RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 CFHR5Q9BXR6 569 aa11.38□□□□□ -0.59
APTX-228ENST00000486724 COL25A1Q9BXS0 654 aaPredicted RBP11.38□□□□□ -0.59
APTX-228ENST00000486724 TMX4Q9H1E5 349 aaPredicted RBP11.38□□□□□ -0.59
APTX-228ENST00000486724 RGL2O15211 777 aa11.37□□□□□ -0.59
APTX-228ENST00000486724 TM4SF4P48230 202 aa11.37□□□□□ -0.59
APTX-228ENST00000486724 FKBP1BP68106 108 aa11.37□□□□□ -0.59
APTX-228ENST00000486724 OTOP1Q7RTM1 612 aa11.37□□□□□ -0.59
APTX-228ENST00000486724 SAMD7Q7Z3H4 446 aa11.37□□□□□ -0.59
APTX-228ENST00000486724 SULF1Q8IWU6 871 aa11.37□□□□□ -0.59
APTX-228ENST00000486724 ARMC5Q96C12 935 aa11.37□□□□□ -0.59
APTX-228ENST00000486724 TMEM106CQ9BVX2 250 aa11.37□□□□□ -0.59
APTX-228ENST00000486724 POLR2AP24928 1970 aaKnown RBP11.37□□□□□ -0.59
APTX-228ENST00000486724 ABCC12Q96J65 1359 aa11.37□□□□□ -0.59
APTX-228ENST00000486724 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
APTX-228ENST00000486724 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
APTX-228ENST00000486724 SREBF2Q12772 1141 aa11.36□□□□□ -0.59
APTX-228ENST00000486724 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
APTX-228ENST00000486724 CDCA8Q53HL2 280 aa11.36□□□□□ -0.59
APTX-228ENST00000486724 SLC51AQ86UW1 340 aa11.36□□□□□ -0.59
APTX-228ENST00000486724 CDCA5Q96FF9 252 aa11.36□□□□□ -0.59
APTX-228ENST00000486724 SPTBN5Q9NRC6 3674 aaKnown RBP11.35□□□□□ -0.59
APTX-228ENST00000486724 ZNF790Q6PG37 636 aa11.35□□□□□ -0.59
APTX-228ENST00000486724 DPF2Q92785 391 aa11.35□□□□□ -0.59
APTX-228ENST00000486724 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
APTX-228ENST00000486724 RTFDC1Q9BY42 306 aaPredicted RBP11.35□□□□□ -0.59
APTX-228ENST00000486724 NYXQ9GZU5 481 aa11.35□□□□□ -0.59
APTX-228ENST00000486724 EGFRP00533 1210 aa11.34□□□□□ -0.59
APTX-228ENST00000486724 KIAA2012Q0VF49 1180 aa11.34□□□□□ -0.59
APTX-228ENST00000486724 NCBP3Q53F19 620 aaKnown RBP11.34□□□□□ -0.59
APTX-228ENST00000486724 RBM17Q96I25 401 aaKnown RBP11.34□□□□□ -0.59
APTX-228ENST00000486724 GGA3Q9NZ52 723 aa11.34□□□□□ -0.59
APTX-228ENST00000486724 PTPN22Q9Y2R2 807 aa11.34□□□□□ -0.59
APTX-228ENST00000486724 PRAMEF22A3QJZ6 481 aa11.33□□□□□ -0.6
APTX-228ENST00000486724 EIF4G2P78344 907 aaKnown RBP eCLIP11.33□□□□□ -0.6
APTX-228ENST00000486724 FMNL2Q96PY5 1086 aa11.33□□□□□ -0.6
APTX-228ENST00000486724 PRO3102Q9H379 93 aa11.33□□□□□ -0.6
APTX-228ENST00000486724 R3HDMLQ9H3Y0 253 aa11.33□□□□□ -0.6
APTX-228ENST00000486724 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
APTX-228ENST00000486724 ATP6V0A2Q9Y487 856 aa11.33□□□□□ -0.6
APTX-228ENST00000486724 ZNF609O15014 1411 aa11.33□□□□□ -0.6
APTX-228ENST00000486724 A0A1W2PPC1 479 aa11.32□□□□□ -0.6
APTX-228ENST00000486724 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
APTX-228ENST00000486724 PIP4K2AP48426 406 aaPredicted RBP11.32□□□□□ -0.6
APTX-228ENST00000486724 DPP8Q6V1X1 898 aaPredicted RBP11.32□□□□□ -0.6
APTX-228ENST00000486724 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
APTX-228ENST00000486724 SIPA1L3O60292 1781 aaPredicted RBP11.31□□□□□ -0.6
APTX-228ENST00000486724 YDJCA8MPS7 323 aa11.31□□□□□ -0.6
APTX-228ENST00000486724 HSPA5P11021 654 aaKnown RBP11.31□□□□□ -0.6
APTX-228ENST00000486724 RPS12P25398 132 aaKnown RBP11.31□□□□□ -0.6
APTX-228ENST00000486724 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
APTX-228ENST00000486724 RBM26Q5T8P6 1007 aaKnown RBP11.31□□□□□ -0.6
APTX-228ENST00000486724 ERO1AQ96HE7 468 aa11.31□□□□□ -0.6
APTX-228ENST00000486724 ZNF333Q96JL9 665 aa11.31□□□□□ -0.6
APTX-228ENST00000486724 PRDM6Q9NQX0 595 aa11.31□□□□□ -0.6
APTX-228ENST00000486724 SOX1O00570 391 aaPredicted RBP11.3□□□□□ -0.6
APTX-228ENST00000486724 TEFQ10587 303 aa11.3□□□□□ -0.6
APTX-228ENST00000486724 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
APTX-228ENST00000486724 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
APTX-228ENST00000486724 STXBP5LQ9Y2K9 1186 aa11.3□□□□□ -0.6
APTX-228ENST00000486724 IBTKQ9P2D0 1353 aaPredicted RBP11.29□□□□□ -0.6
APTX-228ENST00000486724 PSMD14O00487 310 aa11.29□□□□□ -0.6
APTX-228ENST00000486724 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
APTX-228ENST00000486724 SLC4A8Q2Y0W8 1093 aa11.29□□□□□ -0.6
APTX-228ENST00000486724 DPF3Q92784 378 aa11.29□□□□□ -0.6
APTX-228ENST00000486724 KDM3BQ7LBC6 1761 aa11.28□□□□□ -0.6
APTX-228ENST00000486724 UBE2Q2LH0YL09 131 aa11.28□□□□□ -0.6
APTX-228ENST00000486724 MTHFSDQ2M296 383 aaKnown RBP11.28□□□□□ -0.6
APTX-228ENST00000486724 MOB2Q70IA6 237 aa11.28□□□□□ -0.6
APTX-228ENST00000486724 NBPF11Q86T75 865 aa11.28□□□□□ -0.6
APTX-228ENST00000486724 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.28□□□□□ -0.6
APTX-228ENST00000486724 MPNDQ8N594 471 aa11.28□□□□□ -0.6
APTX-228ENST00000486724 EFCC1Q9HA90 598 aa11.28□□□□□ -0.6
APTX-228ENST00000486724 DDX60Q8IY21 1712 aaKnown RBP11.27□□□□□ -0.61
APTX-228ENST00000486724 IL13P35225 146 aa11.27□□□□□ -0.61
APTX-228ENST00000486724 HLFQ16534 295 aa11.27□□□□□ -0.61
APTX-228ENST00000486724 SLC9C1Q4G0N8 1177 aa11.27□□□□□ -0.61
APTX-228ENST00000486724 ANGEL2Q5VTE6 544 aaKnown RBP11.27□□□□□ -0.61
APTX-228ENST00000486724 GPR153Q6NV75 609 aa11.27□□□□□ -0.61
APTX-228ENST00000486724 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
APTX-228ENST00000486724 DUOX1Q9NRD9 1551 aa11.27□□□□□ -0.61
APTX-228ENST00000486724 ASTN2O75129 1339 aaPredicted RBP11.27□□□□□ -0.61
APTX-228ENST00000486724 TCIRG1Q13488 830 aa11.26□□□□□ -0.61
APTX-228ENST00000486724 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
APTX-228ENST00000486724 SP8Q8IXZ3 490 aa11.26□□□□□ -0.61
APTX-228ENST00000486724 DEFB123Q8N688 67 aa11.26□□□□□ -0.61
APTX-228ENST00000486724 USP16Q9Y5T5 823 aa11.26□□□□□ -0.61
APTX-228ENST00000486724 ABCC4O15439 1325 aa11.26□□□□□ -0.61
APTX-228ENST00000486724 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
APTX-228ENST00000486724 NR2E3Q9Y5X4 410 aa11.25□□□□□ -0.61
APTX-228ENST00000486724 EYSQ5T1H1 3165 aa11.24□□□□□ -0.61
APTX-228ENST00000486724 NUP98P52948 1817 aa11.24□□□□□ -0.61
APTX-228ENST00000486724 BBOX1O75936 387 aa11.24□□□□□ -0.61
APTX-228ENST00000486724 HMOX1P09601 288 aa11.24□□□□□ -0.61
APTX-228ENST00000486724 INHBEP58166 350 aa11.24□□□□□ -0.61
APTX-228ENST00000486724 IFNL1Q8IU54 200 aa11.24□□□□□ -0.61
APTX-228ENST00000486724 NLRP3Q96P20 1036 aa11.24□□□□□ -0.61
APTX-228ENST00000486724 HTATIP2Q9BUP3 242 aa11.24□□□□□ -0.61
APTX-228ENST00000486724 ERBB4Q15303 1308 aa11.24□□□□□ -0.61
APTX-228ENST00000486724 MANSC4A6NHS7 340 aaPredicted RBP11.23□□□□□ -0.61
APTX-228ENST00000486724 NBPF26B4DH59 902 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms