RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 RBM17Q96I25 401 aaKnown RBP5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 NLRP3Q96P20 1036 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 SMC4Q9NTJ3 1288 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 ARFGEF1Q9Y6D6 1849 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 ALDH1L1O75891 902 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 PCCAP05165 728 aaPredicted RBP5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 RLBP1P12271 317 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 KCNA3P22001 575 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 ALDH1B1P30837 517 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 POLA2Q14181 598 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 SOGA3Q5TF21 947 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 ZBTB38Q8NAP3 1195 aaPredicted RBP5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 LINS1Q8NG48 757 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 DDRGK1Q96HY6 314 aa5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 API5Q9BZZ5 524 aaKnown RBP5.22□□□□□ -1.57
GAPVD1-216ENST00000474637 KIF16BQ96L93 1317 aa5.21□□□□□ -1.57
GAPVD1-216ENST00000474637 CDHR2Q9BYE9 1310 aa5.21□□□□□ -1.57
GAPVD1-216ENST00000474637 ATP5J2-PTCD1G3V325 749 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 IPO8O15397 1037 aaKnown RBP5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 SRGNP10124 158 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 CHRNA5P30532 468 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 CRY2Q49AN0 593 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 NUTM1Q86Y26 1132 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 ARHGAP45Q92619 1136 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 RPGRQ92834 1020 aaKnown RBP5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 ZNF622Q969S3 477 aaKnown RBP eCLIP5.21□□□□□ -1.582e-7■□□□□ 9.2
GAPVD1-216ENST00000474637 DAXXQ9UER7 740 aaPredicted RBP5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 COL11A2P13942 1736 aaPredicted RBP5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 ABCC12Q96J65 1359 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 NEURL1BA8MQ27 555 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 HOXA10P31260 410 aaPredicted RBP5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 GRIPAP1Q4V328 841 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 CRAMP1Q96RY5 1269 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 PCDHB15Q9Y5E8 787 aa5.21□□□□□ -1.58
GAPVD1-216ENST00000474637 TNRC6CQ9HCJ0 1690 aaKnown RBP5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 DDX60Q8IY21 1712 aaKnown RBP5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 H7C1W4 665 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 IRS4O14654 1257 aaPredicted RBP5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 PDE8AO60658 829 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 IGKV5-2P06315 115 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 GCKRQ14397 625 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 BEND3Q5T5X7 828 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 TMC4Q7Z404 712 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 CCDC24Q8N4L8 307 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 PKNOX2Q96KN3 472 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 SRCIN1Q9C0H9 1055 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 BCS1LQ9Y276 419 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 ABCB7O75027 752 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 SEC24BO95487 1268 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 YBX3P16989 372 aaKnown RBP eCLIP5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 CCT4P50991 539 aaKnown RBP5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 SF3B3Q15393 1217 aaKnown RBP5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 CC2D2BQ6DHV5 1058 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 DDX46Q7L014 1031 aaKnown RBP5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 FAM89AQ96GI7 184 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 PLA2G12BQ9BX93 195 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 TMX4Q9H1E5 349 aaPredicted RBP5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 NOB1Q9ULX3 412 aaKnown RBP5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 HDAC5Q9UQL6 1122 aa5.2□□□□□ -1.58
GAPVD1-216ENST00000474637 F6X3S4 739 aa5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 BBOX1O75936 387 aa5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 HCLS1P14317 486 aaPredicted RBP5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 CWF19L2Q2TBE0 894 aaKnown RBP5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 CCDC152Q4G0S7 254 aa5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 PRPF40BQ6NWY9 871 aaKnown RBP5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 SLC4A10Q6U841 1118 aa5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 MYH3P11055 1940 aa5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 CHD4Q14839 1912 aa5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 MKRN4PQ13434 485 aaPredicted RBP5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 GRAPQ13588 217 aa5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 ZKSCAN2Q63HK3 967 aa5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 RTKN2Q8IZC4 609 aa5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 GRAPLQ8TC17 118 aaPredicted RBP5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 C9orf78Q9NZ63 289 aaPredicted RBP5.19□□□□□ -1.58
GAPVD1-216ENST00000474637 RTL9Q8NET4 1388 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 CACNA1SQ13698 1873 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 GRM8O00222 908 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 PPEF1O14829 653 aaPredicted RBP5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 CTSWP56202 376 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 GSE1Q14687 1217 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 CCDC93Q567U6 631 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 ARHGAP27Q6ZUM4 889 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 UBE3BQ7Z3V4 1068 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 DZIP1LQ8IYY4 767 aaKnown RBP5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 RWDD1Q9H446 243 aaPredicted RBP5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 UTYO14607 1347 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 ABCC4O15439 1325 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 LTBP3Q9NS15 1303 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 SLX4Q8IY92 1834 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 CASP7P55210 303 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 AAMPQ13685 434 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 MVPQ14764 893 aaKnown RBP5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 NFKBIBQ15653 356 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 ATF7IPQ6VMQ6 1270 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 C3orf67Q6ZVT6 689 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 SP8Q8IXZ3 490 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 FTSJ3Q8IY81 847 aaKnown RBP5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 SYNE4Q8N205 404 aa5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 CDC5LQ99459 802 aaKnown RBP5.18□□□□□ -1.58
GAPVD1-216ENST00000474637 FER1L6Q2WGJ9 1857 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms