RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 NOP53Q9NZM5 478 aaKnown RBP8.43□□□□□ -1.06
TRIO-208ENST00000506611 C1QTNF9BB2RNN3 333 aa8.42□□□□□ -1.06
TRIO-208ENST00000506611 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
TRIO-208ENST00000506611 MAP3K6O95382 1288 aa8.42□□□□□ -1.06
TRIO-208ENST00000506611 EPB42P16452 691 aa8.42□□□□□ -1.06
TRIO-208ENST00000506611 SUZ12Q15022 739 aaKnown RBP8.42□□□□□ -1.06
TRIO-208ENST00000506611 TRIP4Q15650 581 aaPredicted RBP8.42□□□□□ -1.06
TRIO-208ENST00000506611 PNMA5Q96PV4 448 aa8.42□□□□□ -1.06
TRIO-208ENST00000506611 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRIO-208ENST00000506611 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
TRIO-208ENST00000506611 EGFRP00533 1210 aa8.41□□□□□ -1.06
TRIO-208ENST00000506611 PLAURQ03405 335 aa8.41□□□□□ -1.06
TRIO-208ENST00000506611 C14orf37Q86TY3 774 aa8.41□□□□□ -1.06
TRIO-208ENST00000506611 NUDT8Q8WV74 236 aa8.41□□□□□ -1.06
TRIO-208ENST00000506611 SEPT3Q9UH03 358 aa8.41□□□□□ -1.06
TRIO-208ENST00000506611 ZBTB39O15060 712 aa8.4□□□□□ -1.06
TRIO-208ENST00000506611 ATP2B4P23634 1241 aa8.4□□□□□ -1.06
TRIO-208ENST00000506611 ILDR2Q71H61 639 aa8.4□□□□□ -1.06
TRIO-208ENST00000506611 DHX32Q7L7V1 743 aaKnown RBP8.4□□□□□ -1.06
TRIO-208ENST00000506611 CARNS1A5YM72 827 aa8.39□□□□□ -1.07
TRIO-208ENST00000506611 XYLBO75191 536 aa8.39□□□□□ -1.07
TRIO-208ENST00000506611 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
TRIO-208ENST00000506611 MLLT1Q03111 559 aaPredicted RBP8.39□□□□□ -1.07
TRIO-208ENST00000506611 PSAPL1Q6NUJ1 521 aa8.39□□□□□ -1.07
TRIO-208ENST00000506611 CMTR1Q8N1G2 835 aaKnown RBP8.39□□□□□ -1.07
TRIO-208ENST00000506611 TRPM4Q8TD43 1214 aa8.39□□□□□ -1.07
TRIO-208ENST00000506611 JPH1Q9HDC5 661 aaPredicted RBP8.39□□□□□ -1.07
TRIO-208ENST00000506611 C11orf16Q9NQ32 467 aa8.39□□□□□ -1.07
TRIO-208ENST00000506611 LILRB5O75023 590 aa8.38□□□□□ -1.07
TRIO-208ENST00000506611 PTCD1O75127 700 aaKnown RBP8.38□□□□□ -1.07
TRIO-208ENST00000506611 SPATA31C1P0DKV0 1188 aa8.38□□□□□ -1.07
TRIO-208ENST00000506611 RARAP10276 462 aa8.38□□□□□ -1.07
TRIO-208ENST00000506611 CPB1P15086 417 aa8.38□□□□□ -1.07
TRIO-208ENST00000506611 BRD2P25440 801 aaKnown RBP8.38□□□□□ -1.07
TRIO-208ENST00000506611 GRIK5Q16478 980 aa8.38□□□□□ -1.07
TRIO-208ENST00000506611 LPIN3Q9BQK8 851 aa8.38□□□□□ -1.07
TRIO-208ENST00000506611 BAG6P46379 1132 aa8.37□□□□□ -1.07
TRIO-208ENST00000506611 PERM1Q5SV97 790 aa8.37□□□□□ -1.07
TRIO-208ENST00000506611 FAM35AQ86V20 835 aa8.37□□□□□ -1.07
TRIO-208ENST00000506611 GPLD1P80108 840 aa8.36□□□□□ -1.07
TRIO-208ENST00000506611 HFE2Q6ZVN8 426 aa8.36□□□□□ -1.07
TRIO-208ENST00000506611 MMP20O60882 483 aa8.35□□□□□ -1.07
TRIO-208ENST00000506611 ZAP70P43403 619 aa8.35□□□□□ -1.07
TRIO-208ENST00000506611 GRIK4Q16099 956 aa8.35□□□□□ -1.07
TRIO-208ENST00000506611 TLR7Q9NYK1 1049 aaKnown RBP8.35□□□□□ -1.07
TRIO-208ENST00000506611 STIM2Q9P246 746 aa8.35□□□□□ -1.07
TRIO-208ENST00000506611 A0A0A0MRY4 1105 aa8.34□□□□□ -1.07
TRIO-208ENST00000506611 SSFA2P28290 1259 aa8.34□□□□□ -1.07
TRIO-208ENST00000506611 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
TRIO-208ENST00000506611 LOC100996750A0A140TA64 210 aa8.33□□□□□ -1.08
TRIO-208ENST00000506611 ADAM23O75077 832 aa8.33□□□□□ -1.08
TRIO-208ENST00000506611 PPP1R15AO75807 674 aaPredicted RBP8.33□□□□□ -1.08
TRIO-208ENST00000506611 RGS9O75916 674 aaPredicted RBP8.33□□□□□ -1.08
TRIO-208ENST00000506611 NRLP54845 237 aa8.33□□□□□ -1.08
TRIO-208ENST00000506611 ATCAYQ86WG3 371 aa8.33□□□□□ -1.08
TRIO-208ENST00000506611 KRTAP4-6Q9BYQ5 205 aa8.33□□□□□ -1.08
TRIO-208ENST00000506611 FRRS1LQ9P0K9 344 aa8.33□□□□□ -1.08
TRIO-208ENST00000506611 SPDYE3A6NKU9 549 aa8.32□□□□□ -1.08
TRIO-208ENST00000506611 J3QW42 95 aa8.32□□□□□ -1.08
TRIO-208ENST00000506611 FURINP09958 794 aa8.32□□□□□ -1.08
TRIO-208ENST00000506611 PRRT3Q5FWE3 981 aa8.32□□□□□ -1.08
TRIO-208ENST00000506611 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
TRIO-208ENST00000506611 DMRTC2Q8IXT2 367 aaPredicted RBP8.32□□□□□ -1.08
TRIO-208ENST00000506611 GPR152Q8TDT2 470 aa8.32□□□□□ -1.08
TRIO-208ENST00000506611 HOXD8P13378 290 aaPredicted RBP8.31□□□□□ -1.08
TRIO-208ENST00000506611 SELPP16109 830 aa8.31□□□□□ -1.08
TRIO-208ENST00000506611 TRIM28Q13263 835 aaKnown RBP8.31□□□□□ -1.08
TRIO-208ENST00000506611 PCSK7Q16549 785 aa8.31□□□□□ -1.08
TRIO-208ENST00000506611 COL13A1Q5TAT6 717 aaPredicted RBP8.31□□□□□ -1.08
TRIO-208ENST00000506611 NLRP13Q86W25 1043 aa8.31□□□□□ -1.08
TRIO-208ENST00000506611 HELQQ8TDG4 1101 aa8.31□□□□□ -1.08
TRIO-208ENST00000506611 NSUN5Q96P11 429 aaKnown RBP8.31□□□□□ -1.08
TRIO-208ENST00000506611 UBAP1LF5GYI3 381 aa8.3□□□□□ -1.08
TRIO-208ENST00000506611 SOX18P35713 384 aa8.3□□□□□ -1.08
TRIO-208ENST00000506611 MTMR3Q13615 1198 aa8.3□□□□□ -1.08
TRIO-208ENST00000506611 MSL1Q68DK7 614 aa8.3□□□□□ -1.08
TRIO-208ENST00000506611 ELMSAN1Q6PJG2 1045 aa8.3□□□□□ -1.08
TRIO-208ENST00000506611 SHISA2Q6UWI4 295 aa8.3□□□□□ -1.08
TRIO-208ENST00000506611 PIK3R5Q8WYR1 880 aa8.3□□□□□ -1.08
TRIO-208ENST00000506611 SMG9Q9H0W8 520 aaKnown RBP8.3□□□□□ -1.08
TRIO-208ENST00000506611 LOC102724428A0A0B4J2F2 783 aa8.29□□□□□ -1.08
TRIO-208ENST00000506611 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
TRIO-208ENST00000506611 ITGB7P26010 798 aa8.29□□□□□ -1.08
TRIO-208ENST00000506611 SIK1P57059 783 aa8.29□□□□□ -1.08
TRIO-208ENST00000506611 TTC9Q92623 222 aa8.29□□□□□ -1.08
TRIO-208ENST00000506611 PSAPP07602 524 aa8.28□□□□□ -1.08
TRIO-208ENST00000506611 DOC2BQ14184 412 aa8.28□□□□□ -1.08
TRIO-208ENST00000506611 FMR1NBQ8N0W7 255 aaPredicted RBP8.28□□□□□ -1.08
TRIO-208ENST00000506611 ABTB2Q8N961 1025 aa8.28□□□□□ -1.08
TRIO-208ENST00000506611 OR13H1Q8NG92 308 aa8.28□□□□□ -1.08
TRIO-208ENST00000506611 GTF3C2Q8WUA4 911 aaPredicted RBP8.28□□□□□ -1.08
TRIO-208ENST00000506611 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.28□□□□□ -1.08
TRIO-208ENST00000506611 ELNP15502 786 aa8.27□□□□□ -1.09
TRIO-208ENST00000506611 GATA4P43694 442 aa8.27□□□□□ -1.09
TRIO-208ENST00000506611 ADAMTSL4Q6UY14 1074 aa8.27□□□□□ -1.09
TRIO-208ENST00000506611 PLD4Q96BZ4 506 aa8.27□□□□□ -1.09
TRIO-208ENST00000506611 NUDT16Q96DE0 195 aaKnown RBP8.27□□□□□ -1.09
TRIO-208ENST00000506611 TMEM63CQ9P1W3 806 aa8.27□□□□□ -1.09
TRIO-208ENST00000506611 K7ELQ4 463 aaPredicted RBP8.26□□□□□ -1.09
TRIO-208ENST00000506611 DEAF1O75398 565 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms