RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 PSDA5PKW4 1024 aaPredicted RBP11.86□□□□□ -0.51
LINC00488-201ENST00000494582 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
LINC00488-201ENST00000494582 EVCP57679 992 aa11.86□□□□□ -0.51
LINC00488-201ENST00000494582 CEBPZQ03701 1054 aaKnown RBP11.86□□□□□ -0.51
LINC00488-201ENST00000494582 EP400NLQ6ZTU2 488 aa11.86□□□□□ -0.51
LINC00488-201ENST00000494582 IQUBQ8NA54 791 aa11.86□□□□□ -0.51
LINC00488-201ENST00000494582 NCAPGQ9BPX3 1015 aa11.86□□□□□ -0.51
LINC00488-201ENST00000494582 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
LINC00488-201ENST00000494582 BECN2A8MW95 431 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 ACTN2P35609 894 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 GPS2Q13227 327 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 TMC6Q7Z403 805 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 JAK2O60674 1132 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 URI1O94763 535 aaPredicted RBP11.85□□□□□ -0.51
LINC00488-201ENST00000494582 CAVIN2O95810 425 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 FRMPD1Q5SYB0 1578 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 ERCC6L2Q5T890 1561 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 NME9Q86XW9 330 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 KCNB2Q92953 911 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 EXOC4Q96A65 974 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 CDK19Q9BWU1 502 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 XPO4Q9C0E2 1151 aaKnown RBP11.85□□□□□ -0.51
LINC00488-201ENST00000494582 HDAC5Q9UQL6 1122 aa11.85□□□□□ -0.51
LINC00488-201ENST00000494582 ATP8B1O43520 1251 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 GSDMDP57764 484 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 RESTQ13127 1097 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 STK3Q13188 491 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 CTR9Q6PD62 1173 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 HOMER1Q86YM7 354 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 MNS1Q8NEH6 495 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 SLC26A8Q96RN1 970 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 CWC15Q9P013 229 aaKnown RBP11.84□□□□□ -0.51
LINC00488-201ENST00000494582 PPP6R1Q9UPN7 881 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 ATP7BP35670 1465 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 ADGRL3Q9HAR2 1447 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 SOS1Q07889 1333 aaPredicted RBP11.84□□□□□ -0.51
LINC00488-201ENST00000494582 PHLPP2Q6ZVD8 1323 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 A0A1B0GUL7 405 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 RAB11FIP3O75154 756 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 NECTIN1Q15223 517 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 CT47A1Q5JQC4 288 aaPredicted RBP11.84□□□□□ -0.51
LINC00488-201ENST00000494582 MYCBPQ99417 103 aaPredicted RBP11.84□□□□□ -0.51
LINC00488-201ENST00000494582 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 PSD3Q9NYI0 1048 aa11.84□□□□□ -0.51
LINC00488-201ENST00000494582 NEXMIFQ5QGS0 1516 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 RPGRIP1LQ68CZ1 1315 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 EFCAB8A8MWE9 144 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 GOLGA8FQ08AF8 430 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 GOLGA8DPQ0D2H9 430 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 E2F4Q16254 413 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 TTC31Q49AM3 519 aaPredicted RBP11.83□□□□□ -0.52
LINC00488-201ENST00000494582 GPATCH11Q8N954 259 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 PARD6BQ9BYG5 372 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 IFNKQ9P0W0 207 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
LINC00488-201ENST00000494582 LMTK2Q8IWU2 1503 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 EIF3CLB5ME19 914 aaKnown RBP11.83□□□□□ -0.52
LINC00488-201ENST00000494582 ADD1P35611 737 aaKnown RBP11.83□□□□□ -0.52
LINC00488-201ENST00000494582 AK7Q96M32 723 aa11.83□□□□□ -0.52
LINC00488-201ENST00000494582 EIF3CQ99613 913 aaKnown RBP11.83□□□□□ -0.52
LINC00488-201ENST00000494582 CRB1P82279 1406 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 N4BP1O75113 896 aaKnown RBP11.82□□□□□ -0.52
LINC00488-201ENST00000494582 ATP2B1P20020 1258 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 MAGEA9P43362 315 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 TOB2Q14106 344 aaPredicted RBP11.82□□□□□ -0.52
LINC00488-201ENST00000494582 PTPN21Q16825 1174 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
LINC00488-201ENST00000494582 CCAR1Q8IX12 1150 aaKnown RBP11.82□□□□□ -0.52
LINC00488-201ENST00000494582 CNTROBQ8N137 903 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 RHPN1Q8TCX5 695 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 CRYBG1Q9Y4K1 1723 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 SURF6O75683 361 aaKnown RBP11.82□□□□□ -0.52
LINC00488-201ENST00000494582 SMC2O95347 1197 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 PDCP20941 246 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 SFPQP23246 707 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC00488-201ENST00000494582 CREB3L3Q68CJ9 461 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 USP44Q9H0E7 712 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 BRMS1Q9HCU9 246 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 IMPACTQ9P2X3 320 aa11.82□□□□□ -0.52
LINC00488-201ENST00000494582 SULT6B1Q6IMI4 303 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 RSRC2Q7L4I2 434 aaKnown RBP11.81□□□□□ -0.52
LINC00488-201ENST00000494582 FAM177A1Q8N128 213 aaPredicted RBP11.81□□□□□ -0.52
LINC00488-201ENST00000494582 ENGASEQ8NFI3 743 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 WDR24Q96S15 920 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 RBM8AQ9Y5S9 174 aaKnown RBP11.81□□□□□ -0.52
LINC00488-201ENST00000494582 LONRF2Q1L5Z9 754 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 DPCR1Q3MIW9 517 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 CCDC150Q8NCX0 1101 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 BRF1Q92994 677 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 PLEKHA4Q9H4M7 779 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 ARFGAP3Q9NP61 516 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 VPS18Q9P253 973 aa11.81□□□□□ -0.52
LINC00488-201ENST00000494582 XRN1Q8IZH2 1706 aaKnown RBP11.81□□□□□ -0.52
LINC00488-201ENST00000494582 TTC41PQ6P2S7 1318 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 MAP2K7O14733 419 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 FOXO3O43524 673 aa11.8□□□□□ -0.52
LINC00488-201ENST00000494582 GIGYF1O75420 1035 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms