RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 ATP2B4P23634 1241 aa8.46□□□□□ -1.06
USP25-207ENST00000464435 ARID4AP29374 1257 aaPredicted RBP8.46□□□□□ -1.06
USP25-207ENST00000464435 TREML1Q86YW5 311 aa8.46□□□□□ -1.06
USP25-207ENST00000464435 RAB44Q7Z6P3 723 aaPredicted RBP8.45□□□□□ -1.06
USP25-207ENST00000464435 KRTAP9-2Q9BYQ4 174 aa8.45□□□□□ -1.06
USP25-207ENST00000464435 GRNP28799 593 aaKnown RBP8.44□□□□□ -1.06
USP25-207ENST00000464435 KCNA1Q09470 495 aa8.44□□□□□ -1.06
USP25-207ENST00000464435 UBE2OQ9C0C9 1292 aaKnown RBP8.44□□□□□ -1.06
USP25-207ENST00000464435 RTCBQ9Y3I0 505 aaKnown RBP8.44□□□□□ -1.06
USP25-207ENST00000464435 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
USP25-207ENST00000464435 NFKB1P19838 968 aa8.43□□□□□ -1.06
USP25-207ENST00000464435 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
USP25-207ENST00000464435 C20orf204Q6ZNR8 217 aa8.43□□□□□ -1.06
USP25-207ENST00000464435 MICALL1Q8N3F8 863 aa8.43□□□□□ -1.06
USP25-207ENST00000464435 ABTB2Q8N961 1025 aa8.43□□□□□ -1.06
USP25-207ENST00000464435 SAP130Q9H0E3 1048 aa8.43□□□□□ -1.06
USP25-207ENST00000464435 GZF1Q9H116 711 aaPredicted RBP8.43□□□□□ -1.06
USP25-207ENST00000464435 STIM2Q9P246 746 aa8.43□□□□□ -1.06
USP25-207ENST00000464435 STARD13Q9Y3M8 1113 aa8.43□□□□□ -1.06
USP25-207ENST00000464435 M0R082 166 aa8.42□□□□□ -1.06
USP25-207ENST00000464435 ETFBKMTQ8IXQ9 262 aa8.42□□□□□ -1.06
USP25-207ENST00000464435 ZNF417Q8TAU3 575 aa8.42□□□□□ -1.06
USP25-207ENST00000464435 ZNF587Q96SQ5 575 aaPredicted RBP8.42□□□□□ -1.06
USP25-207ENST00000464435 MKNK1Q9BUB5 465 aa8.42□□□□□ -1.06
USP25-207ENST00000464435 SUV39H2Q9H5I1 410 aa8.42□□□□□ -1.06
USP25-207ENST00000464435 DNAJB12Q9NXW2 375 aaKnown RBP8.42□□□□□ -1.06
USP25-207ENST00000464435 SLC6A14Q9UN76 642 aa8.42□□□□□ -1.06
USP25-207ENST00000464435 IVNS1ABPQ9Y6Y0 642 aa8.42□□□□□ -1.06
USP25-207ENST00000464435 TNFRSF10BO14763 440 aa8.41□□□□□ -1.06
USP25-207ENST00000464435 TRPM4Q8TD43 1214 aa8.41□□□□□ -1.06
USP25-207ENST00000464435 PIK3R5Q8WYR1 880 aa8.41□□□□□ -1.06
USP25-207ENST00000464435 LILRB5O75023 590 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 XYLBO75191 536 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 ALBP02768 609 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 RARAP10276 462 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 SSFA2P28290 1259 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 NAA30Q147X3 362 aaPredicted RBP8.4□□□□□ -1.06
USP25-207ENST00000464435 RGL4Q8IZJ4 473 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 CMTR1Q8N1G2 835 aaKnown RBP8.4□□□□□ -1.06
USP25-207ENST00000464435 TRIM11Q96F44 468 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 PLVAPQ9BX97 442 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 FRRS1LQ9P0K9 344 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 MTMR7Q9Y216 660 aa8.4□□□□□ -1.06
USP25-207ENST00000464435 FNDC3AQ9Y2H6 1198 aaKnown RBP8.4□□□□□ -1.06
USP25-207ENST00000464435 SPATA31C1P0DKV0 1188 aa8.39□□□□□ -1.07
USP25-207ENST00000464435 NRLP54845 237 aa8.39□□□□□ -1.07
USP25-207ENST00000464435 GPLD1P80108 840 aa8.39□□□□□ -1.07
USP25-207ENST00000464435 CAPN12Q6ZSI9 719 aa8.39□□□□□ -1.07
USP25-207ENST00000464435 DHX32Q7L7V1 743 aaKnown RBP8.39□□□□□ -1.07
USP25-207ENST00000464435 TTC9Q92623 222 aa8.39□□□□□ -1.07
USP25-207ENST00000464435 TLR7Q9NYK1 1049 aaKnown RBP8.39□□□□□ -1.07
USP25-207ENST00000464435 ZFATQ9P243 1243 aa8.39□□□□□ -1.07
USP25-207ENST00000464435 KCNMB2Q9Y691 235 aa8.39□□□□□ -1.07
USP25-207ENST00000464435 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
USP25-207ENST00000464435 SASH3O75995 380 aa8.38□□□□□ -1.07
USP25-207ENST00000464435 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
USP25-207ENST00000464435 HOXD8P13378 290 aaPredicted RBP8.38□□□□□ -1.07
USP25-207ENST00000464435 TARSP26639 723 aaKnown RBP8.38□□□□□ -1.07
USP25-207ENST00000464435 SOX18P35713 384 aa8.38□□□□□ -1.07
USP25-207ENST00000464435 SCNN1AP37088 669 aa8.38□□□□□ -1.07
USP25-207ENST00000464435 COL9A3Q14050 684 aaPredicted RBP8.38□□□□□ -1.07
USP25-207ENST00000464435 PRRT3Q5FWE3 981 aa8.38□□□□□ -1.07
USP25-207ENST00000464435 IGFLR1Q9H665 355 aa8.38□□□□□ -1.07
USP25-207ENST00000464435 CCDC9Q9Y3X0 531 aaKnown RBP8.38□□□□□ -1.07
USP25-207ENST00000464435 PATL2C9JE40 543 aaKnown RBP8.37□□□□□ -1.07
USP25-207ENST00000464435 NID1P14543 1247 aa8.37□□□□□ -1.07
USP25-207ENST00000464435 ITGB7P26010 798 aa8.37□□□□□ -1.07
USP25-207ENST00000464435 ZAP70P43403 619 aa8.37□□□□□ -1.07
USP25-207ENST00000464435 TBC1D8BQ0IIM8 1120 aa8.37□□□□□ -1.07
USP25-207ENST00000464435 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
USP25-207ENST00000464435 CD163Q86VB7 1156 aa8.37□□□□□ -1.07
USP25-207ENST00000464435 NLRP13Q86W25 1043 aa8.37□□□□□ -1.07
USP25-207ENST00000464435 HELQQ8TDG4 1101 aa8.37□□□□□ -1.07
USP25-207ENST00000464435 RGS9O75916 674 aaPredicted RBP8.36□□□□□ -1.07
USP25-207ENST00000464435 PSAPP07602 524 aa8.36□□□□□ -1.07
USP25-207ENST00000464435 PLAURQ03405 335 aa8.36□□□□□ -1.07
USP25-207ENST00000464435 TMCO4Q5TGY1 634 aa8.36□□□□□ -1.07
USP25-207ENST00000464435 PSAPL1Q6NUJ1 521 aa8.36□□□□□ -1.07
USP25-207ENST00000464435 KRT25Q7Z3Z0 450 aa8.36□□□□□ -1.07
USP25-207ENST00000464435 FAM35AQ86V20 835 aa8.36□□□□□ -1.07
USP25-207ENST00000464435 TRIM28Q13263 835 aaKnown RBP8.35□□□□□ -1.07
USP25-207ENST00000464435 JPH1Q9HDC5 661 aaPredicted RBP8.35□□□□□ -1.07
USP25-207ENST00000464435 SEPT3Q9UH03 358 aa8.35□□□□□ -1.07
USP25-207ENST00000464435 GNEQ9Y223 722 aaKnown RBP8.35□□□□□ -1.07
USP25-207ENST00000464435 ZBTB42B2RXF5 422 aa8.34□□□□□ -1.07
USP25-207ENST00000464435 UBAP1LF5GYI3 381 aa8.34□□□□□ -1.07
USP25-207ENST00000464435 CHRNA4P43681 627 aa8.34□□□□□ -1.07
USP25-207ENST00000464435 ALKBH2Q6NS38 261 aa8.34□□□□□ -1.07
USP25-207ENST00000464435 TXNDC2Q86VQ3 553 aa8.34□□□□□ -1.07
USP25-207ENST00000464435 KRTAP1-3Q8IUG1 177 aa8.34□□□□□ -1.07
USP25-207ENST00000464435 NACC1Q96RE7 527 aa8.34□□□□□ -1.07
USP25-207ENST00000464435 USP20Q9Y2K6 914 aa8.34□□□□□ -1.07
USP25-207ENST00000464435 AFF1P51825 1210 aaKnown RBP8.33□□□□□ -1.08
USP25-207ENST00000464435 FAM26DQ5JW98 314 aa8.33□□□□□ -1.08
USP25-207ENST00000464435 NAGPAQ9UK23 515 aa8.33□□□□□ -1.08
USP25-207ENST00000464435 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
USP25-207ENST00000464435 MMP20O60882 483 aa8.32□□□□□ -1.08
USP25-207ENST00000464435 APBA3O96018 575 aa8.32□□□□□ -1.08
USP25-207ENST00000464435 PCSK2P16519 638 aa8.32□□□□□ -1.08
USP25-207ENST00000464435 NPR3P17342 541 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms