RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 OPLAHO14841 1288 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 BACH1O14867 736 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 HRO43593 1189 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 ALDH1L1O75891 902 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 FOSP01100 380 aaPredicted RBP8.74□□□□□ -1.01
SNX13-210ENST00000494402 MYCP01106 439 aaPredicted RBP8.74□□□□□ -1.01
SNX13-210ENST00000494402 CCNYL3P0C7X3 344 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 CD53P19397 219 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 LMOD3Q0VAK6 560 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 ORC1Q13415 861 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.74□□□□□ -1.01
SNX13-210ENST00000494402 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 ATCAYQ86WG3 371 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 CPLX3Q8WVH0 158 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 ZNF512BQ96KM6 892 aaPredicted RBP8.74□□□□□ -1.01
SNX13-210ENST00000494402 ZNF700Q9H0M5 742 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 AVENQ9NQS1 362 aaPredicted RBP8.74□□□□□ -1.01
SNX13-210ENST00000494402 FAM8A1Q9UBU6 413 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 MSRB2Q9Y3D2 182 aa8.74□□□□□ -1.01
SNX13-210ENST00000494402 SOX9P48436 509 aa8.73□□□□□ -1.01
SNX13-210ENST00000494402 DNM1Q05193 864 aaKnown RBP8.73□□□□□ -1.01
SNX13-210ENST00000494402 COL9A2Q14055 689 aaPredicted RBP8.73□□□□□ -1.01
SNX13-210ENST00000494402 JAMLQ86YT9 394 aa8.73□□□□□ -1.01
SNX13-210ENST00000494402 TMX4Q9H1E5 349 aaPredicted RBP8.73□□□□□ -1.01
SNX13-210ENST00000494402 EVA1BQ9NVM1 165 aa8.73□□□□□ -1.01
SNX13-210ENST00000494402 KBTBD4Q9NVX7 518 aa8.73□□□□□ -1.01
SNX13-210ENST00000494402 GOLGA8CPA6NN73 597 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 CCER2I3L3R5 266 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 ZBTB39O15060 712 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 RNF40O75150 1001 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 FGAP02671 866 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 PMLP29590 882 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 SQSTM1Q13501 440 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 TTF1Q15361 905 aaPredicted RBP8.72□□□□□ -1.01
SNX13-210ENST00000494402 TCEA2Q15560 299 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 TKFCQ3LXA3 575 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 PUS10Q3MIT2 529 aaKnown RBP8.72□□□□□ -1.01
SNX13-210ENST00000494402 TNS4Q8IZW8 715 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 SYNPOQ8N3V7 929 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 ARPC5LQ9BPX5 153 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 GINM1Q9NU53 330 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 PLAAQ9Y263 795 aa8.72□□□□□ -1.01
SNX13-210ENST00000494402 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
SNX13-210ENST00000494402 NRDCO43847 1150 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
SNX13-210ENST00000494402 PDGFAP04085 211 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 PCSK2P16519 638 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 TNNI3KQ59H18 835 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 BLOC1S3Q6QNY0 202 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 SH3BP5LQ7L8J4 393 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 EDEM1Q92611 657 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 ANAPC16Q96DE5 110 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 LRCH3Q96II8 777 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 TSPAN10Q9H1Z9 355 aaPredicted RBP8.71□□□□□ -1.02
SNX13-210ENST00000494402 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.71□□□□□ -1.02
SNX13-210ENST00000494402 ANAPC4Q9UJX5 808 aa8.71□□□□□ -1.02
SNX13-210ENST00000494402 TMEM229AB2RXF0 380 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 KCNQ2O43526 872 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 CPNE3O75131 537 aaKnown RBP8.7□□□□□ -1.02
SNX13-210ENST00000494402 BPNT1O95861 308 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 ATF3P18847 181 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 MCCP23508 829 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 MAN1A1P33908 653 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 ZEB1P37275 1124 aaPredicted RBP8.7□□□□□ -1.02
SNX13-210ENST00000494402 PWP1Q13610 501 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 RASGRF1Q13972 1273 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 C2orf27AQ580R0 203 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 OSBPL7Q9BZF2 842 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 CASS4Q9NQ75 786 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 LEMD3Q9Y2U8 911 aa8.7□□□□□ -1.02
SNX13-210ENST00000494402 A0A1W2PRU2 124 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 PDPK1O15530 556 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 USP17L7P0C7H9 530 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 TTC39BQ5VTQ0 682 aaPredicted RBP8.69□□□□□ -1.02
SNX13-210ENST00000494402 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 STAG2Q8N3U4 1231 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 PAF1Q8N7H5 531 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 ANKK1Q8NFD2 765 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 CHAC2Q8WUX2 184 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 EMID1Q96A84 441 aaPredicted RBP8.69□□□□□ -1.02
SNX13-210ENST00000494402 MYO19Q96H55 970 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 RSRP1Q9BUV0 290 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 CARD14Q9BXL6 1004 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 SRCIN1Q9C0H9 1055 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 ADAMTS1Q9UHI8 967 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 MCM8Q9UJA3 840 aa8.69□□□□□ -1.02
SNX13-210ENST00000494402 ACTN4O43707 911 aaKnown RBP8.68□□□□□ -1.02
SNX13-210ENST00000494402 RAPGEF1Q13905 1077 aa8.68□□□□□ -1.02
SNX13-210ENST00000494402 DALRD3Q5D0E6 543 aaKnown RBP8.68□□□□□ -1.02
SNX13-210ENST00000494402 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.68□□□□□ -1.02
SNX13-210ENST00000494402 SEPT12Q8IYM1 358 aa8.68□□□□□ -1.02
SNX13-210ENST00000494402 THAP3Q8WTV1 239 aaPredicted RBP8.68□□□□□ -1.02
SNX13-210ENST00000494402 NOC4LQ9BVI4 516 aaKnown RBP8.68□□□□□ -1.02
SNX13-210ENST00000494402 MAP3K20Q9NYL2 800 aaKnown RBP8.68□□□□□ -1.02
SNX13-210ENST00000494402 SCINQ9Y6U3 715 aa8.68□□□□□ -1.02
SNX13-210ENST00000494402 MAGEB6P1A0A0J9YX57 407 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 NPHP1O15259 732 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 CDC27P30260 824 aa8.67□□□□□ -1.02
SNX13-210ENST00000494402 EPHA4P54764 986 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms