RNA–Protein interactions for RNA: ENST00000462483.1

CDK16-205, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-205ENST00000462483 PRAMEF22A3QJZ6 481 aa10.88□□□□□ -0.67
CDK16-205ENST00000462483 APLP1P51693 650 aa10.88□□□□□ -0.67
CDK16-205ENST00000462483 LMOD3Q0VAK6 560 aa10.88□□□□□ -0.67
CDK16-205ENST00000462483 RBM26Q5T8P6 1007 aaKnown RBP10.88□□□□□ -0.67
CDK16-205ENST00000462483 FMNL2Q96PY5 1086 aa10.88□□□□□ -0.67
CDK16-205ENST00000462483 SPON1Q9HCB6 807 aa10.88□□□□□ -0.67
CDK16-205ENST00000462483 NRXN2Q9P2S2 1712 aa10.87□□□□□ -0.67
CDK16-205ENST00000462483 CYP19A1P11511 503 aaPredicted RBP10.87□□□□□ -0.67
CDK16-205ENST00000462483 TAF7Q15545 349 aaPredicted RBP10.87□□□□□ -0.67
CDK16-205ENST00000462483 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
CDK16-205ENST00000462483 MTRQ99707 1265 aa10.87□□□□□ -0.67
CDK16-205ENST00000462483 LAS1LQ9Y4W2 734 aaKnown RBP10.87□□□□□ -0.67
CDK16-205ENST00000462483 CHD4Q14839 1912 aa10.86□□□□□ -0.67
CDK16-205ENST00000462483 TESPA1A2RU30 521 aaPredicted RBP10.86□□□□□ -0.67
CDK16-205ENST00000462483 SSFA2P28290 1259 aa10.86□□□□□ -0.67
CDK16-205ENST00000462483 INTS5Q6P9B9 1019 aaKnown RBP10.86□□□□□ -0.67
CDK16-205ENST00000462483 SLF2Q8IX21 1173 aa10.86□□□□□ -0.67
CDK16-205ENST00000462483 MTFR1LQ9H019 292 aa10.86□□□□□ -0.67
CDK16-205ENST00000462483 CCDC87Q9NVE4 849 aa10.86□□□□□ -0.67
CDK16-205ENST00000462483 PPP1R1BQ9UD71 204 aaPredicted RBP10.86□□□□□ -0.67
CDK16-205ENST00000462483 TSPYL4Q9UJ04 414 aa10.86□□□□□ -0.67
CDK16-205ENST00000462483 ZBTB1Q9Y2K1 713 aa10.86□□□□□ -0.67
CDK16-205ENST00000462483 RTCBQ9Y3I0 505 aaKnown RBP10.86□□□□□ -0.67
CDK16-205ENST00000462483 COL15A1P39059 1388 aa10.86□□□□□ -0.67
CDK16-205ENST00000462483 COL11A2P13942 1736 aaPredicted RBP10.86□□□□□ -0.67
CDK16-205ENST00000462483 LAMB2P55268 1798 aa10.85□□□□□ -0.67
CDK16-205ENST00000462483 CANXP27824 592 aaKnown RBP10.85□□□□□ -0.67
CDK16-205ENST00000462483 PIP4K2AP48426 406 aaPredicted RBP10.85□□□□□ -0.67
CDK16-205ENST00000462483 TJAP1Q5JTD0 557 aa10.85□□□□□ -0.67
CDK16-205ENST00000462483 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
CDK16-205ENST00000462483 RBM46Q8TBY0 533 aaKnown RBP10.85□□□□□ -0.67
CDK16-205ENST00000462483 ZNF330Q9Y3S2 320 aaPredicted RBP10.85□□□□□ -0.67
CDK16-205ENST00000462483 SALL2Q9Y467 1007 aaPredicted RBP10.85□□□□□ -0.67
CDK16-205ENST00000462483 ADGRG1Q9Y653 693 aa10.85□□□□□ -0.67
CDK16-205ENST00000462483 SOS1Q07889 1333 aaPredicted RBP10.84□□□□□ -0.67
CDK16-205ENST00000462483 RPS6KA4O75676 772 aa10.84□□□□□ -0.67
CDK16-205ENST00000462483 RC3H1Q5TC82 1133 aaKnown RBP10.84□□□□□ -0.67
CDK16-205ENST00000462483 SRP68Q9UHB9 627 aaKnown RBP10.84□□□□□ -0.67
CDK16-205ENST00000462483 CCDC88AQ3V6T2 1871 aa10.84□□□□□ -0.67
CDK16-205ENST00000462483 A1BGP04217 495 aa10.83□□□□□ -0.68
CDK16-205ENST00000462483 DNAJB2P25686 324 aa10.83□□□□□ -0.68
CDK16-205ENST00000462483 HMGB2P26583 209 aaKnown RBP10.83□□□□□ -0.68
CDK16-205ENST00000462483 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
CDK16-205ENST00000462483 EIF4A1P60842 406 aaKnown RBP10.83□□□□□ -0.68
CDK16-205ENST00000462483 KRT24Q2M2I5 525 aa10.83□□□□□ -0.68
CDK16-205ENST00000462483 TRAPPC3LQ5T215 181 aa10.83□□□□□ -0.68
CDK16-205ENST00000462483 FLAD1Q8NFF5 587 aa10.83□□□□□ -0.68
CDK16-205ENST00000462483 ZNF516Q92618 1163 aa10.83□□□□□ -0.68
CDK16-205ENST00000462483 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
CDK16-205ENST00000462483 ARFGEF1Q9Y6D6 1849 aa10.83□□□□□ -0.68
CDK16-205ENST00000462483 RGS20O76081 388 aa10.82□□□□□ -0.68
CDK16-205ENST00000462483 STARD3NLO95772 234 aa10.82□□□□□ -0.68
CDK16-205ENST00000462483 SNRPA1P09661 255 aaKnown RBP10.82□□□□□ -0.68
CDK16-205ENST00000462483 RFC4P35249 363 aa10.82□□□□□ -0.68
CDK16-205ENST00000462483 COPS2P61201 443 aa10.82□□□□□ -0.68
CDK16-205ENST00000462483 SLC16A10Q8TF71 515 aa10.82□□□□□ -0.68
CDK16-205ENST00000462483 IL21Q9HBE4 155 aa10.82□□□□□ -0.68
CDK16-205ENST00000462483 RCCD1A6NED2 376 aa10.81□□□□□ -0.68
CDK16-205ENST00000462483 POLD1P28340 1107 aa10.81□□□□□ -0.68
CDK16-205ENST00000462483 SMYD5Q6GMV2 418 aa10.81□□□□□ -0.68
CDK16-205ENST00000462483 TNRC6CQ9HCJ0 1690 aaKnown RBP10.81□□□□□ -0.68
CDK16-205ENST00000462483 SPEF2Q9C093 1822 aa10.81□□□□□ -0.68
CDK16-205ENST00000462483 USP42Q9H9J4 1324 aaKnown RBP10.81□□□□□ -0.68
CDK16-205ENST00000462483 MYH3P11055 1940 aa10.8□□□□□ -0.68
CDK16-205ENST00000462483 CCER2I3L3R5 266 aa10.8□□□□□ -0.68
CDK16-205ENST00000462483 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
CDK16-205ENST00000462483 USPL1Q5W0Q7 1092 aa10.8□□□□□ -0.68
CDK16-205ENST00000462483 NECTIN2Q92692 538 aa10.8□□□□□ -0.68
CDK16-205ENST00000462483 ARXQ96QS3 562 aa10.8□□□□□ -0.68
CDK16-205ENST00000462483 TEX13AQ9BXU3 409 aaPredicted RBP10.8□□□□□ -0.68
CDK16-205ENST00000462483 MBIPQ9NS73 344 aa10.8□□□□□ -0.68
CDK16-205ENST00000462483 TAF1P21675 1872 aa10.79□□□□□ -0.68
CDK16-205ENST00000462483 DDX60Q8IY21 1712 aaKnown RBP10.79□□□□□ -0.68
CDK16-205ENST00000462483 CHL1O00533 1208 aa10.79□□□□□ -0.68
CDK16-205ENST00000462483 GYS1P13807 737 aa10.79□□□□□ -0.68
CDK16-205ENST00000462483 EIF5P55010 431 aaKnown RBP10.79□□□□□ -0.68
CDK16-205ENST00000462483 NBPF10Q6P3W6 841 aaKnown RBP10.79□□□□□ -0.68
CDK16-205ENST00000462483 WWC1Q8IX03 1113 aa10.79□□□□□ -0.68
CDK16-205ENST00000462483 NBPF15Q8N660 670 aa10.79□□□□□ -0.68
CDK16-205ENST00000462483 TSR2Q969E8 191 aaKnown RBP10.79□□□□□ -0.68
CDK16-205ENST00000462483 FHDC1Q9C0D6 1143 aaPredicted RBP10.79□□□□□ -0.68
CDK16-205ENST00000462483 ZPR1O75312 459 aa10.78□□□□□ -0.68
CDK16-205ENST00000462483 MMP10P09238 476 aa10.78□□□□□ -0.68
CDK16-205ENST00000462483 MYL6BP14649 208 aa10.78□□□□□ -0.68
CDK16-205ENST00000462483 EIF2S2P20042 333 aaKnown RBP10.78□□□□□ -0.68
CDK16-205ENST00000462483 FECHP22830 423 aa10.78□□□□□ -0.68
CDK16-205ENST00000462483 NGEFQ8N5V2 710 aa10.78□□□□□ -0.68
CDK16-205ENST00000462483 TMEM134Q9H6X4 195 aa10.78□□□□□ -0.68
CDK16-205ENST00000462483 IFT57Q9NWB7 429 aa10.78□□□□□ -0.68
CDK16-205ENST00000462483 TBC1D2BQ9UPU7 963 aa10.78□□□□□ -0.68
CDK16-205ENST00000462483 ANXA1P04083 346 aa10.77□□□□□ -0.69
CDK16-205ENST00000462483 ZNF853P0CG23 659 aa10.77□□□□□ -0.69
CDK16-205ENST00000462483 IL6STP40189 918 aaPredicted RBP10.77□□□□□ -0.69
CDK16-205ENST00000462483 GNAI1P63096 354 aa10.77□□□□□ -0.69
CDK16-205ENST00000462483 CALD1Q05682 793 aaKnown RBP10.77□□□□□ -0.69
CDK16-205ENST00000462483 HIC1Q14526 733 aa10.77□□□□□ -0.69
CDK16-205ENST00000462483 NKX2-3Q8TAU0 364 aa10.77□□□□□ -0.69
CDK16-205ENST00000462483 IRX2Q9BZI1 471 aaPredicted RBP10.77□□□□□ -0.69
CDK16-205ENST00000462483 BABAM1Q9NWV8 329 aa10.77□□□□□ -0.69
CDK16-205ENST00000462483 NARFQ9UHQ1 456 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms