RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 EIF4G3O43432 1585 aaKnown RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC196A0A1B0GTZ2 297 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 RIOK3O14730 519 aaKnown RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 GKAP1Q5VSY0 366 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 INTS8Q75QN2 995 aaKnown RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 NCAPGQ9BPX3 1015 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 PPP1R12CQ9BZL4 782 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 CLSTN2Q9H4D0 955 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 SAMD15Q9P1V8 674 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 USP25Q9UHP3 1055 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 U3KPZ7 1027 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 ZEB2O60315 1214 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 NEDD9Q14511 834 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 CATIPQ7Z7H3 387 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 MAK16Q9BXY0 300 aaKnown RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 FRMD4BQ9Y2L6 1034 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 PCK1P35558 622 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 CCT2P78371 535 aaKnown RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 ARID5AQ03989 594 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 MCM6Q14566 821 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 CAPZA3Q96KX2 299 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 MRC2Q9UBG0 1479 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 TLDC2A0PJX2 215 aa7.84□□□□□ -1.16
BRCA1-210ENST00000471181 ZPR1O75312 459 aa7.84□□□□□ -1.16
BRCA1-210ENST00000471181 INPP1P49441 399 aa7.84□□□□□ -1.16
BRCA1-210ENST00000471181 GSDMDP57764 484 aa7.84□□□□□ -1.16
BRCA1-210ENST00000471181 PPP1R7Q15435 360 aa7.84□□□□□ -1.16
BRCA1-210ENST00000471181 ZNF530Q6P9A1 599 aaPredicted RBP7.84□□□□□ -1.16
BRCA1-210ENST00000471181 FMNL3Q8IVF7 1028 aa7.84□□□□□ -1.16
BRCA1-210ENST00000471181 LUC7L2Q9Y383 392 aaKnown RBP7.84□□□□□ -1.16
BRCA1-210ENST00000471181 CTAGE15A4D2H0 777 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 CTAGE8P0CG41 777 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 ATP11AP98196 1134 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 CTAGE6Q86UF2 777 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 IQCA1Q86XH1 822 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 CTAGE4Q8IX94 777 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 RAB3IPQ96QF0 476 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-210ENST00000471181 TSPYL2Q9H2G4 693 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-210ENST00000471181 KIF21BO75037 1637 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 IFIT3O14879 490 aaKnown RBP7.83□□□□□ -1.16
BRCA1-210ENST00000471181 SMIM24O75264 130 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 PTGS1P23219 599 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 STX1AQ16623 288 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 GBP6Q6ZN66 633 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 BAG1Q99933 345 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-210ENST00000471181 BTBD11A6QL63 1104 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 TXNDC9O14530 226 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 RRAGBQ5VZM2 374 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 IFT81Q8WYA0 676 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 PPP1R12AO14974 1030 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-210ENST00000471181 CHD1LQ86WJ1 897 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 CACNA2D3Q8IZS8 1091 aa7.83□□□□□ -1.16
BRCA1-210ENST00000471181 RPGRQ92834 1020 aaKnown RBP7.83□□□□□ -1.16
BRCA1-210ENST00000471181 CNTLNQ9NXG0 1405 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 RAB11FIP4Q86YS3 637 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 PSPC1Q8WXF1 523 aaKnown RBP7.82□□□□□ -1.16
BRCA1-210ENST00000471181 SHROOM2Q13796 1616 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-210ENST00000471181 GOLIM4O00461 696 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 N4BP3O15049 544 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 ATP6V1E1P36543 226 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 PRPHP41219 470 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 PPP2R5DQ14738 602 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 GSDMBQ8TAX9 411 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 MORC4Q8TE76 937 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 RNF34Q969K3 372 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 IMPG2Q9BZV3 1241 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 PPANQ9NQ55 473 aaKnown RBP7.82□□□□□ -1.16
BRCA1-210ENST00000471181 IFIT1P09914 478 aaKnown RBP7.82□□□□□ -1.16
BRCA1-210ENST00000471181 ERCC6LQ2NKX8 1250 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 SDCCAG8Q86SQ7 713 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-210ENST00000471181 CABP5Q9NP86 173 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 VPS18Q9P253 973 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 NEMFO60524 1076 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 MCM4P33991 863 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 HSP90AA4PQ58FG1 418 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 SH2D4BQ5SQS7 431 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 LARP6Q9BRS8 491 aaKnown RBP7.82□□□□□ -1.16
BRCA1-210ENST00000471181 KAT14Q9H8E8 782 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 E7EVH7 732 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 CTAGE5O15320 804 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 USP37Q86T82 979 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 LMNTD2Q8IXW0 634 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 UBLCP1Q8WVY7 318 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-210ENST00000471181 AKAP2Q9Y2D5 859 aa7.82□□□□□ -1.16
BRCA1-210ENST00000471181 CCDC171Q6TFL3 1326 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 ZNF213O14771 459 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 VIMP08670 466 aaKnown RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 CAPN2P17655 700 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 MCM10Q7L590 875 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 NOP9Q86U38 636 aaKnown RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 TCP11L2Q8N4U5 519 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 CXorf38Q8TB03 319 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 PNISRQ8TF01 805 aaKnown RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 LRRC27Q9C0I9 530 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 DHX57Q6P158 1386 aaKnown RBP7.81□□□□□ -1.16
BRCA1-210ENST00000471181 A0A1B0GUL7 405 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 PPFIA3O75145 1194 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 GBP1P32455 592 aa7.81□□□□□ -1.16
BRCA1-210ENST00000471181 ZNF131P52739 623 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms