RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 ACBD3Q9H3P7 528 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 AXIN2Q9Y2T1 843 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 PXDNLA1KZ92 1463 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 KIF3BO15066 747 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 KCNA6P17658 529 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 ARID5BQ14865 1188 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 FAM9BQ8IZU0 186 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 HELBQ8NG08 1087 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-205ENST00000506154 PARP3Q9Y6F1 533 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 UBR3Q6ZT12 1888 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 MARSP56192 900 aaKnown RBP2.83□□□□□ -1.96
NEDD4-205ENST00000506154 MAP2K1Q02750 393 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-205ENST00000506154 TMTC2Q8N394 836 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 SERTAD1Q9UHV2 236 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 SEC24BO95487 1268 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 SLFN14P0C7P3 912 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 NCOA4Q13772 614 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 LRP10Q7Z4F1 713 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 NCAPGQ9BPX3 1015 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 SLAIN2Q9P270 581 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 MINK1Q8N4C8 1332 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-205ENST00000506154 ANAPC15P60006 121 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 PPP1R12CQ9BZL4 782 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 MRS2Q9HD23 443 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 MAP10Q9P2G4 905 aa2.83□□□□□ -1.96
NEDD4-205ENST00000506154 MAP3K11Q16584 847 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 PI16Q6UXB8 463 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 TMEM92Q6UXU6 159 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 METTL3Q86U44 580 aaKnown RBP2.82□□□□□ -1.96
NEDD4-205ENST00000506154 KCNN1Q92952 543 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 MED4Q9NPJ6 270 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 PNMA3Q9UL41 463 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 ZMIZ1Q9ULJ6 1067 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 DYNC1I1O14576 645 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 ZNF853P0CG23 659 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 AGERQ15109 404 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 HSP90AB3PQ58FF7 597 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 TMEM87AQ8NBN3 555 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 ANKRD7Q92527 254 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 DONSONQ9NYP3 566 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 BRD1O95696 1058 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 COL9A1P20849 921 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 PDE3BQ13370 1112 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 COL9A2Q14055 689 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-205ENST00000506154 GLYCTKQ8IVS8 523 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 TRAIPQ9BWF2 469 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 PNNQ9H307 717 aaKnown RBP2.82□□□□□ -1.96
NEDD4-205ENST00000506154 VRTNQ9H8Y1 702 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 RAB6BQ9NRW1 208 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 ARHGEF10O15013 1369 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 JCADQ9P266 1359 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 KDM2BQ8NHM5 1336 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 MYBP10242 640 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 ALDH1B1P30837 517 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 ITGAEP38570 1179 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 ATP2B3Q16720 1220 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 OXER1Q8TDS5 423 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 SEPT3Q9UH03 358 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 HSPA5P11021 654 aaKnown RBP2.82□□□□□ -1.96
NEDD4-205ENST00000506154 CREBRFQ8IUR6 639 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 RNF217Q8TC41 542 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 TATDN2Q93075 761 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 PBXIP1Q96AQ6 731 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 PRDM9Q9NQV7 894 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 COL15A1P39059 1388 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 VGLL3A8MV65 326 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 KIF12Q96FN5 646 aa2.82□□□□□ -1.96
NEDD4-205ENST00000506154 MMTAG2Q9BU76 263 aaKnown RBP2.82□□□□□ -1.96
NEDD4-205ENST00000506154 TEX13AQ9BXU3 409 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-205ENST00000506154 FAM217BQ9NTX9 383 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-205ENST00000506154 FEZ2Q9UHY8 353 aaPredicted RBP2.82□□□□□ -1.96
NEDD4-205ENST00000506154 CACNA1FO60840 1977 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 KDM6AO15550 1401 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-205ENST00000506154 ZNF16P17020 682 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-205ENST00000506154 CLEC17AQ6ZS10 378 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 JMYQ8N9B5 988 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 AGAP3Q96P47 875 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 KCNK17Q96T54 332 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 SMAD5Q99717 465 aaKnown RBP2.81□□□□□ -1.96
NEDD4-205ENST00000506154 UBXN6Q9BZV1 441 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 TANGO6Q9C0B7 1094 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 ZSWIM4Q9H7M6 989 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 ZHX1Q9UKY1 873 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-205ENST00000506154 CEP83Q9Y592 693 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 SYNRGQ9UMZ2 1314 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 RIC1Q4ADV7 1423 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 GUCY2CP25092 1073 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 CAMK2BQ13554 666 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 FBXW10Q5XX13 1052 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 CCDC81Q6ZN84 652 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 SND1Q7KZF4 910 aaKnown RBP eCLIP2.81□□□□□ -1.96
NEDD4-205ENST00000506154 TSEN2Q8NCE0 465 aaKnown RBP2.81□□□□□ -1.96
NEDD4-205ENST00000506154 MICAL1Q8TDZ2 1067 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 PIF1Q9H611 641 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 ST7Q9NRC1 585 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 PSME4Q14997 1843 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 IGSF1Q8N6C5 1336 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 MEGF6O75095 1541 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 TTLL13PA6NNM8 815 aa2.81□□□□□ -1.96
NEDD4-205ENST00000506154 NOM1Q5C9Z4 860 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms