RNA–Protein interactions for RNA: ENST00000489805.5

TFAP2A-216, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 2,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-216ENST00000489805 BRF1Q92994 677 aa23.6■■□□□ 1.37
TFAP2A-216ENST00000489805 KCNB2Q92953 911 aa23.59■■□□□ 1.37
TFAP2A-216ENST00000489805 PHF8Q9UPP1 1060 aa23.59■■□□□ 1.37
TFAP2A-216ENST00000489805 MTX1Q13505 466 aa23.59■■□□□ 1.37
TFAP2A-216ENST00000489805 NAP1L2Q9ULW6 460 aaPredicted RBP23.59■■□□□ 1.37
TFAP2A-216ENST00000489805 NPHP4O75161 1426 aaPredicted RBP23.59■■□□□ 1.37
TFAP2A-216ENST00000489805 CHST3Q7LGC8 479 aa23.58■■□□□ 1.37
TFAP2A-216ENST00000489805 RIC3Q7Z5B4 369 aa23.58■■□□□ 1.37
TFAP2A-216ENST00000489805 ZNF592Q92610 1267 aa23.58■■□□□ 1.37
TFAP2A-216ENST00000489805 TBX22Q9Y458 520 aa23.58■■□□□ 1.37
TFAP2A-216ENST00000489805 PSME1Q06323 249 aa23.58■■□□□ 1.36
TFAP2A-216ENST00000489805 DDX46Q7L014 1031 aaKnown RBP23.57■■□□□ 1.36
TFAP2A-216ENST00000489805 BABAM1Q9NWV8 329 aa23.57■■□□□ 1.36
TFAP2A-216ENST00000489805 AXIN2Q9Y2T1 843 aa23.57■■□□□ 1.36
TFAP2A-216ENST00000489805 ZSCAN20P17040 1043 aaPredicted RBP23.57■■□□□ 1.36
TFAP2A-216ENST00000489805 C1orf141Q5JVX7 400 aa23.57■■□□□ 1.36
TFAP2A-216ENST00000489805 Q6ZUG5 572 aa23.57■■□□□ 1.36
TFAP2A-216ENST00000489805 CACNA1FO60840 1977 aa23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 GTF2F1P35269 517 aaKnown RBP eCLIP23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 AKAP4Q5JQC9 854 aa23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 MYD88Q99836 296 aa23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 RGPD2P0DJD1 1756 aa23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 ATP5J2-PTCD1G3V325 749 aa23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 PTCD1O75127 700 aaKnown RBP23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 TAF5LO75529 589 aa23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 ZNF165P49910 485 aa23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 PDCL2Q8N4E4 241 aa23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 CACTINQ8WUQ7 758 aaKnown RBP23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 V9GYY5 206 aaPredicted RBP23.56■■□□□ 1.36
TFAP2A-216ENST00000489805 CCT2P78371 535 aaKnown RBP23.55■■□□□ 1.36
TFAP2A-216ENST00000489805 C11orf57Q6ZUT1 292 aaPredicted RBP23.55■■□□□ 1.36
TFAP2A-216ENST00000489805 USP27XA6NNY8 438 aa23.55■■□□□ 1.36
TFAP2A-216ENST00000489805 TFCP2Q12800 502 aa23.55■■□□□ 1.36
TFAP2A-216ENST00000489805 SYTL4Q96C24 671 aaPredicted RBP23.55■■□□□ 1.36
TFAP2A-216ENST00000489805 DBNLQ9UJU6 430 aaKnown RBP23.55■■□□□ 1.36
TFAP2A-216ENST00000489805 PSMA5P28066 241 aa23.54■■□□□ 1.36
TFAP2A-216ENST00000489805 PDIA6Q15084 440 aa23.54■■□□□ 1.36
TFAP2A-216ENST00000489805 NCOA5Q9HCD5 579 aaKnown RBP23.54■■□□□ 1.36
TFAP2A-216ENST00000489805 MTERF4Q7Z6M4 381 aaKnown RBP23.54■■□□□ 1.36
TFAP2A-216ENST00000489805 ZNF75DP51815 510 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 PLEKHO1Q53GL0 409 aaPredicted RBP23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 ZSCAN25Q6NSZ9 544 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 COPS6Q7L5N1 327 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 ERC1Q8IUD2 1116 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 LINS1Q8NG48 757 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 XAGE3Q8WTP9 111 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 H3BQV1 296 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 ALDH1L1O75891 902 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 IFFO2Q5TF58 517 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 ORAI2Q96SN7 254 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 DBNDD2Q9BQY9 259 aa23.53■■□□□ 1.36
TFAP2A-216ENST00000489805 CYP21A2P08686 494 aa23.52■■□□□ 1.36
TFAP2A-216ENST00000489805 STOX1Q6ZVD7 989 aa23.52■■□□□ 1.36
TFAP2A-216ENST00000489805 SMAP1Q8IYB5 467 aaPredicted RBP23.52■■□□□ 1.36
TFAP2A-216ENST00000489805 CLSTN2Q9H4D0 955 aa23.52■■□□□ 1.36
TFAP2A-216ENST00000489805 CLIP2Q9UDT6 1046 aa23.52■■□□□ 1.36
TFAP2A-216ENST00000489805 MARF1Q9Y4F3 1742 aaKnown RBP23.52■■□□□ 1.36
TFAP2A-216ENST00000489805 FGD1P98174 961 aa23.52■■□□□ 1.36
TFAP2A-216ENST00000489805 SCRN1Q12765 414 aa23.52■■□□□ 1.36
TFAP2A-216ENST00000489805 CHAF1AQ13111 956 aaPredicted RBP23.51■■□□□ 1.35
TFAP2A-216ENST00000489805 RAB11FIP4Q86YS3 637 aa23.51■■□□□ 1.35
TFAP2A-216ENST00000489805 GOLPH3LQ9H4A5 285 aa23.51■■□□□ 1.35
TFAP2A-216ENST00000489805 GOLGA6L6A8MZA4 724 aa23.51■■□□□ 1.35
TFAP2A-216ENST00000489805 TNNT1P13805 278 aa23.51■■□□□ 1.35
TFAP2A-216ENST00000489805 TRMT1Q9NXH9 659 aaKnown RBP23.51■■□□□ 1.35
TFAP2A-216ENST00000489805 APOBRQ0VD83 1088 aa23.5■■□□□ 1.35
TFAP2A-216ENST00000489805 NEK1Q96PY6 1258 aa23.5■■□□□ 1.35
TFAP2A-216ENST00000489805 RESTQ13127 1097 aa23.5■■□□□ 1.35
TFAP2A-216ENST00000489805 RNF20Q5VTR2 975 aa23.5■■□□□ 1.35
TFAP2A-216ENST00000489805 FILIP1Q7Z7B0 1213 aa23.5■■□□□ 1.35
TFAP2A-216ENST00000489805 ANKRD24Q8TF21 1146 aa23.5■■□□□ 1.35
TFAP2A-216ENST00000489805 HOXB7P09629 217 aa23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 ZC3H6P61129 1189 aaKnown RBP23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 OTUD7BQ6GQQ9 843 aa23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 UBE3BQ7Z3V4 1068 aa23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 SCAND2PQ9GZW5 306 aaPredicted RBP23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 MED23Q9ULK4 1368 aa23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 NCBP1Q09161 790 aaKnown RBP23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 PLA2G4DQ86XP0 818 aa23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 NFATC2IPQ8NCF5 419 aa23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 GTF3C6Q969F1 213 aa23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 GPHNQ9NQX3 736 aaPredicted RBP23.49■■□□□ 1.35
TFAP2A-216ENST00000489805 PDCP20941 246 aa23.48■■□□□ 1.35
TFAP2A-216ENST00000489805 CRYBG1Q9Y4K1 1723 aa23.48■■□□□ 1.35
TFAP2A-216ENST00000489805 NPHP3Q7Z494 1330 aa23.48■■□□□ 1.35
TFAP2A-216ENST00000489805 NEURL1BA8MQ27 555 aa23.48■■□□□ 1.35
TFAP2A-216ENST00000489805 NPHP1O15259 732 aa23.48■■□□□ 1.35
TFAP2A-216ENST00000489805 TPD52L1Q16890 204 aaPredicted RBP23.48■■□□□ 1.35
TFAP2A-216ENST00000489805 GCP02774 474 aa23.47■■□□□ 1.35
TFAP2A-216ENST00000489805 ELP1O95163 1332 aa23.47■■□□□ 1.35
TFAP2A-216ENST00000489805 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
TFAP2A-216ENST00000489805 LTN1O94822 1766 aa23.46■■□□□ 1.35
TFAP2A-216ENST00000489805 ZNF609O15014 1411 aa23.46■■□□□ 1.35
TFAP2A-216ENST00000489805 GCKRQ14397 625 aa23.46■■□□□ 1.35
TFAP2A-216ENST00000489805 GJB4Q9NTQ9 266 aa23.46■■□□□ 1.35
TFAP2A-216ENST00000489805 CCAR1Q8IX12 1150 aaKnown RBP23.46■■□□□ 1.35
TFAP2A-216ENST00000489805 NEUROD6Q96NK8 337 aa23.46■■□□□ 1.35
TFAP2A-216ENST00000489805 DDX21Q9NR30 783 aaKnown RBP eCLIP23.46■■□□□ 1.35
TFAP2A-216ENST00000489805 CTDNEP1O95476 244 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms