RNA–Protein interactions for RNA: ENST00000502929.5

MATR3-232, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 4,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-232ENST00000502929 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
MATR3-232ENST00000502929 PAG1Q9NWQ8 432 aa9.66□□□□□ -0.86
MATR3-232ENST00000502929 ATP6V1DQ9Y5K8 247 aa9.66□□□□□ -0.86
MATR3-232ENST00000502929 UTYO14607 1347 aa9.66□□□□□ -0.86
MATR3-232ENST00000502929 USP54Q70EL1 1684 aa9.66□□□□□ -0.86
MATR3-232ENST00000502929 FAM184AQ8NB25 1140 aa9.66□□□□□ -0.86
MATR3-232ENST00000502929 FIBPO43427 364 aa9.66□□□□□ -0.86
MATR3-232ENST00000502929 NKX1-1Q15270 411 aaPredicted RBP9.66□□□□□ -0.86
MATR3-232ENST00000502929 CHAMP1Q96JM3 812 aa9.66□□□□□ -0.86
MATR3-232ENST00000502929 ZSCAN31Q96LW9 406 aaPredicted RBP9.66□□□□□ -0.86
MATR3-232ENST00000502929 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.66□□□□□ -0.86
MATR3-232ENST00000502929 SYAP1Q96A49 352 aaPredicted RBP9.66□□□□□ -0.86
MATR3-232ENST00000502929 IDH1O75874 414 aaKnown RBP9.65□□□□□ -0.86
MATR3-232ENST00000502929 MRE11P49959 708 aa9.65□□□□□ -0.86
MATR3-232ENST00000502929 ATP2B3Q16720 1220 aa9.65□□□□□ -0.86
MATR3-232ENST00000502929 SEC62Q99442 399 aaKnown RBP9.65□□□□□ -0.86
MATR3-232ENST00000502929 ALS2Q96Q42 1657 aa9.65□□□□□ -0.86
MATR3-232ENST00000502929 H3BQV1 296 aa9.65□□□□□ -0.86
MATR3-232ENST00000502929 KRT32Q14532 448 aa9.65□□□□□ -0.86
MATR3-232ENST00000502929 MCMDC2Q4G0Z9 681 aa9.65□□□□□ -0.86
MATR3-232ENST00000502929 IFFO2Q5TF58 517 aa9.65□□□□□ -0.86
MATR3-232ENST00000502929 HELBQ8NG08 1087 aaPredicted RBP9.65□□□□□ -0.86
MATR3-232ENST00000502929 TOMM22Q9NS69 142 aa9.65□□□□□ -0.86
MATR3-232ENST00000502929 MAP3K15Q6ZN16 1313 aa9.65□□□□□ -0.87
MATR3-232ENST00000502929 SLC27A2O14975 620 aa9.65□□□□□ -0.87
MATR3-232ENST00000502929 ANKRD1Q15327 319 aa9.65□□□□□ -0.87
MATR3-232ENST00000502929 HLFQ16534 295 aa9.65□□□□□ -0.87
MATR3-232ENST00000502929 FAM98CQ17RN3 349 aaKnown RBP9.65□□□□□ -0.87
MATR3-232ENST00000502929 ADCK5Q3MIX3 580 aa9.65□□□□□ -0.87
MATR3-232ENST00000502929 SYNE4Q8N205 404 aa9.65□□□□□ -0.87
MATR3-232ENST00000502929 U3KPZ7 1027 aaPredicted RBP9.65□□□□□ -0.87
MATR3-232ENST00000502929 ITGA6P23229 1130 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 LRRC2Q9BYS8 371 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 KDM3BQ7LBC6 1761 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 EPB41L2O43491 1005 aaKnown RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 PLCB2Q00722 1185 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 RABL6Q3YEC7 729 aaPredicted RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 LARP1BQ659C4 914 aaKnown RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 FERMT3Q86UX7 667 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 CDCA7Q9BWT1 371 aaPredicted RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 SH2B1Q9NRF2 756 aaPredicted RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 PCCAP05165 728 aaPredicted RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 GJB2P29033 226 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 FOXO4P98177 505 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 ZNF589Q86UQ0 364 aaPredicted RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 KBTBD3Q8NAB2 608 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 INTS4Q96HW7 963 aaKnown RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 GRPEL1Q9HAV7 217 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 STRCP1A6NGW2 1772 aa9.64□□□□□ -0.87
MATR3-232ENST00000502929 USP42Q9H9J4 1324 aaKnown RBP9.64□□□□□ -0.87
MATR3-232ENST00000502929 ZBTB38Q8NAP3 1195 aaPredicted RBP9.63□□□□□ -0.87
MATR3-232ENST00000502929 NEK1Q96PY6 1258 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 NIP7Q9Y221 180 aaKnown RBP eCLIP9.63□□□□□ -0.871e-323■■□□□ 14.4
MATR3-232ENST00000502929 RFX5P48382 616 aaPredicted RBP9.63□□□□□ -0.87
MATR3-232ENST00000502929 RUFY3Q7L099 469 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 RALYLQ86SE5 291 aaKnown RBP9.63□□□□□ -0.87
MATR3-232ENST00000502929 VSIG10Q8N0Z9 540 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 XAGE2Q96GT9 111 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.63□□□□□ -0.87
MATR3-232ENST00000502929 HMG20BQ9P0W2 317 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 MBD3O95983 291 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 HAND2P61296 217 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
MATR3-232ENST00000502929 STX6O43752 255 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 CSPP1Q1MSJ5 1256 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 KLHL40Q2TBA0 621 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 VPS53Q5VIR6 699 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 DDX11Q96FC9 970 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 HAUS7Q99871 368 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 CCDC87Q9NVE4 849 aa9.63□□□□□ -0.87
MATR3-232ENST00000502929 PHRF1Q9P1Y6 1649 aaKnown RBP9.62□□□□□ -0.87
MATR3-232ENST00000502929 IGHMBP2P38935 993 aaKnown RBP9.62□□□□□ -0.87
MATR3-232ENST00000502929 VPS37DQ86XT2 251 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 GREM2Q9H772 168 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 ADORA1P30542 326 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 TRDNQ13061 729 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 LRP10Q7Z4F1 713 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 NLRP10Q86W26 655 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 ISCA1Q9BUE6 129 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 ZNF652Q9Y2D9 606 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 CHGBP05060 677 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 PDCP20941 246 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 MAP4K1Q92918 833 aa9.62□□□□□ -0.87
MATR3-232ENST00000502929 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 PPFIA3O75145 1194 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 CYP19A1P11511 503 aaPredicted RBP9.61□□□□□ -0.87
MATR3-232ENST00000502929 SIK1P57059 783 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 SLFNL1Q499Z3 407 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 RNF214Q8ND24 703 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 PANK2Q9BZ23 570 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 PTMAP06454 111 aaKnown RBP9.61□□□□□ -0.87
MATR3-232ENST00000502929 KCNQ4P56696 695 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 BRF1Q92994 677 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 UTP14AQ9BVJ6 771 aaKnown RBP9.61□□□□□ -0.87
MATR3-232ENST00000502929 KIF3AQ9Y496 699 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 RNF113AO15541 343 aaKnown RBP9.61□□□□□ -0.87
MATR3-232ENST00000502929 PDE8AO60658 829 aa9.61□□□□□ -0.87
MATR3-232ENST00000502929 DDIT3P35638 169 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms