RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
PRPF4B-209ENST00000494674 SCN7AQ01118 1682 aa12.9□□□□□ -0.34
PRPF4B-209ENST00000494674 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
PRPF4B-209ENST00000494674 IL15P40933 162 aaPredicted RBP12.9□□□□□ -0.34
PRPF4B-209ENST00000494674 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
PRPF4B-209ENST00000494674 DZIP3Q86Y13 1208 aaKnown RBP12.9□□□□□ -0.34
PRPF4B-209ENST00000494674 ZNF34Q8IZ26 560 aa12.9□□□□□ -0.34
PRPF4B-209ENST00000494674 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
PRPF4B-209ENST00000494674 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
PRPF4B-209ENST00000494674 RIC1Q4ADV7 1423 aa12.9□□□□□ -0.35
PRPF4B-209ENST00000494674 LY75O60449 1722 aa12.89□□□□□ -0.35
PRPF4B-209ENST00000494674 PUS3Q9BZE2 481 aaKnown RBP12.89□□□□□ -0.35
PRPF4B-209ENST00000494674 DIAPH3Q9NSV4 1193 aa12.89□□□□□ -0.35
PRPF4B-209ENST00000494674 TAF1LQ8IZX4 1826 aa12.89□□□□□ -0.35
PRPF4B-209ENST00000494674 ARAP2Q8WZ64 1704 aa12.89□□□□□ -0.35
PRPF4B-209ENST00000494674 RFX7Q2KHR2 1363 aa12.89□□□□□ -0.35
PRPF4B-209ENST00000494674 MED23Q9ULK4 1368 aa12.89□□□□□ -0.35
PRPF4B-209ENST00000494674 MCCP23508 829 aa12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 ST18O60284 1047 aa12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 CAMTA2O94983 1202 aa12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 NMIQ13287 307 aaPredicted RBP12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 CERKQ8TCT0 537 aa12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 EDC3Q96F86 508 aaKnown RBP12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 FAM227BQ96M60 508 aa12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 ARXQ96QS3 562 aa12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
PRPF4B-209ENST00000494674 MYH7P12883 1935 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 AKAP11Q9UKA4 1901 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 A0A0D9SFI3 127 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 A0A0G2JS52 829 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 PTH1RQ03431 593 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 PTF1AQ7RTS3 328 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 TTLL11Q8NHH1 800 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 RUFY2Q8WXA3 655 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 HAUS7Q99871 368 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 USP21Q9UK80 565 aa12.87□□□□□ -0.35
PRPF4B-209ENST00000494674 HIP1O00291 1037 aa12.86□□□□□ -0.35
PRPF4B-209ENST00000494674 NEK4P51957 841 aa12.86□□□□□ -0.35
PRPF4B-209ENST00000494674 CTSWP56202 376 aa12.86□□□□□ -0.35
PRPF4B-209ENST00000494674 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
PRPF4B-209ENST00000494674 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
PRPF4B-209ENST00000494674 KCNB2Q92953 911 aa12.86□□□□□ -0.35
PRPF4B-209ENST00000494674 SNX14Q9Y5W7 946 aa12.86□□□□□ -0.35
PRPF4B-209ENST00000494674 A0A1B0GUL6 1792 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 IRS4O14654 1257 aaPredicted RBP12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 TIMM10P62072 90 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 LINC00116Q8NCU8 138 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 CCDC85AQ96PX6 553 aaPredicted RBP12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 FSD1Q9BTV5 496 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 GREM2Q9H772 168 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 FOXD4L1Q9NU39 408 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 NDUFB9Q9Y6M9 179 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 CCDC171Q6TFL3 1326 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 A0A1B0GUL7 405 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 MYT1Q01538 1121 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 RAB3GAP1Q15042 981 aa12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 TRMT112Q9UI30 125 aaKnown RBP12.85□□□□□ -0.35
PRPF4B-209ENST00000494674 ATRNO75882 1429 aa12.84□□□□□ -0.35
PRPF4B-209ENST00000494674 COL4A1P02462 1669 aa12.84□□□□□ -0.35
PRPF4B-209ENST00000494674 IFIT5Q13325 482 aaKnown RBP12.84□□□□□ -0.35
PRPF4B-209ENST00000494674 SUSD4Q5VX71 490 aa12.84□□□□□ -0.35
PRPF4B-209ENST00000494674 KIAA1211Q6ZU35 1233 aa12.84□□□□□ -0.35
PRPF4B-209ENST00000494674 RIPOR2Q9Y4F9 1068 aa12.84□□□□□ -0.35
PRPF4B-209ENST00000494674 MYO5AQ9Y4I1 1855 aaKnown RBP12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 PDE8AO60658 829 aa12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 ITGA6P23229 1130 aa12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 HSPA1LP34931 641 aa12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 MAPK8IP2Q13387 824 aaPredicted RBP12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 NECTIN1Q15223 517 aa12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 ZNF589Q86UQ0 364 aaPredicted RBP12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 MAP4K1Q92918 833 aa12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 TTC14Q96N46 770 aa12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 UPF3BQ9BZI7 483 aaKnown RBP12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 C4AP0C0L4 1744 aa12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
PRPF4B-209ENST00000494674 CHGBP05060 677 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 HSP90AA1P07900 732 aaKnown RBP12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 MCM2P49736 904 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 VGLL2Q8N8G2 317 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 TMX3Q96JJ7 454 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 AK7Q96M32 723 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 NEUROD6Q96NK8 337 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 PLSCR2Q9NRY7 297 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 CEP126Q9P2H0 1117 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 CNTNAP4Q9C0A0 1308 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 LAMA4Q16363 1823 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 NTSR2O95665 410 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 CYP2E1P05181 493 aaPredicted RBP12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 ADORA1P30542 326 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 MCM4P33991 863 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 CUL4AQ13619 759 aa12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 DDX46Q7L014 1031 aaKnown RBP12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 ZGPATQ8N5A5 531 aaKnown RBP12.82□□□□□ -0.36
PRPF4B-209ENST00000494674 KBTBD3Q8NAB2 608 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms