RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 MRPS9P82933 396 aaKnown RBP21.29■■□□□ 1
VARS2-209ENST00000477288 PI4KAP2A4QPH2 592 aa21.29■■□□□ 1
VARS2-209ENST00000477288 ACTN2P35609 894 aa21.29■■□□□ 1
VARS2-209ENST00000477288 PICALMQ13492 652 aa21.29■■□□□ 1
VARS2-209ENST00000477288 PI4KAP1Q8N8J0 262 aa21.29■■□□□ 1
VARS2-209ENST00000477288 ARL1P40616 181 aaPredicted RBP21.29■■□□□ 1
VARS2-209ENST00000477288 GIGYF2Q6Y7W6 1299 aaKnown RBP21.29■■□□□ 1
VARS2-209ENST00000477288 SYNCQ9H7C4 482 aa21.29■■□□□ 1
VARS2-209ENST00000477288 UQCRFS1P1P0C7P4 283 aa21.28■■□□□ 1
VARS2-209ENST00000477288 NEK1Q96PY6 1258 aa21.28■■□□□ 1
VARS2-209ENST00000477288 CGNQ9P2M7 1197 aaKnown RBP21.28■■□□□ 1
VARS2-209ENST00000477288 IKBKGQ9Y6K9 419 aa21.28■■□□□ 1
VARS2-209ENST00000477288 RPRD2Q5VT52 1461 aaKnown RBP21.28■■□□□ 1
VARS2-209ENST00000477288 TTC21BQ7Z4L5 1316 aa21.28■■□□□ 1
VARS2-209ENST00000477288 TSHZ3Q63HK5 1081 aa21.28■■□□□ 1
VARS2-209ENST00000477288 IQSEC3Q9UPP2 1182 aaPredicted RBP21.28■■□□□ 1
VARS2-209ENST00000477288 ATP6V1AP38606 617 aa21.28■■□□□ 1
VARS2-209ENST00000477288 STX1AQ16623 288 aa21.28■■□□□ 1
VARS2-209ENST00000477288 RGS22Q8NE09 1264 aa21.28■■□□□ 1
VARS2-209ENST00000477288 SETDB2Q96T68 719 aa21.28■■□□□ 1
VARS2-209ENST00000477288 DDX23Q9BUQ8 820 aaKnown RBP21.28■■□□□ 1
VARS2-209ENST00000477288 FAM107BQ9H098 131 aa21.28■■□□□ 1
VARS2-209ENST00000477288 EXOC1Q9NV70 894 aa21.28■■□□□ 1
VARS2-209ENST00000477288 FANCAO15360 1455 aa21.27■■□□□ 1
VARS2-209ENST00000477288 ANXA1P04083 346 aa21.27■■□□□ 1
VARS2-209ENST00000477288 ZSWIM4Q9H7M6 989 aa21.27■■□□□ 1
VARS2-209ENST00000477288 NKTRP30414 1462 aaKnown RBP21.27■■□□□ 1
VARS2-209ENST00000477288 ECM2O94769 699 aaPredicted RBP21.27■■□□□ 1
VARS2-209ENST00000477288 C20orf194Q5TEA3 1177 aa21.27■■□□□ 1
VARS2-209ENST00000477288 WWC3Q9ULE0 1092 aa21.27■■□□□ 1
VARS2-209ENST00000477288 CYP7A1P22680 504 aa21.27■■□□□ 1
VARS2-209ENST00000477288 LRRC27Q9C0I9 530 aa21.27■■□□□ 1
VARS2-209ENST00000477288 STX6O43752 255 aa21.26■□□□□ 0.99
VARS2-209ENST00000477288 MAP3K9P80192 1104 aa21.26■□□□□ 0.99
VARS2-209ENST00000477288 PIK3R4Q99570 1358 aa21.26■□□□□ 0.99
VARS2-209ENST00000477288 WTAPQ15007 396 aa21.26■□□□□ 0.99
VARS2-209ENST00000477288 ERMNQ8TAM6 284 aa21.26■□□□□ 0.99
VARS2-209ENST00000477288 DDX19AQ9NUU7 478 aaKnown RBP21.26■□□□□ 0.99
VARS2-209ENST00000477288 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
VARS2-209ENST00000477288 SKAP1Q86WV1 359 aa21.26■□□□□ 0.99
VARS2-209ENST00000477288 PYM1Q9BRP8 204 aaKnown RBP21.26■□□□□ 0.99
VARS2-209ENST00000477288 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
VARS2-209ENST00000477288 UTP14AQ9BVJ6 771 aaKnown RBP21.25■□□□□ 0.99
VARS2-209ENST00000477288 DHX29Q7Z478 1369 aaKnown RBP21.25■□□□□ 0.99
VARS2-209ENST00000477288 GTF2F1P35269 517 aaKnown RBP eCLIP21.25■□□□□ 0.99
VARS2-209ENST00000477288 FAM135AQ9P2D6 1515 aa21.25■□□□□ 0.99
VARS2-209ENST00000477288 ATP2C2O75185 946 aa21.25■□□□□ 0.99
VARS2-209ENST00000477288 TRIM47Q96LD4 638 aa21.25■□□□□ 0.99
VARS2-209ENST00000477288 OGFOD1Q8N543 542 aa21.25■□□□□ 0.99
VARS2-209ENST00000477288 SLC4A4Q9Y6R1 1079 aa21.25■□□□□ 0.99
VARS2-209ENST00000477288 A0A1W2PRG0 241 aa21.24■□□□□ 0.99
VARS2-209ENST00000477288 ANKRD13DQ6ZTN6 518 aa21.24■□□□□ 0.99
VARS2-209ENST00000477288 RRP9O43818 475 aaKnown RBP21.24■□□□□ 0.99
VARS2-209ENST00000477288 PHACTR2O75167 634 aa21.24■□□□□ 0.99
VARS2-209ENST00000477288 SPECC1LQ69YQ0 1117 aa21.24■□□□□ 0.99
VARS2-209ENST00000477288 HEATR3Q7Z4Q2 680 aa21.24■□□□□ 0.99
VARS2-209ENST00000477288 IFIT1BQ5T764 474 aaKnown RBP21.24■□□□□ 0.99
VARS2-209ENST00000477288 POTEB2H3BUK9 544 aa21.24■□□□□ 0.99
VARS2-209ENST00000477288 TRIM27P14373 513 aa21.24■□□□□ 0.99
VARS2-209ENST00000477288 PLS1Q14651 629 aa21.24■□□□□ 0.99
VARS2-209ENST00000477288 GPATCH8Q9UKJ3 1502 aaKnown RBP21.24■□□□□ 0.99
VARS2-209ENST00000477288 GSDMDP57764 484 aa21.24■□□□□ 0.99
VARS2-209ENST00000477288 KIAA0753Q2KHM9 967 aa21.23■□□□□ 0.99
VARS2-209ENST00000477288 SNW1Q13573 536 aaKnown RBP21.23■□□□□ 0.99
VARS2-209ENST00000477288 C6orf163Q5TEZ5 329 aa21.23■□□□□ 0.99
VARS2-209ENST00000477288 KANK3Q6NY19 840 aa21.23■□□□□ 0.99
VARS2-209ENST00000477288 OTUD6BQ8N6M0 293 aa21.23■□□□□ 0.99
VARS2-209ENST00000477288 CEP112Q8N8E3 955 aa21.23■□□□□ 0.99
VARS2-209ENST00000477288 ZFP91Q96JP5 570 aaPredicted RBP21.23■□□□□ 0.99
VARS2-209ENST00000477288 PAIP2Q9BPZ3 127 aaKnown RBP21.23■□□□□ 0.99
VARS2-209ENST00000477288 MCM5P33992 734 aa21.23■□□□□ 0.99
VARS2-209ENST00000477288 TBC1D5Q92609 795 aa21.23■□□□□ 0.99
VARS2-209ENST00000477288 CADPS2Q86UW7 1296 aa21.22■□□□□ 0.99
VARS2-209ENST00000477288 CCDC102BQ68D86 513 aa21.22■□□□□ 0.99
VARS2-209ENST00000477288 MBIPQ9NS73 344 aa21.22■□□□□ 0.99
VARS2-209ENST00000477288 VEZTQ9HBM0 779 aa21.22■□□□□ 0.99
VARS2-209ENST00000477288 KLF18A0A0U1RQI7 1052 aa21.22■□□□□ 0.99
VARS2-209ENST00000477288 ZCRB1Q8TBF4 217 aaKnown RBP21.22■□□□□ 0.99
VARS2-209ENST00000477288 C14orf93Q9H972 538 aaKnown RBP21.22■□□□□ 0.99
VARS2-209ENST00000477288 ACEP12821 1306 aa21.22■□□□□ 0.99
VARS2-209ENST00000477288 NBPF7P0C2Y1 421 aaPredicted RBP21.22■□□□□ 0.99
VARS2-209ENST00000477288 RBM26Q5T8P6 1007 aaKnown RBP21.22■□□□□ 0.99
VARS2-209ENST00000477288 ZGPATQ8N5A5 531 aaKnown RBP21.22■□□□□ 0.99
VARS2-209ENST00000477288 C8orf37Q96NL8 207 aa21.22■□□□□ 0.99
VARS2-209ENST00000477288 KRT23Q9C075 422 aa21.22■□□□□ 0.99
VARS2-209ENST00000477288 ADCY5O95622 1261 aa21.21■□□□□ 0.99
VARS2-209ENST00000477288 UBAP1LF5GYI3 381 aa21.21■□□□□ 0.99
VARS2-209ENST00000477288 TNPO1Q92973 898 aaKnown RBP21.21■□□□□ 0.99
VARS2-209ENST00000477288 RNF216Q9NWF9 866 aaPredicted RBP21.21■□□□□ 0.99
VARS2-209ENST00000477288 SCAF11Q99590 1463 aaKnown RBP21.21■□□□□ 0.99
VARS2-209ENST00000477288 TERF1P54274 439 aa21.21■□□□□ 0.99
VARS2-209ENST00000477288 N4BP3O15049 544 aa21.21■□□□□ 0.99
VARS2-209ENST00000477288 RRAGBQ5VZM2 374 aa21.21■□□□□ 0.99
VARS2-209ENST00000477288 APBB1IPQ7Z5R6 666 aaPredicted RBP21.21■□□□□ 0.99
VARS2-209ENST00000477288 GJC1P36383 396 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 AFMP43652 599 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 NLRP3Q96P20 1036 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 HMG20BQ9P0W2 317 aa21.2■□□□□ 0.98
VARS2-209ENST00000477288 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
VARS2-209ENST00000477288 NEMFO60524 1076 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms