RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 EAPPQ56P03 285 aaPredicted RBP14.04□□□□□ -0.16
UBP1-211ENST00000490112 GIGYF2Q6Y7W6 1299 aaKnown RBP14.04□□□□□ -0.16
UBP1-211ENST00000490112 TTLL7Q6ZT98 887 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 NUTM1Q86Y26 1132 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 ZNF34Q8IZ26 560 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 ZBTB3Q9H5J0 574 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 TSPYL4Q9UJ04 414 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 ZNF541Q9H0D2 1346 aa14.04□□□□□ -0.16
UBP1-211ENST00000490112 GPTP24298 496 aa14.03□□□□□ -0.16
UBP1-211ENST00000490112 RALBP1Q15311 655 aa14.03□□□□□ -0.16
UBP1-211ENST00000490112 OLFM4Q6UX06 510 aa14.03□□□□□ -0.16
UBP1-211ENST00000490112 NLRP3Q96P20 1036 aa14.03□□□□□ -0.16
UBP1-211ENST00000490112 VPS33BQ9H267 617 aa14.03□□□□□ -0.16
UBP1-211ENST00000490112 MKRN1Q9UHC7 482 aaKnown RBP14.03□□□□□ -0.16
UBP1-211ENST00000490112 CNTNAP1P78357 1384 aa14.03□□□□□ -0.16
UBP1-211ENST00000490112 ABCC12Q96J65 1359 aa14.03□□□□□ -0.16
UBP1-211ENST00000490112 RNF123Q5XPI4 1314 aa14.02□□□□□ -0.17
UBP1-211ENST00000490112 UBN2Q6ZU65 1347 aa14.02□□□□□ -0.17
UBP1-211ENST00000490112 ITGBL1O95965 494 aaPredicted RBP14.02□□□□□ -0.17
UBP1-211ENST00000490112 LMOD1P29536 600 aaPredicted RBP14.02□□□□□ -0.17
UBP1-211ENST00000490112 RIPK4P57078 832 aa14.02□□□□□ -0.17
UBP1-211ENST00000490112 SUSD4Q5VX71 490 aa14.02□□□□□ -0.17
UBP1-211ENST00000490112 THUMPD2Q9BTF0 503 aaKnown RBP14.02□□□□□ -0.17
UBP1-211ENST00000490112 SNED1Q8TER0 1413 aa14.01□□□□□ -0.17
UBP1-211ENST00000490112 PPEF1O14829 653 aaPredicted RBP14.01□□□□□ -0.17
UBP1-211ENST00000490112 NTSR2O95665 410 aa14.01□□□□□ -0.17
UBP1-211ENST00000490112 HSP90AB3PQ58FF7 597 aa14.01□□□□□ -0.17
UBP1-211ENST00000490112 LARGE2Q8N3Y3 721 aa14.01□□□□□ -0.17
UBP1-211ENST00000490112 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
UBP1-211ENST00000490112 SLC10A5Q5PT55 438 aa14□□□□□ -0.17
UBP1-211ENST00000490112 CNTROBQ8N137 903 aa14□□□□□ -0.17
UBP1-211ENST00000490112 SUPT20HQ8NEM7 779 aa14□□□□□ -0.17
UBP1-211ENST00000490112 EIF2S2P20042 333 aaKnown RBP13.99□□□□□ -0.17
UBP1-211ENST00000490112 NIM1KQ8IY84 436 aa13.99□□□□□ -0.17
UBP1-211ENST00000490112 AIDAQ96BJ3 306 aa13.99□□□□□ -0.17
UBP1-211ENST00000490112 GJA3Q9Y6H8 435 aa13.99□□□□□ -0.17
UBP1-211ENST00000490112 ADAMTSL1Q8N6G6 1762 aa13.99□□□□□ -0.17
UBP1-211ENST00000490112 BBOX1O75936 387 aa13.98□□□□□ -0.17
UBP1-211ENST00000490112 TMPOP42166 694 aaKnown RBP13.98□□□□□ -0.17
UBP1-211ENST00000490112 VEGFBP49765 207 aa13.98□□□□□ -0.17
UBP1-211ENST00000490112 PDIA6Q15084 440 aa13.98□□□□□ -0.17
UBP1-211ENST00000490112 USP50Q70EL3 339 aaPredicted RBP13.98□□□□□ -0.17
UBP1-211ENST00000490112 ATP6V0A2Q9Y487 856 aa13.98□□□□□ -0.17
UBP1-211ENST00000490112 RASSF10A6NK89 507 aa13.97□□□□□ -0.17
UBP1-211ENST00000490112 CTCFP49711 727 aaPredicted RBP13.97□□□□□ -0.17
UBP1-211ENST00000490112 DEFB115Q30KQ5 88 aa13.97□□□□□ -0.17
UBP1-211ENST00000490112 MAP1SQ66K74 1059 aaPredicted RBP13.97□□□□□ -0.17
UBP1-211ENST00000490112 LRP10Q7Z4F1 713 aa13.97□□□□□ -0.17
UBP1-211ENST00000490112 OCEL1Q9H607 264 aa13.97□□□□□ -0.17
UBP1-211ENST00000490112 PRDM10Q9NQV6 1147 aa13.97□□□□□ -0.17
UBP1-211ENST00000490112 PPIP5K2O43314 1243 aa13.96□□□□□ -0.17
UBP1-211ENST00000490112 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
UBP1-211ENST00000490112 SCNN1DP51172 638 aa13.95□□□□□ -0.18
UBP1-211ENST00000490112 TCIRG1Q13488 830 aa13.95□□□□□ -0.18
UBP1-211ENST00000490112 DDX46Q7L014 1031 aaKnown RBP13.95□□□□□ -0.18
UBP1-211ENST00000490112 COPS6Q7L5N1 327 aa13.95□□□□□ -0.18
UBP1-211ENST00000490112 TMC4Q7Z404 712 aa13.95□□□□□ -0.18
UBP1-211ENST00000490112 SP8Q8IXZ3 490 aa13.95□□□□□ -0.18
UBP1-211ENST00000490112 RTFDC1Q9BY42 306 aaPredicted RBP13.95□□□□□ -0.18
UBP1-211ENST00000490112 DDX21Q9NR30 783 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBP1-211ENST00000490112 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
UBP1-211ENST00000490112 ZNRF3Q9ULT6 936 aa13.95□□□□□ -0.18
UBP1-211ENST00000490112 ABCC4O15439 1325 aa13.94□□□□□ -0.18
UBP1-211ENST00000490112 MYBBP1AQ9BQG0 1328 aaKnown RBP13.94□□□□□ -0.18
UBP1-211ENST00000490112 FOXN1O15353 648 aa13.94□□□□□ -0.18
UBP1-211ENST00000490112 HOXB7P09629 217 aa13.94□□□□□ -0.18
UBP1-211ENST00000490112 MAP2K1Q02750 393 aaPredicted RBP13.94□□□□□ -0.18
UBP1-211ENST00000490112 DPP8Q6V1X1 898 aaPredicted RBP13.94□□□□□ -0.18
UBP1-211ENST00000490112 C3orf67Q6ZVT6 689 aa13.94□□□□□ -0.18
UBP1-211ENST00000490112 NLRP10Q86W26 655 aa13.94□□□□□ -0.18
UBP1-211ENST00000490112 XAGE3Q8WTP9 111 aa13.94□□□□□ -0.18
UBP1-211ENST00000490112 ADARB2Q9NS39 739 aaKnown RBP13.94□□□□□ -0.18
UBP1-211ENST00000490112 WBP1LQ9NX94 342 aa13.94□□□□□ -0.18
UBP1-211ENST00000490112 ABT1Q9ULW3 272 aaKnown RBP13.94□□□□□ -0.18
UBP1-211ENST00000490112 ANKRD36CQ5JPF3 1778 aa13.94□□□□□ -0.18
UBP1-211ENST00000490112 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 CDHR2Q9BYE9 1310 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 CHL1O00533 1208 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 EPS15P42566 896 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 ECE1P42892 770 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 AIMP1Q12904 312 aaKnown RBP13.93□□□□□ -0.18
UBP1-211ENST00000490112 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBP1-211ENST00000490112 AOC3Q16853 763 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 PROSER3Q2NL68 480 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 MPNDQ8N594 471 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 RUNDC1Q96C34 613 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
UBP1-211ENST00000490112 COL4A5P29400 1685 aa13.93□□□□□ -0.18
UBP1-211ENST00000490112 WDR33Q9C0J8 1336 aaKnown RBP13.92□□□□□ -0.18
UBP1-211ENST00000490112 ANXA1P04083 346 aa13.92□□□□□ -0.18
UBP1-211ENST00000490112 GRAPQ13588 217 aa13.92□□□□□ -0.18
UBP1-211ENST00000490112 TNIP1Q15025 636 aa13.92□□□□□ -0.18
UBP1-211ENST00000490112 GRAPLQ8TC17 118 aaPredicted RBP13.92□□□□□ -0.18
UBP1-211ENST00000490112 GPRC5DQ9NZD1 345 aa13.92□□□□□ -0.18
UBP1-211ENST00000490112 HCLS1P14317 486 aaPredicted RBP13.91□□□□□ -0.18
UBP1-211ENST00000490112 CXCL9Q07325 125 aa13.91□□□□□ -0.18
UBP1-211ENST00000490112 KIAA2012Q0VF49 1180 aa13.91□□□□□ -0.18
UBP1-211ENST00000490112 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
UBP1-211ENST00000490112 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms