C3 294 aa7.25□□□□□ -1.25
CLDND1-213ENST00000506927 NLRP3Q96P20 1036 aa7.25□□□□□ -1.25
CLDND1-213ENST00000506927 API5Q9BZZ5 524 aaKnown RBP7.25□□□□□ -1.25
CLDND1-213ENST00000506927 PPRC1Q5VV67 1664 aaKnown RBP7.25□□□□□ -1.25
CLDND1-213ENST00000506927 USP19O94966 1318 aa7.25□□□□□ -1.25
CLDND1-213ENST00000506927 MROH1Q8NDA8 1641 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 USP17L5A8MUK1 530 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 IL2RAP01589 272 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 GPC1P35052 558 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 TMPOP42166 694 aaKnown RBP7.24□□□□□ -1.25
CLDND1-213ENST00000506927 GNAI1P63096 354 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 NUCB2P80303 420 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 NUCB1Q02818 461 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 EML3Q32P44 896 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
CLDND1-213ENST00000506927 LYSMD3Q7Z3D4 306 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 SLC16A10Q8TF71 515 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 CNKSR1Q969H4 720 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 CALR3Q96L12 384 aaKnown RBP7.24□□□□□ -1.25
CLDND1-213ENST00000506927 SLKQ9H2G2 1235 aaPredicted RBP7.24□□□□□ -1.25
CLDND1-213ENST00000506927 SLC12A5Q9H2X9 1139 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 CWC22Q9HCG8 908 aaKnown RBP7.24□□□□□ -1.25
CLDND1-213ENST00000506927 BRPF3Q9ULD4 1205 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 ANKRD26Q9UPS8 1709 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 NEO1Q92859 1461 aa7.24□□□□□ -1.25
CLDND1-213ENST00000506927 KIDINS220Q9ULH0 1771 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 FSD2A1L4K1 749 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 LZTS3O60299 673 aaPredicted RBP7.23□□□□□ -1.25
CLDND1-213ENST00000506927 SRPK2P78362 688 aaKnown RBP7.23□□□□□ -1.25
CLDND1-213ENST00000506927 SLC27A3Q5K4L6 730 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 NPAS3Q8IXF0 933 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 ESYT1Q9BSJ8 1104 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 CHMP4AQ9BY43 222 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 GRIP2Q9C0E4 1043 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 ZMYND15Q9H091 742 aa7.23□□□□□ -1.25
CLDND1-213ENST00000506927 ETNK1Q9HBU6 452 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms