RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 TM4SF4P48230 202 aa14.02□□□□□ -0.17
TRAIP-206ENST00000477546 FKBP1BP68106 108 aa14.02□□□□□ -0.17
TRAIP-206ENST00000477546 TEFQ10587 303 aa14.02□□□□□ -0.17
TRAIP-206ENST00000477546 NUTM1Q86Y26 1132 aa14.02□□□□□ -0.17
TRAIP-206ENST00000477546 SULF1Q8IWU6 871 aa14.02□□□□□ -0.17
TRAIP-206ENST00000477546 ATP6V0A2Q9Y487 856 aa14.02□□□□□ -0.17
TRAIP-206ENST00000477546 EGFRP00533 1210 aa14.01□□□□□ -0.17
TRAIP-206ENST00000477546 TBC1D10BQ4KMP7 808 aaPredicted RBP14.01□□□□□ -0.17
TRAIP-206ENST00000477546 PAPPA2Q9BXP8 1791 aa14.01□□□□□ -0.17
TRAIP-206ENST00000477546 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
TRAIP-206ENST00000477546 YDJCA8MPS7 323 aa14□□□□□ -0.17
TRAIP-206ENST00000477546 CHRDL2Q6WN34 429 aa14□□□□□ -0.17
TRAIP-206ENST00000477546 ARMC5Q96C12 935 aa14□□□□□ -0.17
TRAIP-206ENST00000477546 CDCA5Q96FF9 252 aa14□□□□□ -0.17
TRAIP-206ENST00000477546 ZBTB12Q9Y330 459 aaPredicted RBP14□□□□□ -0.17
TRAIP-206ENST00000477546 TRIM17Q9Y577 477 aa14□□□□□ -0.17
TRAIP-206ENST00000477546 USP16Q9Y5T5 823 aa14□□□□□ -0.17
TRAIP-206ENST00000477546 COL6A3P12111 3177 aa13.99□□□□□ -0.17
TRAIP-206ENST00000477546 IBTKQ9P2D0 1353 aaPredicted RBP13.99□□□□□ -0.17
TRAIP-206ENST00000477546 HLFQ16534 295 aa13.99□□□□□ -0.17
TRAIP-206ENST00000477546 OTOP1Q7RTM1 612 aa13.99□□□□□ -0.17
TRAIP-206ENST00000477546 GGA3Q9NZ52 723 aa13.99□□□□□ -0.17
TRAIP-206ENST00000477546 RBM27Q9P2N5 1060 aaKnown RBP13.99□□□□□ -0.17
TRAIP-206ENST00000477546 CEP290O15078 2479 aa13.98□□□□□ -0.17
TRAIP-206ENST00000477546 HMOX1P09601 288 aa13.98□□□□□ -0.17
TRAIP-206ENST00000477546 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
TRAIP-206ENST00000477546 PANK3Q9H999 370 aa13.98□□□□□ -0.17
TRAIP-206ENST00000477546 RPS12P25398 132 aaKnown RBP13.97□□□□□ -0.17
TRAIP-206ENST00000477546 SREBF2Q12772 1141 aa13.97□□□□□ -0.17
TRAIP-206ENST00000477546 IL17REQ8NFR9 667 aa13.97□□□□□ -0.17
TRAIP-206ENST00000477546 R3HDMLQ9H3Y0 253 aa13.97□□□□□ -0.17
TRAIP-206ENST00000477546 BRCA2P51587 3418 aa13.97□□□□□ -0.17
TRAIP-206ENST00000477546 NBPF26B4DH59 902 aa13.96□□□□□ -0.17
TRAIP-206ENST00000477546 PSMD14O00487 310 aa13.96□□□□□ -0.17
TRAIP-206ENST00000477546 KIF4BQ2VIQ3 1234 aa13.96□□□□□ -0.17
TRAIP-206ENST00000477546 RBM26Q5T8P6 1007 aaKnown RBP13.96□□□□□ -0.17
TRAIP-206ENST00000477546 NBPF10Q6P3W6 841 aaKnown RBP13.96□□□□□ -0.17
TRAIP-206ENST00000477546 MPNDQ8N594 471 aa13.96□□□□□ -0.17
TRAIP-206ENST00000477546 TMEM106CQ9BVX2 250 aa13.96□□□□□ -0.17
TRAIP-206ENST00000477546 KCNQ3O43525 872 aa13.95□□□□□ -0.18
TRAIP-206ENST00000477546 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
TRAIP-206ENST00000477546 CENPFP49454 3210 aa13.94□□□□□ -0.18
TRAIP-206ENST00000477546 RANBP2P49792 3224 aaKnown RBP13.94□□□□□ -0.18
TRAIP-206ENST00000477546 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
TRAIP-206ENST00000477546 ALDH1A1P00352 501 aa13.94□□□□□ -0.18
TRAIP-206ENST00000477546 SNRPA1P09661 255 aaKnown RBP13.94□□□□□ -0.18
TRAIP-206ENST00000477546 C3orf67Q6ZVT6 689 aa13.94□□□□□ -0.18
TRAIP-206ENST00000477546 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
TRAIP-206ENST00000477546 SP8Q8IXZ3 490 aa13.94□□□□□ -0.18
TRAIP-206ENST00000477546 POLR2AP24928 1970 aaKnown RBP13.94□□□□□ -0.18
TRAIP-206ENST00000477546 ABCC4O15439 1325 aa13.93□□□□□ -0.18
TRAIP-206ENST00000477546 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
TRAIP-206ENST00000477546 GNAT3A8MTJ3 354 aa13.93□□□□□ -0.18
TRAIP-206ENST00000477546 ERVV-1B6SEH8 477 aa13.93□□□□□ -0.18
TRAIP-206ENST00000477546 CEMIPQ8WUJ3 1361 aa13.93□□□□□ -0.18
TRAIP-206ENST00000477546 ASTN2O75129 1339 aaPredicted RBP13.92□□□□□ -0.18
TRAIP-206ENST00000477546 UBN2Q6ZU65 1347 aa13.92□□□□□ -0.18
TRAIP-206ENST00000477546 UBE2Q2LH0YL09 131 aa13.92□□□□□ -0.18
TRAIP-206ENST00000477546 BBOX1O75936 387 aa13.92□□□□□ -0.18
TRAIP-206ENST00000477546 MOB2Q70IA6 237 aa13.92□□□□□ -0.18
TRAIP-206ENST00000477546 ZNF333Q96JL9 665 aa13.92□□□□□ -0.18
TRAIP-206ENST00000477546 NLRP3Q96P20 1036 aa13.92□□□□□ -0.18
TRAIP-206ENST00000477546 PRO3102Q9H379 93 aa13.92□□□□□ -0.18
TRAIP-206ENST00000477546 KNSTRNQ9Y448 316 aa13.92□□□□□ -0.18
TRAIP-206ENST00000477546 ZNF609O15014 1411 aa13.91□□□□□ -0.18
TRAIP-206ENST00000477546 NTSR2O95665 410 aa13.91□□□□□ -0.18
TRAIP-206ENST00000477546 MKRN3Q13064 507 aaKnown RBP13.91□□□□□ -0.18
TRAIP-206ENST00000477546 ANGEL2Q5VTE6 544 aaKnown RBP13.91□□□□□ -0.18
TRAIP-206ENST00000477546 SUSD4Q5VX71 490 aa13.91□□□□□ -0.18
TRAIP-206ENST00000477546 GAS2L2Q8NHY3 880 aa13.91□□□□□ -0.18
TRAIP-206ENST00000477546 ERO1AQ96HE7 468 aa13.91□□□□□ -0.18
TRAIP-206ENST00000477546 COL25A1Q9BXS0 654 aaPredicted RBP13.91□□□□□ -0.18
TRAIP-206ENST00000477546 MAP3K15Q6ZN16 1313 aa13.9□□□□□ -0.19
TRAIP-206ENST00000477546 DUOX1Q9NRD9 1551 aa13.89□□□□□ -0.19
TRAIP-206ENST00000477546 RTL9Q8NET4 1388 aa13.89□□□□□ -0.19
TRAIP-206ENST00000477546 GPTP24298 496 aa13.89□□□□□ -0.19
TRAIP-206ENST00000477546 DBNDD1Q9H9R9 158 aa13.89□□□□□ -0.19
TRAIP-206ENST00000477546 A0A1W2PPC1 479 aa13.88□□□□□ -0.19
TRAIP-206ENST00000477546 TCIRG1Q13488 830 aa13.88□□□□□ -0.19
TRAIP-206ENST00000477546 SCARF1Q14162 830 aa13.88□□□□□ -0.19
TRAIP-206ENST00000477546 WASHC4Q2M389 1173 aa13.88□□□□□ -0.19
TRAIP-206ENST00000477546 SLC4A8Q2Y0W8 1093 aa13.88□□□□□ -0.19
TRAIP-206ENST00000477546 EFCC1Q9HA90 598 aa13.88□□□□□ -0.19
TRAIP-206ENST00000477546 ZNF280AP59817 542 aaPredicted RBP13.87□□□□□ -0.19
TRAIP-206ENST00000477546 TTLL12Q14166 644 aaPredicted RBP13.87□□□□□ -0.19
TRAIP-206ENST00000477546 PPP1R42Q7Z4L9 355 aa13.87□□□□□ -0.19
TRAIP-206ENST00000477546 NBPF11Q86T75 865 aa13.87□□□□□ -0.19
TRAIP-206ENST00000477546 CD99L2Q8TCZ2 262 aa13.87□□□□□ -0.19
TRAIP-206ENST00000477546 ECE2O60344 883 aa13.86□□□□□ -0.19
TRAIP-206ENST00000477546 INHBEP58166 350 aa13.86□□□□□ -0.19
TRAIP-206ENST00000477546 SLC10A5Q5PT55 438 aa13.86□□□□□ -0.19
TRAIP-206ENST00000477546 KIF6Q6ZMV9 814 aa13.86□□□□□ -0.19
TRAIP-206ENST00000477546 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
TRAIP-206ENST00000477546 IFNL1Q8IU54 200 aa13.86□□□□□ -0.19
TRAIP-206ENST00000477546 ZNF34Q8IZ26 560 aa13.86□□□□□ -0.19
TRAIP-206ENST00000477546 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
TRAIP-206ENST00000477546 MANSC4A6NHS7 340 aaPredicted RBP13.85□□□□□ -0.19
TRAIP-206ENST00000477546 SOX1O00570 391 aaPredicted RBP13.85□□□□□ -0.19
TRAIP-206ENST00000477546 VIL1P09327 827 aaKnown RBP13.85□□□□□ -0.19
TRAIP-206ENST00000477546 GRAPQ13588 217 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms