RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 DXOO77932 396 aaKnown RBP8.87□□□□□ -0.99
MED28-202ENST00000499786 TEFQ10587 303 aa8.87□□□□□ -0.99
MED28-202ENST00000499786 TMEM259Q4ZIN3 620 aa8.87□□□□□ -0.99
MED28-202ENST00000499786 AKAP4Q5JQC9 854 aa8.87□□□□□ -0.99
MED28-202ENST00000499786 ATF7IPQ6VMQ6 1270 aa8.87□□□□□ -0.99
MED28-202ENST00000499786 SSH1Q8WYL5 1049 aa8.87□□□□□ -0.99
MED28-202ENST00000499786 SPG7Q9UQ90 795 aa8.87□□□□□ -0.99
MED28-202ENST00000499786 PHLPP1O60346 1717 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 CHL1O00533 1208 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 JUNDP17535 347 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 CHRNA2Q15822 529 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 CENPQQ7L2Z9 268 aaPredicted RBP8.86□□□□□ -0.99
MED28-202ENST00000499786 ITPRIPQ8IWB1 547 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 BANK1Q8NDB2 785 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 PANK1Q8TE04 598 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 CLUAP1Q96AJ1 413 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 STK31Q9BXU1 1019 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 API5Q9BZZ5 524 aaKnown RBP8.86□□□□□ -0.99
MED28-202ENST00000499786 PRDM9Q9NQV7 894 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 DDX19BQ9UMR2 479 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 COG6Q9Y2V7 657 aa8.86□□□□□ -0.99
MED28-202ENST00000499786 VIRMAQ69YN4 1812 aaKnown RBP8.85□□□□□ -0.99
MED28-202ENST00000499786 COL22A1Q8NFW1 1626 aaPredicted RBP8.85□□□□□ -0.99
MED28-202ENST00000499786 CTDSPL2Q05D32 466 aa8.85□□□□□ -0.99
MED28-202ENST00000499786 MVPQ14764 893 aaKnown RBP8.85□□□□□ -0.99
MED28-202ENST00000499786 TAF7Q15545 349 aaPredicted RBP8.85□□□□□ -0.99
MED28-202ENST00000499786 LYPD8Q6UX82 237 aa8.85□□□□□ -0.99
MED28-202ENST00000499786 SLC6A16Q9GZN6 736 aa8.85□□□□□ -0.99
MED28-202ENST00000499786 NOB1Q9ULX3 412 aaKnown RBP8.85□□□□□ -0.99
MED28-202ENST00000499786 COL14A1Q05707 1796 aaKnown RBP8.85□□□□□ -0.99
MED28-202ENST00000499786 PKD1L3Q7Z443 1732 aa8.85□□□□□ -0.99
MED28-202ENST00000499786 WDR17Q8IZU2 1322 aa8.84□□□□□ -0.99
MED28-202ENST00000499786 COL5A2P05997 1499 aaPredicted RBP8.84□□□□□ -0.99
MED28-202ENST00000499786 ELL2O00472 640 aaPredicted RBP8.84□□□□□ -0.99
MED28-202ENST00000499786 TOM1O60784 492 aa8.84□□□□□ -0.99
MED28-202ENST00000499786 VAMP4O75379 141 aa8.84□□□□□ -0.99
MED28-202ENST00000499786 S1PR4O95977 384 aa8.84□□□□□ -0.99
MED28-202ENST00000499786 HSP90AB1P08238 724 aaKnown RBP8.84□□□□□ -0.99
MED28-202ENST00000499786 TRIM27P14373 513 aa8.84□□□□□ -0.99
MED28-202ENST00000499786 TOM1L2Q6ZVM7 507 aa8.84□□□□□ -0.99
MED28-202ENST00000499786 ARHGAP45Q92619 1136 aa8.84□□□□□ -0.99
MED28-202ENST00000499786 PLA2G2EQ9NZK7 142 aa8.84□□□□□ -0.99
MED28-202ENST00000499786 CEMIPQ8WUJ3 1361 aa8.84□□□□□ -0.99
MED28-202ENST00000499786 KDM3BQ7LBC6 1761 aa8.84□□□□□ -1
MED28-202ENST00000499786 PTPRCP08575 1304 aa8.83□□□□□ -1
MED28-202ENST00000499786 EVA1CP58658 441 aa8.83□□□□□ -1
MED28-202ENST00000499786 TSPYL6Q8N831 410 aa8.83□□□□□ -1
MED28-202ENST00000499786 C8orf58Q8NAV2 365 aa8.83□□□□□ -1
MED28-202ENST00000499786 MEGF6O75095 1541 aa8.83□□□□□ -1
MED28-202ENST00000499786 PCDH11XQ9BZA7 1347 aa8.82□□□□□ -1
MED28-202ENST00000499786 PCDH11YQ9BZA8 1340 aa8.82□□□□□ -1
MED28-202ENST00000499786 UBAP1LF5GYI3 381 aa8.82□□□□□ -1
MED28-202ENST00000499786 SOCS7O14512 581 aa8.82□□□□□ -1
MED28-202ENST00000499786 AP1G2O75843 785 aa8.82□□□□□ -1
MED28-202ENST00000499786 CCDC30Q5VVM6 783 aa8.82□□□□□ -1
MED28-202ENST00000499786 ADAMTS7Q9UKP4 1686 aa8.81□□□□□ -1
MED28-202ENST00000499786 SCN11AQ9UI33 1791 aa8.81□□□□□ -1
MED28-202ENST00000499786 COL16A1Q07092 1604 aaPredicted RBP8.81□□□□□ -1
MED28-202ENST00000499786 BTBD11A6QL63 1104 aa8.81□□□□□ -1
MED28-202ENST00000499786 RNMTO43148 476 aaKnown RBP8.81□□□□□ -1
MED28-202ENST00000499786 HOXB7P09629 217 aa8.81□□□□□ -1
MED28-202ENST00000499786 RLBP1P12271 317 aa8.81□□□□□ -1
MED28-202ENST00000499786 PTPRNQ16849 979 aa8.81□□□□□ -1
MED28-202ENST00000499786 PPP1R18Q6NYC8 613 aa8.81□□□□□ -1
MED28-202ENST00000499786 IFNL2Q8IZJ0 200 aa8.81□□□□□ -1
MED28-202ENST00000499786 RWDD1Q9H446 243 aaPredicted RBP8.81□□□□□ -1
MED28-202ENST00000499786 SNRKQ9NRH2 765 aa8.81□□□□□ -1
MED28-202ENST00000499786 STRN4Q9NRL3 753 aa8.81□□□□□ -1
MED28-202ENST00000499786 CACNA1FO60840 1977 aa8.81□□□□□ -1
MED28-202ENST00000499786 ABCC4O15439 1325 aa8.8□□□□□ -1
MED28-202ENST00000499786 RNF223E7ERA6 249 aa8.8□□□□□ -1
MED28-202ENST00000499786 TCERG1O14776 1098 aaKnown RBP8.8□□□□□ -1
MED28-202ENST00000499786 F12P00748 615 aaPredicted RBP8.8□□□□□ -1
MED28-202ENST00000499786 USP17L8P0C7I0 530 aa8.8□□□□□ -1
MED28-202ENST00000499786 PIP4K2BP78356 416 aa8.8□□□□□ -1
MED28-202ENST00000499786 HDGFL1Q5TGJ6 251 aa8.8□□□□□ -1
MED28-202ENST00000499786 MPRIPQ6WCQ1 1025 aa8.8□□□□□ -1
MED28-202ENST00000499786 TMEM57Q8N5G2 664 aa8.8□□□□□ -1
MED28-202ENST00000499786 IL17REQ8NFR9 667 aa8.8□□□□□ -1
MED28-202ENST00000499786 HELBQ8NG08 1087 aaPredicted RBP8.8□□□□□ -1
MED28-202ENST00000499786 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.8□□□□□ -1
MED28-202ENST00000499786 MIS18AQ9NYP9 233 aa8.8□□□□□ -1
MED28-202ENST00000499786 MRC1P22897 1456 aa8.8□□□□□ -1
MED28-202ENST00000499786 PLCH1Q4KWH8 1693 aa8.8□□□□□ -1
MED28-202ENST00000499786 SIPA1L3O60292 1781 aaPredicted RBP8.8□□□□□ -1
MED28-202ENST00000499786 KDM2BQ8NHM5 1336 aa8.8□□□□□ -1
MED28-202ENST00000499786 PXDNLA1KZ92 1463 aa8.79□□□□□ -1
MED28-202ENST00000499786 IL2RBP14784 551 aa8.79□□□□□ -1
MED28-202ENST00000499786 PHKG2P15735 406 aa8.79□□□□□ -1
MED28-202ENST00000499786 TTC5Q8N0Z6 440 aa8.79□□□□□ -1
MED28-202ENST00000499786 MTMR14Q8NCE2 650 aa8.79□□□□□ -1
MED28-202ENST00000499786 LRRN4Q8WUT4 740 aa8.79□□□□□ -1
MED28-202ENST00000499786 DCAF5Q96JK2 942 aa8.79□□□□□ -1
MED28-202ENST00000499786 CARD10Q9BWT7 1032 aa8.79□□□□□ -1
MED28-202ENST00000499786 EVA1BQ9NVM1 165 aa8.79□□□□□ -1
MED28-202ENST00000499786 TNNQ9UQP3 1299 aa8.79□□□□□ -1
MED28-202ENST00000499786 A0A0G2JS52 829 aa8.78□□□□□ -1
MED28-202ENST00000499786 PPEF1O14829 653 aaPredicted RBP8.78□□□□□ -1
MED28-202ENST00000499786 MCM6Q14566 821 aa8.78□□□□□ -1
MED28-202ENST00000499786 KRT24Q2M2I5 525 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms