RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 NBPF14Q5TI25 921 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 ICE2Q659A1 982 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 SOCS7O14512 581 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 KIF1CO43896 1103 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 MCM5P33992 734 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 ZNF827Q17R98 1081 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 CCDC30Q5VVM6 783 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 SCN7AQ01118 1682 aa11.58□□□□□ -0.56
PDLIM5-207ENST00000503974 RPS6KA4O75676 772 aa11.57□□□□□ -0.56
PDLIM5-207ENST00000503974 A1BGP04217 495 aa11.57□□□□□ -0.56
PDLIM5-207ENST00000503974 EIF2S2P20042 333 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-207ENST00000503974 ARID4AP29374 1257 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-207ENST00000503974 IL6STP40189 918 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-207ENST00000503974 ALDH1L2Q3SY69 923 aa11.57□□□□□ -0.56
PDLIM5-207ENST00000503974 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
PDLIM5-207ENST00000503974 OGFRQ9NZT2 677 aa11.57□□□□□ -0.56
PDLIM5-207ENST00000503974 DBF4Q9UBU7 674 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-207ENST00000503974 CCDC189A1A4V9 331 aa11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 EIF5P55010 431 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 C8orf34Q49A92 452 aa11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 CASC1Q6TDU7 716 aa11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 GAS2L3Q86XJ1 694 aa11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 EXOC6Q8TAG9 804 aa11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 CHPF2Q9P2E5 772 aa11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 RSPH14Q9UHP6 348 aa11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 SLC15A2Q16348 729 aa11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 CASZ1Q86V15 1759 aa11.56□□□□□ -0.56
PDLIM5-207ENST00000503974 COL15A1P39059 1388 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 GNPATO15228 680 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 ADRA2BP18089 450 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 SSFA2P28290 1259 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 CCDC96Q2M329 555 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 PROSER3Q2NL68 480 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 AMIGO3Q86WK7 504 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 SSH1Q8WYL5 1049 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 AK7Q96M32 723 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 RAD50Q92878 1312 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 PRIMPOLQ96LW4 560 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 HYPKQ9NX55 129 aa11.55□□□□□ -0.56
PDLIM5-207ENST00000503974 PIP4K2AP48426 406 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 PDCL2Q8N4E4 241 aa11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 ZNF513Q8N8E2 541 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 STK31Q9BXU1 1019 aa11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 MED4Q9NPJ6 270 aa11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 STK32BQ9NY57 414 aa11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 RTCBQ9Y3I0 505 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 COL24A1Q17RW2 1714 aa11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 PNPLA7Q6ZV29 1317 aa11.54□□□□□ -0.56
PDLIM5-207ENST00000503974 TDO2P48775 406 aa11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 HMGN5P82970 282 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 TERF2Q15554 542 aa11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 ITFG2Q969R8 447 aa11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 CALR3Q96L12 384 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 SLKQ9H2G2 1235 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 ARFGEF2Q9Y6D5 1785 aa11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 N4BP2Q86UW6 1770 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 RGL2O15211 777 aa11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 ANXA1P04083 346 aa11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 FLAD1Q8NFF5 587 aa11.53□□□□□ -0.56
PDLIM5-207ENST00000503974 A0A087WZG4 1122 aa11.52□□□□□ -0.57
PDLIM5-207ENST00000503974 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
PDLIM5-207ENST00000503974 MYL6BP14649 208 aa11.52□□□□□ -0.57
PDLIM5-207ENST00000503974 DNAJC21Q5F1R6 531 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-207ENST00000503974 TMTC2Q8N394 836 aa11.52□□□□□ -0.57
PDLIM5-207ENST00000503974 MNS1Q8NEH6 495 aa11.52□□□□□ -0.57
PDLIM5-207ENST00000503974 ZKSCAN5Q9Y2L8 839 aa11.52□□□□□ -0.57
PDLIM5-207ENST00000503974 ANKRD36CQ5JPF3 1778 aa11.52□□□□□ -0.57
PDLIM5-207ENST00000503974 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 RBM25P49756 843 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 G2E3Q7L622 706 aa11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 UPF2Q9HAU5 1272 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 RCAN3Q9UKA8 241 aa11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 NUP98P52948 1817 aa11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 U2AF2P26368 475 aaKnown RBP eCLIP11.51□□□□□ -0.572e-9■■■■■ 29.5
PDLIM5-207ENST00000503974 FLIIQ13045 1269 aa11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 TRAPPC3LQ5T215 181 aa11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 XAGE3Q8WTP9 111 aa11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 JARID2Q92833 1246 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 USP42Q9H9J4 1324 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-207ENST00000503974 TTLL7Q6ZT98 887 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 SMIM5Q71RC9 77 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 COPS6Q7L5N1 327 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 DZIP3Q86Y13 1208 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 COL23A1Q86Y22 540 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 TSC1Q92574 1164 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 BCL2L13Q9BXK5 485 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 PTPRCP08575 1304 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 MAP3K15Q6ZN16 1313 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 ADCY9O60503 1353 aa11.5□□□□□ -0.57
PDLIM5-207ENST00000503974 ERVV-1B6SEH8 477 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms