RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 RTFDC1Q9BY42 306 aaPredicted RBP11.24□□□□□ -0.61
DDR1-242ENST00000465966 GLIS2Q9BZE0 524 aaPredicted RBP11.24□□□□□ -0.61
DDR1-242ENST00000465966 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
DDR1-242ENST00000465966 CACNA1SQ13698 1873 aa11.23□□□□□ -0.61
DDR1-242ENST00000465966 H7C1D1 291 aa11.23□□□□□ -0.61
DDR1-242ENST00000465966 CENPBP07199 599 aaPredicted RBP11.23□□□□□ -0.61
DDR1-242ENST00000465966 EIF4A1P60842 406 aaKnown RBP11.23□□□□□ -0.61
DDR1-242ENST00000465966 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
DDR1-242ENST00000465966 MPNDQ8N594 471 aa11.23□□□□□ -0.61
DDR1-242ENST00000465966 ERBB4Q15303 1308 aa11.23□□□□□ -0.61
DDR1-242ENST00000465966 COL4A5P29400 1685 aa11.23□□□□□ -0.61
DDR1-242ENST00000465966 RAD17O75943 681 aa11.22□□□□□ -0.61
DDR1-242ENST00000465966 HUNKP57058 714 aa11.22□□□□□ -0.61
DDR1-242ENST00000465966 HNRNPUQ00839 825 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDR1-242ENST00000465966 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
DDR1-242ENST00000465966 SLC10A5Q5PT55 438 aa11.22□□□□□ -0.61
DDR1-242ENST00000465966 C3orf67Q6ZVT6 689 aa11.22□□□□□ -0.61
DDR1-242ENST00000465966 CNOT7Q9UIV1 285 aaKnown RBP11.22□□□□□ -0.61
DDR1-242ENST00000465966 THSD7BQ9C0I4 1608 aa11.21□□□□□ -0.61
DDR1-242ENST00000465966 ABCC4O15439 1325 aa11.21□□□□□ -0.61
DDR1-242ENST00000465966 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
DDR1-242ENST00000465966 USP48Q86UV5 1035 aa11.21□□□□□ -0.61
DDR1-242ENST00000465966 PNNQ9H307 717 aaKnown RBP11.21□□□□□ -0.61
DDR1-242ENST00000465966 LTBP1Q14766 1721 aa11.21□□□□□ -0.62
DDR1-242ENST00000465966 HIRAP54198 1017 aaPredicted RBP11.2□□□□□ -0.62
DDR1-242ENST00000465966 HSP90AB3PQ58FF7 597 aa11.2□□□□□ -0.62
DDR1-242ENST00000465966 RGMBQ6NW40 437 aa11.2□□□□□ -0.62
DDR1-242ENST00000465966 TMC4Q7Z404 712 aa11.2□□□□□ -0.62
DDR1-242ENST00000465966 SLC51AQ86UW1 340 aa11.2□□□□□ -0.62
DDR1-242ENST00000465966 MICALL2Q8IY33 904 aa11.2□□□□□ -0.62
DDR1-242ENST00000465966 C2orf69Q8N8R5 385 aa11.2□□□□□ -0.62
DDR1-242ENST00000465966 CCDC102AQ96A19 550 aa11.2□□□□□ -0.62
DDR1-242ENST00000465966 SAGE1Q9NXZ1 904 aa11.2□□□□□ -0.62
DDR1-242ENST00000465966 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
DDR1-242ENST00000465966 GRAPQ13588 217 aa11.19□□□□□ -0.62
DDR1-242ENST00000465966 GRAPLQ8TC17 118 aaPredicted RBP11.19□□□□□ -0.62
DDR1-242ENST00000465966 TRPM4Q8TD43 1214 aa11.19□□□□□ -0.62
DDR1-242ENST00000465966 DPF2Q92785 391 aa11.19□□□□□ -0.62
DDR1-242ENST00000465966 HCLS1P14317 486 aaPredicted RBP11.18□□□□□ -0.62
DDR1-242ENST00000465966 NFE2L2Q16236 605 aa11.18□□□□□ -0.62
DDR1-242ENST00000465966 WASHC4Q2M389 1173 aa11.18□□□□□ -0.62
DDR1-242ENST00000465966 KRT26Q7Z3Y9 468 aa11.18□□□□□ -0.62
DDR1-242ENST00000465966 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
DDR1-242ENST00000465966 GBA2Q9HCG7 927 aaPredicted RBP11.18□□□□□ -0.62
DDR1-242ENST00000465966 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
DDR1-242ENST00000465966 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
DDR1-242ENST00000465966 ZBED9Q6R2W3 1325 aa11.17□□□□□ -0.62
DDR1-242ENST00000465966 SH3TC1Q8TE82 1336 aa11.17□□□□□ -0.62
DDR1-242ENST00000465966 MAPK8IP3Q9UPT6 1336 aa11.17□□□□□ -0.62
DDR1-242ENST00000465966 RPS12P25398 132 aaKnown RBP11.17□□□□□ -0.62
DDR1-242ENST00000465966 ZNF157P51786 506 aaPredicted RBP11.17□□□□□ -0.62
DDR1-242ENST00000465966 WDR43Q15061 677 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDR1-242ENST00000465966 ZIC5Q96T25 663 aa11.17□□□□□ -0.62
DDR1-242ENST00000465966 THUMPD2Q9BTF0 503 aaKnown RBP11.17□□□□□ -0.62
DDR1-242ENST00000465966 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
DDR1-242ENST00000465966 YDJCA8MPS7 323 aa11.16□□□□□ -0.62
DDR1-242ENST00000465966 TRPA1O75762 1119 aa11.16□□□□□ -0.62
DDR1-242ENST00000465966 KIF23Q02241 960 aaPredicted RBP11.16□□□□□ -0.62
DDR1-242ENST00000465966 AIMP1Q12904 312 aaKnown RBP11.16□□□□□ -0.62
DDR1-242ENST00000465966 RBM26Q5T8P6 1007 aaKnown RBP11.16□□□□□ -0.62
DDR1-242ENST00000465966 SAMD7Q7Z3H4 446 aa11.16□□□□□ -0.62
DDR1-242ENST00000465966 NLRP10Q86W26 655 aa11.16□□□□□ -0.62
DDR1-242ENST00000465966 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
DDR1-242ENST00000465966 EYA3Q99504 573 aa11.16□□□□□ -0.62
DDR1-242ENST00000465966 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
DDR1-242ENST00000465966 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
DDR1-242ENST00000465966 SHTN1A0MZ66 631 aa11.15□□□□□ -0.62
DDR1-242ENST00000465966 FAM155AB1AL88 458 aaPredicted RBP11.15□□□□□ -0.62
DDR1-242ENST00000465966 C6orf229H3BNL8 230 aa11.15□□□□□ -0.62
DDR1-242ENST00000465966 PSMD14O00487 310 aa11.15□□□□□ -0.62
DDR1-242ENST00000465966 TCIRG1Q13488 830 aa11.15□□□□□ -0.62
DDR1-242ENST00000465966 PDIA6Q15084 440 aa11.15□□□□□ -0.62
DDR1-242ENST00000465966 TBC1D10BQ4KMP7 808 aaPredicted RBP11.15□□□□□ -0.62
DDR1-242ENST00000465966 COPS6Q7L5N1 327 aa11.15□□□□□ -0.62
DDR1-242ENST00000465966 SULF1Q8IWU6 871 aa11.15□□□□□ -0.62
DDR1-242ENST00000465966 PLEKHF1Q96S99 279 aa11.15□□□□□ -0.62
DDR1-242ENST00000465966 RNF186Q9NXI6 227 aa11.15□□□□□ -0.62
DDR1-242ENST00000465966 SOX10P56693 466 aa11.14□□□□□ -0.63
DDR1-242ENST00000465966 LRP10Q7Z4F1 713 aa11.14□□□□□ -0.63
DDR1-242ENST00000465966 CTU1Q7Z7A3 348 aaKnown RBP11.14□□□□□ -0.63
DDR1-242ENST00000465966 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
DDR1-242ENST00000465966 DBNDD1Q9H9R9 158 aa11.14□□□□□ -0.63
DDR1-242ENST00000465966 BABAM1Q9NWV8 329 aa11.14□□□□□ -0.63
DDR1-242ENST00000465966 ADM5C9JUS6 153 aa11.13□□□□□ -0.63
DDR1-242ENST00000465966 G3V3G9 751 aa11.13□□□□□ -0.63
DDR1-242ENST00000465966 RIMBP2O15034 1052 aa11.13□□□□□ -0.63
DDR1-242ENST00000465966 ANXA1P04083 346 aa11.13□□□□□ -0.63
DDR1-242ENST00000465966 PROSER3Q2NL68 480 aa11.13□□□□□ -0.63
DDR1-242ENST00000465966 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
DDR1-242ENST00000465966 DCAF8Q5TAQ9 597 aa11.13□□□□□ -0.63
DDR1-242ENST00000465966 DLK2Q6UY11 383 aa11.13□□□□□ -0.63
DDR1-242ENST00000465966 LAMB4A4D0S4 1761 aa11.13□□□□□ -0.63
DDR1-242ENST00000465966 TRPM7Q96QT4 1865 aa11.12□□□□□ -0.63
DDR1-242ENST00000465966 ECE2O60344 883 aa11.12□□□□□ -0.63
DDR1-242ENST00000465966 SLC10A3P09131 477 aa11.12□□□□□ -0.63
DDR1-242ENST00000465966 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
DDR1-242ENST00000465966 PKN2Q16513 984 aaKnown RBP11.12□□□□□ -0.63
DDR1-242ENST00000465966 PRPF38BQ5VTL8 546 aaKnown RBP11.12□□□□□ -0.63
DDR1-242ENST00000465966 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
DDR1-242ENST00000465966 CSRNP1Q96S65 589 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms