RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 C8orf86Q6ZUL3 223 aa8.19□□□□□ -1.1
HMGCR-204ENST00000504466 RAB44Q7Z6P3 723 aaPredicted RBP8.19□□□□□ -1.1
HMGCR-204ENST00000504466 FAM196BA6NMK8 535 aa8.18□□□□□ -1.1
HMGCR-204ENST00000504466 IGFBP4P22692 258 aa8.18□□□□□ -1.1
HMGCR-204ENST00000504466 SRPK2P78362 688 aaKnown RBP8.18□□□□□ -1.1
HMGCR-204ENST00000504466 TRIM26Q12899 539 aaPredicted RBP8.18□□□□□ -1.1
HMGCR-204ENST00000504466 DOC2BQ14184 412 aa8.18□□□□□ -1.1
HMGCR-204ENST00000504466 LARP1Q6PKG0 1096 aaKnown RBP8.18□□□□□ -1.1
HMGCR-204ENST00000504466 ILDR2Q71H61 639 aa8.18□□□□□ -1.1
HMGCR-204ENST00000504466 BCS1LQ9Y276 419 aa8.18□□□□□ -1.1
HMGCR-204ENST00000504466 WDR62O43379 1518 aa8.18□□□□□ -1.1
HMGCR-204ENST00000504466 TGFBR3LH3BV60 316 aa8.17□□□□□ -1.1
HMGCR-204ENST00000504466 GSX2Q9BZM3 304 aa8.17□□□□□ -1.1
HMGCR-204ENST00000504466 ABCA5Q8WWZ7 1642 aa8.17□□□□□ -1.1
HMGCR-204ENST00000504466 DPYDQ12882 1025 aa8.16□□□□□ -1.1
HMGCR-204ENST00000504466 TRIM28Q13263 835 aaKnown RBP8.16□□□□□ -1.1
HMGCR-204ENST00000504466 NKAPLQ5M9Q1 402 aa8.16□□□□□ -1.1
HMGCR-204ENST00000504466 CARMIL1Q5VZK9 1371 aa8.16□□□□□ -1.1
HMGCR-204ENST00000504466 Q8N3U1 123 aa8.16□□□□□ -1.1
HMGCR-204ENST00000504466 THOC2Q8NI27 1593 aaKnown RBP8.16□□□□□ -1.1
HMGCR-204ENST00000504466 BHMTQ93088 406 aa8.16□□□□□ -1.1
HMGCR-204ENST00000504466 APBA3O96018 575 aa8.15□□□□□ -1.1
HMGCR-204ENST00000504466 RSPO4Q2I0M5 234 aaPredicted RBP8.15□□□□□ -1.1
HMGCR-204ENST00000504466 ANKMY2Q8IV38 441 aa8.15□□□□□ -1.1
HMGCR-204ENST00000504466 CHMP7Q8WUX9 453 aaPredicted RBP8.15□□□□□ -1.1
HMGCR-204ENST00000504466 NACC1Q96RE7 527 aa8.15□□□□□ -1.1
HMGCR-204ENST00000504466 C11orf16Q9NQ32 467 aa8.15□□□□□ -1.1
HMGCR-204ENST00000504466 SLC6A14Q9UN76 642 aa8.15□□□□□ -1.1
HMGCR-204ENST00000504466 TDRD9Q8NDG6 1382 aaKnown RBP8.14□□□□□ -1.11
HMGCR-204ENST00000504466 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L15C9J2P7 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L10C9JJH3 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L13C9JLJ4 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L12C9JPN9 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L11C9JVI0 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L21D6R901 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L18D6R9N7 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L22D6RA61 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L17D6RBQ6 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L19D6RCP7 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L20D6RJB6 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 FAM229AH3BQW9 127 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 LILRB5O75023 590 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 GRNP28799 593 aaKnown RBP8.14□□□□□ -1.11
HMGCR-204ENST00000504466 USP17L24Q0WX57 530 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 NGLY1Q96IV0 654 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 HINFPQ9BQA5 517 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 SEMA6BQ9H3T3 888 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 PODXL2Q9NZ53 605 aa8.14□□□□□ -1.11
HMGCR-204ENST00000504466 CLIP1P30622 1438 aa8.13□□□□□ -1.11
HMGCR-204ENST00000504466 ATG7O95352 703 aa8.13□□□□□ -1.11
HMGCR-204ENST00000504466 WEE1P30291 646 aa8.13□□□□□ -1.11
HMGCR-204ENST00000504466 INPP5BP32019 993 aa8.13□□□□□ -1.11
HMGCR-204ENST00000504466 CCINQ13939 588 aa8.13□□□□□ -1.11
HMGCR-204ENST00000504466 VRTNQ9H8Y1 702 aa8.13□□□□□ -1.11
HMGCR-204ENST00000504466 TPSG1Q9NRR2 321 aa8.13□□□□□ -1.11
HMGCR-204ENST00000504466 USTQ9Y2C2 406 aa8.13□□□□□ -1.11
HMGCR-204ENST00000504466 GAPVD1Q14C86 1478 aa8.13□□□□□ -1.11
HMGCR-204ENST00000504466 CUL7Q14999 1698 aa8.12□□□□□ -1.11
HMGCR-204ENST00000504466 MAP3K6O95382 1288 aa8.12□□□□□ -1.11
HMGCR-204ENST00000504466 CDCA8Q53HL2 280 aa8.12□□□□□ -1.11
HMGCR-204ENST00000504466 UBE2OQ9C0C9 1292 aaKnown RBP8.12□□□□□ -1.11
HMGCR-204ENST00000504466 DNAJB12Q9NXW2 375 aaKnown RBP8.12□□□□□ -1.11
HMGCR-204ENST00000504466 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.12□□□□□ -1.11
HMGCR-204ENST00000504466 A0A0A0MRY4 1105 aa8.11□□□□□ -1.11
HMGCR-204ENST00000504466 C9orf172C9J069 976 aa8.11□□□□□ -1.11
HMGCR-204ENST00000504466 ELNP15502 786 aa8.11□□□□□ -1.11
HMGCR-204ENST00000504466 GRIK4Q16099 956 aa8.11□□□□□ -1.11
HMGCR-204ENST00000504466 MYO19Q96H55 970 aa8.11□□□□□ -1.11
HMGCR-204ENST00000504466 NAGPAQ9UK23 515 aa8.11□□□□□ -1.11
HMGCR-204ENST00000504466 IFT140Q96RY7 1462 aa8.11□□□□□ -1.11
HMGCR-204ENST00000504466 FOXO3O43524 673 aa8.1□□□□□ -1.11
HMGCR-204ENST00000504466 SELPP16109 830 aa8.1□□□□□ -1.11
HMGCR-204ENST00000504466 AFF1P51825 1210 aaKnown RBP8.1□□□□□ -1.11
HMGCR-204ENST00000504466 ADGRE1Q14246 886 aa8.1□□□□□ -1.11
HMGCR-204ENST00000504466 TRAPPC3LQ5T215 181 aa8.1□□□□□ -1.11
HMGCR-204ENST00000504466 QTRT2Q9H974 415 aaKnown RBP8.1□□□□□ -1.11
HMGCR-204ENST00000504466 AQRO60306 1485 aaKnown RBP eCLIP8.1□□□□□ -1.113e-7■■■■■ 26.9
HMGCR-204ENST00000504466 ERCC6Q03468 1493 aa8.1□□□□□ -1.11
HMGCR-204ENST00000504466 ZNF608Q9ULD9 1512 aaPredicted RBP8.09□□□□□ -1.11
HMGCR-204ENST00000504466 PBRM1Q86U86 1689 aa8.09□□□□□ -1.11
HMGCR-204ENST00000504466 ARAP1Q96P48 1450 aa8.09□□□□□ -1.11
HMGCR-204ENST00000504466 EPB42P16452 691 aa8.09□□□□□ -1.11
HMGCR-204ENST00000504466 NFKB1P19838 968 aa8.09□□□□□ -1.11
HMGCR-204ENST00000504466 PCSK7Q16549 785 aa8.09□□□□□ -1.11
HMGCR-204ENST00000504466 AEBP1Q8IUX7 1158 aa8.09□□□□□ -1.11
HMGCR-204ENST00000504466 LENG1Q96BZ8 264 aaPredicted RBP8.09□□□□□ -1.11
HMGCR-204ENST00000504466 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
HMGCR-204ENST00000504466 DYRK3O43781 588 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 IDH3AP50213 366 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 MBTPS1Q14703 1052 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 PSAPL1Q6NUJ1 521 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 TRPM4Q8TD43 1214 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 PNMA5Q96PV4 448 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 PCGF6Q9BYE7 350 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 KLK14Q9P0G3 267 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 FRRS1LQ9P0K9 344 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 VPS8Q8N3P4 1428 aa8.08□□□□□ -1.12
HMGCR-204ENST00000504466 ARHGAP35Q9NRY4 1499 aa8.07□□□□□ -1.12
HMGCR-204ENST00000504466 LGR5O75473 907 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms