RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 KINO60870 393 aaKnown RBP11.31□□□□□ -0.6
PHF3-208ENST00000506783 TYRO3Q06418 890 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 CSPP1Q1MSJ5 1256 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 CMTR1Q8N1G2 835 aaKnown RBP11.31□□□□□ -0.6
PHF3-208ENST00000506783 NEK1Q96PY6 1258 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 ZSWIM4Q9H7M6 989 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 CLIP2Q9UDT6 1046 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 JAG2Q9Y219 1238 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 IBTKQ9P2D0 1353 aaPredicted RBP11.31□□□□□ -0.6
PHF3-208ENST00000506783 ATP10DQ9P241 1426 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 ZNF771Q7L3S4 317 aaPredicted RBP11.31□□□□□ -0.6
PHF3-208ENST00000506783 GPIHBP1Q8IV16 184 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 C8orf37Q96NL8 207 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 PTPRMP28827 1452 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
PHF3-208ENST00000506783 GOLGA8FQ08AF8 430 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 GOLGA8DPQ0D2H9 430 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 STK38Q15208 465 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 EVI5LQ96CN4 794 aa11.31□□□□□ -0.6
PHF3-208ENST00000506783 hCG_1642624A0A1W2PR95 340 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 ZKSCAN3Q9BRR0 538 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 PUS3Q9BZE2 481 aaKnown RBP11.3□□□□□ -0.6
PHF3-208ENST00000506783 NPHP4O75161 1426 aaPredicted RBP11.3□□□□□ -0.6
PHF3-208ENST00000506783 PTCH1Q13635 1447 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 TTLL7Q6ZT98 887 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 MICU3Q86XE3 530 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 PDCL3Q9H2J4 239 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 INCENPQ9NQS7 918 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.3□□□□□ -0.6
PHF3-208ENST00000506783 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
PHF3-208ENST00000506783 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
PHF3-208ENST00000506783 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
PHF3-208ENST00000506783 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
PHF3-208ENST00000506783 TNNT1P13805 278 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
PHF3-208ENST00000506783 CCAR1Q8IX12 1150 aaKnown RBP11.29□□□□□ -0.6
PHF3-208ENST00000506783 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
PHF3-208ENST00000506783 FSIP1Q8NA03 581 aa11.29□□□□□ -0.6
PHF3-208ENST00000506783 RIOK3O14730 519 aaKnown RBP11.29□□□□□ -0.6
PHF3-208ENST00000506783 LRRC24Q50LG9 513 aa11.29□□□□□ -0.6
PHF3-208ENST00000506783 RALYLQ86SE5 291 aaKnown RBP11.29□□□□□ -0.6
PHF3-208ENST00000506783 ADGRB3O60242 1522 aa11.29□□□□□ -0.6
PHF3-208ENST00000506783 AP5Z1O43299 807 aa11.29□□□□□ -0.6
PHF3-208ENST00000506783 TOM1O60784 492 aa11.29□□□□□ -0.6
PHF3-208ENST00000506783 LMOD1P29536 600 aaPredicted RBP11.29□□□□□ -0.6
PHF3-208ENST00000506783 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
PHF3-208ENST00000506783 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
PHF3-208ENST00000506783 COBLO75128 1261 aa11.28□□□□□ -0.6
PHF3-208ENST00000506783 PDCL2Q8N4E4 241 aa11.28□□□□□ -0.6
PHF3-208ENST00000506783 CPLX3Q8WVH0 158 aa11.28□□□□□ -0.6
PHF3-208ENST00000506783 DBNLQ9UJU6 430 aaKnown RBP11.28□□□□□ -0.6
PHF3-208ENST00000506783 MYO3AQ8NEV4 1616 aa11.28□□□□□ -0.6
PHF3-208ENST00000506783 TTC39AQ5SRH9 613 aa11.27□□□□□ -0.6
PHF3-208ENST00000506783 KLHL10Q6JEL2 608 aa11.27□□□□□ -0.6
PHF3-208ENST00000506783 ZNF790Q6PG37 636 aa11.27□□□□□ -0.6
PHF3-208ENST00000506783 AOPEPQ8N6M6 819 aa11.27□□□□□ -0.6
PHF3-208ENST00000506783 CBX8Q9HC52 389 aa11.27□□□□□ -0.6
PHF3-208ENST00000506783 CNNM1Q9NRU3 951 aa11.27□□□□□ -0.6
PHF3-208ENST00000506783 BTG4Q9NY30 223 aa11.27□□□□□ -0.6
PHF3-208ENST00000506783 AIFM3Q96NN9 605 aa11.27□□□□□ -0.61
PHF3-208ENST00000506783 ABCF2Q9UG63 623 aa11.27□□□□□ -0.61
PHF3-208ENST00000506783 CCDC57Q2TAC2 916 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 LINS1Q8NG48 757 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 IP6K1Q92551 441 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 TBC1D2BQ9UPU7 963 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 ARHGEF40Q8TER5 1519 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 PDCP20941 246 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 ANAPC15P60006 121 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 PHKBQ93100 1093 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 CEP126Q9P2H0 1117 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 SHPRHQ149N8 1683 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 FAM170AA1A519 330 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 IGKV5-2P06315 115 aa11.26□□□□□ -0.61
PHF3-208ENST00000506783 CDK11BP21127 795 aaKnown RBP11.26□□□□□ -0.61
PHF3-208ENST00000506783 SBNO1A3KN83 1393 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 IGSF1Q8N6C5 1336 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 GOLGA8BA8MQT2 603 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 CYP21A2P08686 494 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 KCNQ4P56696 695 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 PPARDQ03181 441 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 CUL4AQ13619 759 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 AKAP4Q5JQC9 854 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 INTS4Q96HW7 963 aaKnown RBP11.25□□□□□ -0.61
PHF3-208ENST00000506783 PTPDC1A2A3K4 754 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 LEO1Q8WVC0 666 aaPredicted RBP11.25□□□□□ -0.61
PHF3-208ENST00000506783 EEF2KMTQ96G04 330 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 OSBPL3Q9H4L5 887 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 DENND2AQ9ULE3 1009 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 GTF2E1P29083 439 aaPredicted RBP11.25□□□□□ -0.61
PHF3-208ENST00000506783 CCDC112Q8NEF3 446 aa11.25□□□□□ -0.61
PHF3-208ENST00000506783 KLF18A0A0U1RQI7 1052 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 TRDNQ13061 729 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms