RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 SUPT20HQ8NEM7 779 aa16.01■□□□□ 0.15
VPS26A-204ENST00000467852 SHTN1A0MZ66 631 aa16■□□□□ 0.15
VPS26A-204ENST00000467852 PPEF1O14829 653 aaPredicted RBP16■□□□□ 0.15
VPS26A-204ENST00000467852 TM4SF4P48230 202 aa16■□□□□ 0.15
VPS26A-204ENST00000467852 SAMD7Q7Z3H4 446 aa16■□□□□ 0.15
VPS26A-204ENST00000467852 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
VPS26A-204ENST00000467852 HTTP42858 3142 aa15.99■□□□□ 0.15
VPS26A-204ENST00000467852 BRCA2P51587 3418 aa15.99■□□□□ 0.15
VPS26A-204ENST00000467852 MKRN4PQ13434 485 aaPredicted RBP15.99■□□□□ 0.15
VPS26A-204ENST00000467852 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
VPS26A-204ENST00000467852 SULF1Q8IWU6 871 aa15.99■□□□□ 0.15
VPS26A-204ENST00000467852 ZNF496Q96IT1 587 aaPredicted RBP15.99■□□□□ 0.15
VPS26A-204ENST00000467852 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
VPS26A-204ENST00000467852 RANBP2P49792 3224 aaKnown RBP15.98■□□□□ 0.15
VPS26A-204ENST00000467852 TBC1D10BQ4KMP7 808 aaPredicted RBP15.98■□□□□ 0.15
VPS26A-204ENST00000467852 RBM17Q96I25 401 aaKnown RBP15.98■□□□□ 0.15
VPS26A-204ENST00000467852 COL25A1Q9BXS0 654 aaPredicted RBP15.98■□□□□ 0.15
VPS26A-204ENST00000467852 FKBP1BP68106 108 aa15.97■□□□□ 0.15
VPS26A-204ENST00000467852 OTOP1Q7RTM1 612 aa15.97■□□□□ 0.15
VPS26A-204ENST00000467852 DPF2Q92785 391 aa15.97■□□□□ 0.15
VPS26A-204ENST00000467852 CFHR5Q9BXR6 569 aa15.97■□□□□ 0.15
VPS26A-204ENST00000467852 KIF7Q2M1P5 1343 aa15.96■□□□□ 0.15
VPS26A-204ENST00000467852 SREBF2Q12772 1141 aa15.96■□□□□ 0.15
VPS26A-204ENST00000467852 ARMC5Q96C12 935 aa15.96■□□□□ 0.15
VPS26A-204ENST00000467852 CDCA5Q96FF9 252 aa15.96■□□□□ 0.15
VPS26A-204ENST00000467852 CRAMP1Q96RY5 1269 aa15.96■□□□□ 0.15
VPS26A-204ENST00000467852 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
VPS26A-204ENST00000467852 PRAMEF22A3QJZ6 481 aa15.95■□□□□ 0.14
VPS26A-204ENST00000467852 RGL2O15211 777 aa15.95■□□□□ 0.14
VPS26A-204ENST00000467852 RBM26Q5T8P6 1007 aaKnown RBP15.95■□□□□ 0.14
VPS26A-204ENST00000467852 ZNF790Q6PG37 636 aa15.95■□□□□ 0.14
VPS26A-204ENST00000467852 PTPN22Q9Y2R2 807 aa15.95■□□□□ 0.14
VPS26A-204ENST00000467852 FMNL2Q96PY5 1086 aa15.94■□□□□ 0.14
VPS26A-204ENST00000467852 R3HDMLQ9H3Y0 253 aa15.94■□□□□ 0.14
VPS26A-204ENST00000467852 KIAA2012Q0VF49 1180 aa15.93■□□□□ 0.14
VPS26A-204ENST00000467852 DPF3Q92784 378 aa15.93■□□□□ 0.14
VPS26A-204ENST00000467852 RTFDC1Q9BY42 306 aaPredicted RBP15.93■□□□□ 0.14
VPS26A-204ENST00000467852 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
VPS26A-204ENST00000467852 ATP6V0A2Q9Y487 856 aa15.93■□□□□ 0.14
VPS26A-204ENST00000467852 ALDH1A1P00352 501 aa15.92■□□□□ 0.14
VPS26A-204ENST00000467852 DPP8Q6V1X1 898 aaPredicted RBP15.92■□□□□ 0.14
VPS26A-204ENST00000467852 ANKRD13DQ6ZTN6 518 aa15.92■□□□□ 0.14
VPS26A-204ENST00000467852 SLC51AQ86UW1 340 aa15.92■□□□□ 0.14
VPS26A-204ENST00000467852 NUTM1Q86Y26 1132 aa15.92■□□□□ 0.14
VPS26A-204ENST00000467852 UNC80Q8N2C7 3258 aa15.92■□□□□ 0.14
VPS26A-204ENST00000467852 EGFRP00533 1210 aa15.91■□□□□ 0.14
VPS26A-204ENST00000467852 PIP4K2AP48426 406 aaPredicted RBP15.91■□□□□ 0.14
VPS26A-204ENST00000467852 SLC4A8Q2Y0W8 1093 aa15.91■□□□□ 0.14
VPS26A-204ENST00000467852 TEFQ10587 303 aa15.9■□□□□ 0.14
VPS26A-204ENST00000467852 NBPF11Q86T75 865 aa15.9■□□□□ 0.14
VPS26A-204ENST00000467852 ERO1AQ96HE7 468 aa15.9■□□□□ 0.14
VPS26A-204ENST00000467852 GGA3Q9NZ52 723 aa15.9■□□□□ 0.14
VPS26A-204ENST00000467852 RIC1Q4ADV7 1423 aa15.9■□□□□ 0.14
VPS26A-204ENST00000467852 ABCC12Q96J65 1359 aa15.89■□□□□ 0.13
VPS26A-204ENST00000467852 YDJCA8MPS7 323 aa15.89■□□□□ 0.13
VPS26A-204ENST00000467852 RPS12P25398 132 aaKnown RBP15.89■□□□□ 0.13
VPS26A-204ENST00000467852 MKRN3Q13064 507 aaKnown RBP15.89■□□□□ 0.13
VPS26A-204ENST00000467852 KIF4BQ2VIQ3 1234 aa15.89■□□□□ 0.13
VPS26A-204ENST00000467852 MPNDQ8N594 471 aa15.89■□□□□ 0.13
VPS26A-204ENST00000467852 PRDM6Q9NQX0 595 aa15.89■□□□□ 0.13
VPS26A-204ENST00000467852 A0A1W2PPC1 479 aa15.88■□□□□ 0.13
VPS26A-204ENST00000467852 UBE2Q2LH0YL09 131 aa15.88■□□□□ 0.13
VPS26A-204ENST00000467852 PSMD14O00487 310 aa15.88■□□□□ 0.13
VPS26A-204ENST00000467852 ZNF333Q96JL9 665 aa15.88■□□□□ 0.13
VPS26A-204ENST00000467852 PRO3102Q9H379 93 aa15.88■□□□□ 0.13
VPS26A-204ENST00000467852 EFCC1Q9HA90 598 aa15.88■□□□□ 0.13
VPS26A-204ENST00000467852 TTLL12Q14166 644 aaPredicted RBP15.87■□□□□ 0.13
VPS26A-204ENST00000467852 HLFQ16534 295 aa15.87■□□□□ 0.13
VPS26A-204ENST00000467852 MTHFSDQ2M296 383 aaKnown RBP15.87■□□□□ 0.13
VPS26A-204ENST00000467852 MOB2Q70IA6 237 aa15.87■□□□□ 0.13
VPS26A-204ENST00000467852 LRCH3Q96II8 777 aa15.87■□□□□ 0.13
VPS26A-204ENST00000467852 USP16Q9Y5T5 823 aa15.87■□□□□ 0.13
VPS26A-204ENST00000467852 SOX1O00570 391 aaPredicted RBP15.86■□□□□ 0.13
VPS26A-204ENST00000467852 STXBP5LQ9Y2K9 1186 aa15.86■□□□□ 0.13
VPS26A-204ENST00000467852 IL13P35225 146 aa15.85■□□□□ 0.13
VPS26A-204ENST00000467852 TCIRG1Q13488 830 aa15.85■□□□□ 0.13
VPS26A-204ENST00000467852 SP8Q8IXZ3 490 aa15.85■□□□□ 0.13
VPS26A-204ENST00000467852 SLC9C1Q4G0N8 1177 aa15.84■□□□□ 0.13
VPS26A-204ENST00000467852 ANGEL2Q5VTE6 544 aaKnown RBP15.84■□□□□ 0.13
VPS26A-204ENST00000467852 CD99L2Q8TCZ2 262 aa15.84■□□□□ 0.13
VPS26A-204ENST00000467852 NR2E3Q9Y5X4 410 aa15.84■□□□□ 0.13
VPS26A-204ENST00000467852 BBOX1O75936 387 aa15.83■□□□□ 0.12
VPS26A-204ENST00000467852 INHBEP58166 350 aa15.83■□□□□ 0.12
VPS26A-204ENST00000467852 GPR153Q6NV75 609 aa15.83■□□□□ 0.12
VPS26A-204ENST00000467852 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.83■□□□□ 0.12
VPS26A-204ENST00000467852 DEFB123Q8N688 67 aa15.83■□□□□ 0.12
VPS26A-204ENST00000467852 NLRP3Q96P20 1036 aa15.83■□□□□ 0.12
VPS26A-204ENST00000467852 SCARF1Q14162 830 aa15.82■□□□□ 0.12
VPS26A-204ENST00000467852 ASTN2O75129 1339 aaPredicted RBP15.82■□□□□ 0.12
VPS26A-204ENST00000467852 NUP98P52948 1817 aa15.82■□□□□ 0.12
VPS26A-204ENST00000467852 LAMA3Q16787 3333 aa15.81■□□□□ 0.12
VPS26A-204ENST00000467852 WTIPA6NIX2 430 aaPredicted RBP15.81■□□□□ 0.12
VPS26A-204ENST00000467852 ZNF609O15014 1411 aa15.81■□□□□ 0.12
VPS26A-204ENST00000467852 HMOX1P09601 288 aa15.81■□□□□ 0.12
VPS26A-204ENST00000467852 HTATIP2Q9BUP3 242 aa15.81■□□□□ 0.12
VPS26A-204ENST00000467852 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
VPS26A-204ENST00000467852 ABCC4O15439 1325 aa15.8■□□□□ 0.12
VPS26A-204ENST00000467852 MANSC4A6NHS7 340 aaPredicted RBP15.8■□□□□ 0.12
VPS26A-204ENST00000467852 BTBD11A6QL63 1104 aa15.8■□□□□ 0.12
VPS26A-204ENST00000467852 NF2P35240 595 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms