RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 CACNA2D4Q7Z3S7 1137 aa20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 CCDC144CPQ8IYA2 1237 aa20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 C16orf71Q8IYS4 520 aaPredicted RBP20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 ARHGEF10O15013 1369 aa20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 SEPT7Q16181 437 aaKnown RBP20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 PARP10Q53GL7 1025 aa20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 CCDC148Q8NFR7 591 aa20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 B4DLN1 442 aa20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 MRPL12P52815 198 aaKnown RBP20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 MCMDC2Q4G0Z9 681 aa20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 IFIT1BQ5T764 474 aaKnown RBP20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 CAMK4Q16566 473 aa20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 ARHGAP29Q52LW3 1261 aa20.73■□□□□ 0.91
NOTCH4-204ENST00000474612 SPA17Q15506 151 aa20.72■□□□□ 0.91
NOTCH4-204ENST00000474612 A0A1W2PP64 1363 aa20.72■□□□□ 0.91
NOTCH4-204ENST00000474612 PICALMQ13492 652 aa20.72■□□□□ 0.91
NOTCH4-204ENST00000474612 ERMNQ8TAM6 284 aa20.72■□□□□ 0.91
NOTCH4-204ENST00000474612 VEZTQ9HBM0 779 aa20.72■□□□□ 0.91
NOTCH4-204ENST00000474612 SKIDA1Q1XH10 827 aa20.72■□□□□ 0.91
NOTCH4-204ENST00000474612 MAGEB6P1A0A0J9YX57 407 aa20.71■□□□□ 0.91
NOTCH4-204ENST00000474612 CNBD1Q8NA66 436 aa20.71■□□□□ 0.91
NOTCH4-204ENST00000474612 ZBTB43O43298 467 aa20.71■□□□□ 0.91
NOTCH4-204ENST00000474612 LMOD1P29536 600 aaPredicted RBP20.71■□□□□ 0.91
NOTCH4-204ENST00000474612 ZRSR2Q15696 482 aaKnown RBP20.71■□□□□ 0.91
NOTCH4-204ENST00000474612 DDX21Q9NR30 783 aaKnown RBP eCLIP20.71■□□□□ 0.91
NOTCH4-204ENST00000474612 IDEP14735 1019 aa20.7■□□□□ 0.91
NOTCH4-204ENST00000474612 CCDC183Q5T5S1 534 aa20.7■□□□□ 0.91
NOTCH4-204ENST00000474612 ORAI2Q96SN7 254 aa20.7■□□□□ 0.91
NOTCH4-204ENST00000474612 BABAM1Q9NWV8 329 aa20.7■□□□□ 0.91
NOTCH4-204ENST00000474612 BMP15O95972 392 aa20.7■□□□□ 0.9
NOTCH4-204ENST00000474612 SLAIN2Q9P270 581 aa20.7■□□□□ 0.9
NOTCH4-204ENST00000474612 GRPEL1Q9HAV7 217 aa20.7■□□□□ 0.9
NOTCH4-204ENST00000474612 KLF18A0A0U1RQI7 1052 aa20.7■□□□□ 0.9
NOTCH4-204ENST00000474612 TSHZ3Q63HK5 1081 aa20.7■□□□□ 0.9
NOTCH4-204ENST00000474612 KANK3Q6NY19 840 aa20.7■□□□□ 0.9
NOTCH4-204ENST00000474612 FAM177A1Q8N128 213 aaPredicted RBP20.7■□□□□ 0.9
NOTCH4-204ENST00000474612 ERLIN1O75477 346 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 GJB2P29033 226 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 LIG1P18858 919 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 NUCB1Q02818 461 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 AXDND1Q5T1B0 1012 aaPredicted RBP20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 TNNI2P48788 182 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 FSIP1Q8NA03 581 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 PAG1Q9NWQ8 432 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 SBNO1A3KN83 1393 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 PDE1AP54750 535 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 CCDC112Q8NEF3 446 aa20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 DDX19AQ9NUU7 478 aaKnown RBP20.69■□□□□ 0.9
NOTCH4-204ENST00000474612 RBM27Q9P2N5 1060 aaKnown RBP20.68■□□□□ 0.9
NOTCH4-204ENST00000474612 LDHBP07195 334 aaKnown RBP20.68■□□□□ 0.9
NOTCH4-204ENST00000474612 RTN1Q16799 776 aa20.68■□□□□ 0.9
NOTCH4-204ENST00000474612 MTERF4Q7Z6M4 381 aaKnown RBP20.68■□□□□ 0.9
NOTCH4-204ENST00000474612 TESK2Q96S53 571 aa20.68■□□□□ 0.9
NOTCH4-204ENST00000474612 TTC41PQ6P2S7 1318 aa20.67■□□□□ 0.9
NOTCH4-204ENST00000474612 BRF1Q92994 677 aa20.67■□□□□ 0.9
NOTCH4-204ENST00000474612 ATP7AQ04656 1500 aa20.67■□□□□ 0.9
NOTCH4-204ENST00000474612 STX6O43752 255 aa20.67■□□□□ 0.9
NOTCH4-204ENST00000474612 SFPQP23246 707 aaKnown RBP eCLIP20.67■□□□□ 0.9
NOTCH4-204ENST00000474612 RBM25P49756 843 aaKnown RBP20.67■□□□□ 0.9
NOTCH4-204ENST00000474612 RBM26Q5T8P6 1007 aaKnown RBP20.67■□□□□ 0.9
NOTCH4-204ENST00000474612 EDC4Q6P2E9 1401 aaKnown RBP20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 CALM1P0DP23 149 aa20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 CALM2P0DP24 149 aa20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 CALM3P0DP25 149 aa20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 SYCP3Q8IZU3 236 aa20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 ZSCAN16Q9H4T2 348 aaPredicted RBP20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 SYCE3A1L190 88 aa20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 SPDYE4A6NLX3 237 aa20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 RIMBP2O15034 1052 aa20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 TBCAO75347 108 aaKnown RBP20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 CWF19L2Q2TBE0 894 aaKnown RBP20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 ZNF790Q6PG37 636 aa20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 PARD3Q8TEW0 1356 aa20.66■□□□□ 0.9
NOTCH4-204ENST00000474612 SH3TC1Q8TE82 1336 aa20.65■□□□□ 0.9
NOTCH4-204ENST00000474612 VAMP4O75379 141 aa20.65■□□□□ 0.9
NOTCH4-204ENST00000474612 SDSP20132 328 aa20.65■□□□□ 0.9
NOTCH4-204ENST00000474612 GRM1Q13255 1194 aa20.65■□□□□ 0.9
NOTCH4-204ENST00000474612 TRMT1LQ7Z2T5 733 aaKnown RBP20.65■□□□□ 0.9
NOTCH4-204ENST00000474612 CCDC40Q4G0X9 1142 aa20.65■□□□□ 0.9
NOTCH4-204ENST00000474612 NEO1Q92859 1461 aa20.65■□□□□ 0.9
NOTCH4-204ENST00000474612 FAM114A1Q8IWE2 563 aa20.65■□□□□ 0.9
NOTCH4-204ENST00000474612 PLBD2Q8NHP8 589 aa20.65■□□□□ 0.9
NOTCH4-204ENST00000474612 RNF113AO15541 343 aaKnown RBP20.64■□□□□ 0.9
NOTCH4-204ENST00000474612 HELBQ8NG08 1087 aaPredicted RBP20.64■□□□□ 0.9
NOTCH4-204ENST00000474612 MCM9Q9NXL9 1143 aa20.64■□□□□ 0.9
NOTCH4-204ENST00000474612 MTIF2P46199 727 aaKnown RBP20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 CKAP2LQ8IYA6 745 aa20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 LARP6Q9BRS8 491 aaKnown RBP20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 USP21Q9UK80 565 aa20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 PA2G4Q9UQ80 394 aaKnown RBP20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 RBM8AQ9Y5S9 174 aaKnown RBP20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 HOXB7P09629 217 aa20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 SMARCC2Q8TAQ2 1214 aa20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 DENND2AQ9ULE3 1009 aa20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 RAB11FIP4Q86YS3 637 aa20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
NOTCH4-204ENST00000474612 ARHGEF12Q9NZN5 1544 aa20.63■□□□□ 0.89
NOTCH4-204ENST00000474612 TOP1P11387 765 aaKnown RBP20.63■□□□□ 0.89
NOTCH4-204ENST00000474612 TTC6Q86TZ1 520 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms