RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TNP2Q05952 138 aa8.81□□□□□ -1
SSR3-208ENST00000496050 SFSWAPQ12872 951 aaKnown RBP8.81□□□□□ -1
SSR3-208ENST00000496050 DBN1Q16643 649 aa8.81□□□□□ -1
SSR3-208ENST00000496050 CCDC74AQ96AQ1 378 aa8.81□□□□□ -1
SSR3-208ENST00000496050 CFHR5Q9BXR6 569 aa8.81□□□□□ -1
SSR3-208ENST00000496050 EFCC1Q9HA90 598 aa8.81□□□□□ -1
SSR3-208ENST00000496050 TMEM63CQ9P1W3 806 aa8.81□□□□□ -1
SSR3-208ENST00000496050 VTI1BQ9UEU0 232 aa8.81□□□□□ -1
SSR3-208ENST00000496050 SCAMP3O14828 347 aaKnown RBP8.8□□□□□ -1
SSR3-208ENST00000496050 EFSO43281 561 aa8.8□□□□□ -1
SSR3-208ENST00000496050 SASH3O75995 380 aa8.8□□□□□ -1
SSR3-208ENST00000496050 TMEM87AQ8NBN3 555 aa8.8□□□□□ -1
SSR3-208ENST00000496050 IRX2Q9BZI1 471 aaPredicted RBP8.8□□□□□ -1
SSR3-208ENST00000496050 GSX2Q9BZM3 304 aa8.8□□□□□ -1
SSR3-208ENST00000496050 RNF19AQ9NV58 838 aa8.8□□□□□ -1
SSR3-208ENST00000496050 MARK1Q9P0L2 795 aa8.8□□□□□ -1
SSR3-208ENST00000496050 RECKO95980 971 aa8.79□□□□□ -1
SSR3-208ENST00000496050 MAPTP10636 758 aaKnown RBP8.79□□□□□ -1
SSR3-208ENST00000496050 CES1P23141 567 aa8.79□□□□□ -1
SSR3-208ENST00000496050 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.79□□□□□ -1
SSR3-208ENST00000496050 USPL1Q5W0Q7 1092 aa8.79□□□□□ -1
SSR3-208ENST00000496050 C1orf127Q8N9H9 656 aa8.79□□□□□ -1
SSR3-208ENST00000496050 TRIM47Q96LD4 638 aa8.79□□□□□ -1
SSR3-208ENST00000496050 PNMA5Q96PV4 448 aa8.79□□□□□ -1
SSR3-208ENST00000496050 CNTN3Q9P232 1028 aa8.79□□□□□ -1
SSR3-208ENST00000496050 DCDC2BA2VCK2 349 aa8.78□□□□□ -1
SSR3-208ENST00000496050 EIF4BP23588 611 aaKnown RBP8.78□□□□□ -1
SSR3-208ENST00000496050 TARSP26639 723 aaKnown RBP8.78□□□□□ -1
SSR3-208ENST00000496050 UBAP2LQ14157 1087 aaKnown RBP8.78□□□□□ -1
SSR3-208ENST00000496050 FOXR1Q6PIV2 292 aa8.78□□□□□ -1
SSR3-208ENST00000496050 PPP4R2Q9NY27 417 aa8.78□□□□□ -1
SSR3-208ENST00000496050 PHF24Q9UPV7 400 aa8.78□□□□□ -1
SSR3-208ENST00000496050 BNIP3LO60238 219 aa8.77□□□□□ -1.01
SSR3-208ENST00000496050 THBS1P07996 1170 aa8.77□□□□□ -1.01
SSR3-208ENST00000496050 GALNT12Q8IXK2 581 aa8.77□□□□□ -1.01
SSR3-208ENST00000496050 EPS8L3Q8TE67 593 aaKnown RBP8.77□□□□□ -1.01
SSR3-208ENST00000496050 EREGO14944 169 aa8.76□□□□□ -1.01
SSR3-208ENST00000496050 POLR3DP05423 398 aaPredicted RBP8.76□□□□□ -1.01
SSR3-208ENST00000496050 ITGA6P23229 1130 aa8.76□□□□□ -1.01
SSR3-208ENST00000496050 NEUROD1Q13562 356 aa8.76□□□□□ -1.01
SSR3-208ENST00000496050 KRT25Q7Z3Z0 450 aa8.76□□□□□ -1.01
SSR3-208ENST00000496050 CHRDQ9H2X0 955 aa8.76□□□□□ -1.01
SSR3-208ENST00000496050 NDFIP2Q9NV92 336 aa8.76□□□□□ -1.01
SSR3-208ENST00000496050 CUEDC1Q9NWM3 386 aaPredicted RBP8.76□□□□□ -1.01
SSR3-208ENST00000496050 GMPR2Q9P2T1 348 aaKnown RBP8.76□□□□□ -1.01
SSR3-208ENST00000496050 PHF20L1A8MW92 1017 aa8.75□□□□□ -1.01
SSR3-208ENST00000496050 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
SSR3-208ENST00000496050 RARAP10276 462 aa8.75□□□□□ -1.01
SSR3-208ENST00000496050 EDN3P14138 238 aa8.75□□□□□ -1.01
SSR3-208ENST00000496050 SPEM2Q0P670 501 aa8.75□□□□□ -1.01
SSR3-208ENST00000496050 GTPBP3Q969Y2 492 aaKnown RBP8.75□□□□□ -1.01
SSR3-208ENST00000496050 SRCIN1Q9C0H9 1055 aa8.75□□□□□ -1.01
SSR3-208ENST00000496050 STRN4Q9NRL3 753 aa8.75□□□□□ -1.01
SSR3-208ENST00000496050 ATXN7L1Q9ULK2 861 aaPredicted RBP8.75□□□□□ -1.01
SSR3-208ENST00000496050 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.75□□□□□ -1.01
SSR3-208ENST00000496050 MMP20O60882 483 aa8.74□□□□□ -1.01
SSR3-208ENST00000496050 PSAPP07602 524 aa8.74□□□□□ -1.01
SSR3-208ENST00000496050 LDLRAD1Q5T700 205 aa8.74□□□□□ -1.01
SSR3-208ENST00000496050 OR13H1Q8NG92 308 aa8.74□□□□□ -1.01
SSR3-208ENST00000496050 ABHD17AQ96GS6 310 aa8.74□□□□□ -1.01
SSR3-208ENST00000496050 TRERF1Q96PN7 1200 aa8.74□□□□□ -1.01
SSR3-208ENST00000496050 C12orf49Q9H741 205 aa8.74□□□□□ -1.01
SSR3-208ENST00000496050 METTL5Q9NRN9 209 aaKnown RBP8.74□□□□□ -1.01
SSR3-208ENST00000496050 TLR7Q9NYK1 1049 aaKnown RBP8.74□□□□□ -1.01
SSR3-208ENST00000496050 C11orf95C9JLR9 678 aaPredicted RBP8.73□□□□□ -1.01
SSR3-208ENST00000496050 MAP3K6O95382 1288 aa8.73□□□□□ -1.01
SSR3-208ENST00000496050 IRS1P35568 1242 aa8.73□□□□□ -1.01
SSR3-208ENST00000496050 FAM182BQ5T319 152 aa8.73□□□□□ -1.01
SSR3-208ENST00000496050 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
SSR3-208ENST00000496050 OSBPL7Q9BZF2 842 aa8.73□□□□□ -1.01
SSR3-208ENST00000496050 NPHS2Q9NP85 383 aa8.73□□□□□ -1.01
SSR3-208ENST00000496050 SNRPBP14678 240 aaKnown RBP8.72□□□□□ -1.01
SSR3-208ENST00000496050 NFKB1P19838 968 aa8.72□□□□□ -1.01
SSR3-208ENST00000496050 KIAA0319Q5VV43 1072 aa8.72□□□□□ -1.01
SSR3-208ENST00000496050 PI16Q6UXB8 463 aa8.72□□□□□ -1.01
SSR3-208ENST00000496050 BHMTQ93088 406 aa8.72□□□□□ -1.01
SSR3-208ENST00000496050 RNF34Q969K3 372 aa8.72□□□□□ -1.01
SSR3-208ENST00000496050 CRELD1Q96HD1 420 aa8.72□□□□□ -1.01
SSR3-208ENST00000496050 BCO2Q9BYV7 579 aa8.72□□□□□ -1.01
SSR3-208ENST00000496050 ZFATQ9P243 1243 aa8.72□□□□□ -1.01
SSR3-208ENST00000496050 FAM8A1Q9UBU6 413 aa8.72□□□□□ -1.01
SSR3-208ENST00000496050 PPFIA3O75145 1194 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 CYP2E1P05181 493 aaPredicted RBP8.71□□□□□ -1.02
SSR3-208ENST00000496050 CD33P20138 364 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 FGFR3P22607 806 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 SOX18P35713 384 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 PLAURQ03405 335 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 HYAL2Q12891 473 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 SV2AQ7L0J3 742 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 SUV39H2Q9H5I1 410 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 SALL4Q9UJQ4 1053 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 PRR12Q9ULL5 1215 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 TRAK1Q9UPV9 953 aa8.71□□□□□ -1.02
SSR3-208ENST00000496050 ERCC5P28715 1186 aaPredicted RBP8.7□□□□□ -1.02
SSR3-208ENST00000496050 ZNF76P36508 570 aa8.7□□□□□ -1.02
SSR3-208ENST00000496050 HDLBPQ00341 1268 aaKnown RBP8.7□□□□□ -1.02
SSR3-208ENST00000496050 NXPE4Q6UWF7 544 aa8.7□□□□□ -1.02
SSR3-208ENST00000496050 NCAPG2Q86XI2 1143 aa8.7□□□□□ -1.02
SSR3-208ENST00000496050 VWA5B2Q8N398 1253 aa8.7□□□□□ -1.02
SSR3-208ENST00000496050 SLC30A3Q99726 388 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms