RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 TOPAZ1Q8N9V7 1692 aa9.79□□□□□ -0.84
PTCD2-206ENST00000503315 COL14A1Q05707 1796 aaKnown RBP9.78□□□□□ -0.84
PTCD2-206ENST00000503315 P4HBP07237 508 aaKnown RBP9.78□□□□□ -0.84
PTCD2-206ENST00000503315 OXLD1Q5BKU9 147 aa9.78□□□□□ -0.84
PTCD2-206ENST00000503315 MORN1Q5T089 497 aa9.78□□□□□ -0.84
PTCD2-206ENST00000503315 SLC43A3Q8NBI5 491 aa9.78□□□□□ -0.84
PTCD2-206ENST00000503315 TPCN2Q8NHX9 752 aa9.78□□□□□ -0.84
PTCD2-206ENST00000503315 RNF34Q969K3 372 aa9.78□□□□□ -0.84
PTCD2-206ENST00000503315 USB1Q9BQ65 265 aaKnown RBP9.78□□□□□ -0.84
PTCD2-206ENST00000503315 TGIF2Q9GZN2 237 aa9.78□□□□□ -0.84
PTCD2-206ENST00000503315 CAPN10Q9HC96 672 aa9.78□□□□□ -0.84
PTCD2-206ENST00000503315 METTL5Q9NRN9 209 aaKnown RBP9.78□□□□□ -0.84
PTCD2-206ENST00000503315 MAP10Q9P2G4 905 aa9.78□□□□□ -0.84
PTCD2-206ENST00000503315 SEPT3Q9UH03 358 aa9.78□□□□□ -0.84
PTCD2-206ENST00000503315 FAM13AO94988 1023 aa9.77□□□□□ -0.85
PTCD2-206ENST00000503315 PTPRNQ16849 979 aa9.77□□□□□ -0.85
PTCD2-206ENST00000503315 TMC1Q8TDI8 760 aa9.77□□□□□ -0.85
PTCD2-206ENST00000503315 ARMC5Q96C12 935 aa9.77□□□□□ -0.85
PTCD2-206ENST00000503315 RBCK1Q9BYM8 510 aa9.77□□□□□ -0.85
PTCD2-206ENST00000503315 LNPKQ9C0E8 428 aa9.77□□□□□ -0.85
PTCD2-206ENST00000503315 KIAA1024Q9UPX6 916 aa9.77□□□□□ -0.85
PTCD2-206ENST00000503315 SLC27A5Q9Y2P5 690 aa9.77□□□□□ -0.85
PTCD2-206ENST00000503315 POLR3AO14802 1390 aaPredicted RBP9.77□□□□□ -0.85
PTCD2-206ENST00000503315 SRCAPQ6ZRS2 3230 aa9.76□□□□□ -0.85
PTCD2-206ENST00000503315 SFI1A8K8P3 1242 aa9.76□□□□□ -0.85
PTCD2-206ENST00000503315 ZBTB7BO15156 539 aaPredicted RBP9.76□□□□□ -0.85
PTCD2-206ENST00000503315 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTCD2-206ENST00000503315 ZEB1P37275 1124 aaPredicted RBP9.76□□□□□ -0.85
PTCD2-206ENST00000503315 NBPF8Q3BBV2 869 aa9.76□□□□□ -0.85
PTCD2-206ENST00000503315 SEPT12Q8IYM1 358 aa9.76□□□□□ -0.85
PTCD2-206ENST00000503315 KCNK17Q96T54 332 aa9.76□□□□□ -0.85
PTCD2-206ENST00000503315 BTG4Q9NY30 223 aa9.76□□□□□ -0.85
PTCD2-206ENST00000503315 ACEP12821 1306 aa9.75□□□□□ -0.85
PTCD2-206ENST00000503315 QRICH2Q9H0J4 1663 aa9.75□□□□□ -0.85
PTCD2-206ENST00000503315 MTMR3Q13615 1198 aa9.75□□□□□ -0.85
PTCD2-206ENST00000503315 L3MBTL2Q969R5 705 aa9.75□□□□□ -0.85
PTCD2-206ENST00000503315 SIN3AQ96ST3 1273 aa9.75□□□□□ -0.85
PTCD2-206ENST00000503315 PHRF1Q9P1Y6 1649 aaKnown RBP9.75□□□□□ -0.85
PTCD2-206ENST00000503315 TRPM1Q7Z4N2 1603 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 SORBS3O60504 671 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 DKK1O94907 266 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 ATP2B2Q01814 1243 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 RAD51AP2Q09MP3 1159 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 ECM1Q16610 540 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 TMC7Q7Z402 723 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 ZBTB33Q86T24 672 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 DZIP3Q86Y13 1208 aaKnown RBP9.74□□□□□ -0.85
PTCD2-206ENST00000503315 HELQQ8TDG4 1101 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 TINF2Q9BSI4 451 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 VTI1BQ9UEU0 232 aa9.74□□□□□ -0.85
PTCD2-206ENST00000503315 TLDC2A0PJX2 215 aa9.73□□□□□ -0.85
PTCD2-206ENST00000503315 PRPF40AO75400 957 aaKnown RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 LDHBP07195 334 aaKnown RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 DHX38Q92620 1227 aaKnown RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 ARHGAP9Q9BRR9 750 aa9.73□□□□□ -0.85
PTCD2-206ENST00000503315 SEPT9Q9UHD8 586 aaPredicted RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 RABGEF1Q9UJ41 708 aa9.73□□□□□ -0.85
PTCD2-206ENST00000503315 CENPJQ9HC77 1338 aaPredicted RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 BLMP54132 1417 aaPredicted RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 FAM98CQ17RN3 349 aaKnown RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 PUS10Q3MIT2 529 aaKnown RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 RNF20Q5VTR2 975 aa9.73□□□□□ -0.85
PTCD2-206ENST00000503315 NOL8Q76FK4 1167 aaKnown RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 KRT27Q7Z3Y8 459 aa9.73□□□□□ -0.85
PTCD2-206ENST00000503315 ADAM32Q8TC27 787 aa9.73□□□□□ -0.85
PTCD2-206ENST00000503315 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
PTCD2-206ENST00000503315 CITED4Q96RK1 184 aa9.73□□□□□ -0.85
PTCD2-206ENST00000503315 PARP2Q9UGN5 583 aa9.73□□□□□ -0.85
PTCD2-206ENST00000503315 SPATA31A5Q5VU36 1347 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 SPATA31A7Q8IWB4 1347 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 JUNDP17535 347 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 ZNF76P36508 570 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 MAPK8P45983 427 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 FMR1Q06787 632 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTCD2-206ENST00000503315 PSMD2Q13200 908 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 SOGA3Q5TF21 947 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 NUTM2GQ5VZR2 741 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 COL26A1Q96A83 441 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
PTCD2-206ENST00000503315 IQSEC3Q9UPP2 1182 aaPredicted RBP9.72□□□□□ -0.85
PTCD2-206ENST00000503315 PPIP5K1Q6PFW1 1433 aa9.71□□□□□ -0.85
PTCD2-206ENST00000503315 TREHO43280 583 aa9.71□□□□□ -0.86
PTCD2-206ENST00000503315 PLCB3Q01970 1234 aa9.71□□□□□ -0.86
PTCD2-206ENST00000503315 NEUROD1Q13562 356 aa9.71□□□□□ -0.86
PTCD2-206ENST00000503315 CCDC144BQ3MJ40 725 aa9.71□□□□□ -0.86
PTCD2-206ENST00000503315 SAMD7Q7Z3H4 446 aa9.71□□□□□ -0.86
PTCD2-206ENST00000503315 METTL16Q86W50 562 aaKnown RBP9.71□□□□□ -0.86
PTCD2-206ENST00000503315 ABTB2Q8N961 1025 aa9.71□□□□□ -0.86
PTCD2-206ENST00000503315 PRDM11Q9NQV5 511 aa9.71□□□□□ -0.86
PTCD2-206ENST00000503315 KIAA0232Q92628 1395 aa9.71□□□□□ -0.86
PTCD2-206ENST00000503315 THSD7AQ9UPZ6 1657 aa9.71□□□□□ -0.86
PTCD2-206ENST00000503315 ACTN4O43707 911 aaKnown RBP9.7□□□□□ -0.86
PTCD2-206ENST00000503315 WEE1P30291 646 aa9.7□□□□□ -0.86
PTCD2-206ENST00000503315 USP4Q13107 963 aa9.7□□□□□ -0.86
PTCD2-206ENST00000503315 FKBP5Q13451 457 aaPredicted RBP9.7□□□□□ -0.86
PTCD2-206ENST00000503315 CHRNA2Q15822 529 aa9.7□□□□□ -0.86
PTCD2-206ENST00000503315 TMC4Q7Z404 712 aa9.7□□□□□ -0.86
PTCD2-206ENST00000503315 DEFB132Q7Z7B7 95 aa9.7□□□□□ -0.86
PTCD2-206ENST00000503315 DMRTB1Q96MA1 342 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms