RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 SETD1AO15047 1707 aaKnown RBP8.05□□□□□ -1.12
PTPN12-209ENST00000460731 METP08581 1390 aa8.05□□□□□ -1.12
PTPN12-209ENST00000460731 IQGAP1P46940 1657 aa8.05□□□□□ -1.12
PTPN12-209ENST00000460731 TECPR2O15040 1411 aa8.04□□□□□ -1.12
PTPN12-209ENST00000460731 KCNA6P17658 529 aa8.04□□□□□ -1.12
PTPN12-209ENST00000460731 NBPF1Q3BBV0 1214 aa8.04□□□□□ -1.12
PTPN12-209ENST00000460731 RNF20Q5VTR2 975 aa8.04□□□□□ -1.12
PTPN12-209ENST00000460731 EDARADDQ8WWZ3 215 aa8.04□□□□□ -1.12
PTPN12-209ENST00000460731 PSMG3-AS1Q96PY0 264 aa8.04□□□□□ -1.12
PTPN12-209ENST00000460731 SLC26A8Q96RN1 970 aa8.04□□□□□ -1.12
PTPN12-209ENST00000460731 HRH3Q9Y5N1 445 aa8.04□□□□□ -1.12
PTPN12-209ENST00000460731 PTPRUQ92729 1446 aa8.03□□□□□ -1.12
PTPN12-209ENST00000460731 LRPPRCP42704 1394 aaKnown RBP8.03□□□□□ -1.12
PTPN12-209ENST00000460731 ZEB1P37275 1124 aaPredicted RBP8.03□□□□□ -1.12
PTPN12-209ENST00000460731 KDM4CQ9H3R0 1056 aa8.03□□□□□ -1.12
PTPN12-209ENST00000460731 SUV39H2Q9H5I1 410 aa8.03□□□□□ -1.12
PTPN12-209ENST00000460731 ARHGEF10LQ9HCE6 1279 aa8.03□□□□□ -1.12
PTPN12-209ENST00000460731 LAMC1P11047 1609 aa8.03□□□□□ -1.12
PTPN12-209ENST00000460731 ASXL1Q8IXJ9 1541 aa8.03□□□□□ -1.12
PTPN12-209ENST00000460731 RALGAPBQ86X10 1494 aa8.02□□□□□ -1.13
PTPN12-209ENST00000460731 CHD2O14647 1828 aaKnown RBP8.02□□□□□ -1.13
PTPN12-209ENST00000460731 C2CD2LO14523 706 aa8.02□□□□□ -1.13
PTPN12-209ENST00000460731 ITGB7P26010 798 aa8.02□□□□□ -1.13
PTPN12-209ENST00000460731 LBRQ14739 615 aaKnown RBP8.02□□□□□ -1.13
PTPN12-209ENST00000460731 GOLGA6L1Q8N7Z2 621 aa8.02□□□□□ -1.13
PTPN12-209ENST00000460731 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
PTPN12-209ENST00000460731 PHF24Q9UPV7 400 aa8.02□□□□□ -1.13
PTPN12-209ENST00000460731 NCOA3Q9Y6Q9 1424 aa8.02□□□□□ -1.13
PTPN12-209ENST00000460731 TRPM1Q7Z4N2 1603 aa8.01□□□□□ -1.13
PTPN12-209ENST00000460731 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
PTPN12-209ENST00000460731 A0A1B0GTH6 734 aa8.01□□□□□ -1.13
PTPN12-209ENST00000460731 SLCO4C1Q6ZQN7 724 aa8.01□□□□□ -1.13
PTPN12-209ENST00000460731 ESYT1Q9BSJ8 1104 aa8.01□□□□□ -1.13
PTPN12-209ENST00000460731 GPBP1L1Q9HC44 474 aaPredicted RBP8.01□□□□□ -1.13
PTPN12-209ENST00000460731 NDFIP2Q9NV92 336 aa8.01□□□□□ -1.13
PTPN12-209ENST00000460731 AMOTL2Q9Y2J4 779 aa8.01□□□□□ -1.13
PTPN12-209ENST00000460731 FAM135BQ49AJ0 1406 aa8.01□□□□□ -1.13
PTPN12-209ENST00000460731 YTHDC2Q9H6S0 1430 aaKnown RBP8.01□□□□□ -1.13
PTPN12-209ENST00000460731 NWD1Q149M9 1564 aa8.01□□□□□ -1.13
PTPN12-209ENST00000460731 DLC1Q96QB1 1528 aa8□□□□□ -1.13
PTPN12-209ENST00000460731 GNRH1P01148 92 aa8□□□□□ -1.13
PTPN12-209ENST00000460731 IL2RAP01589 272 aa8□□□□□ -1.13
PTPN12-209ENST00000460731 MCCD1P59942 119 aaPredicted RBP8□□□□□ -1.13
PTPN12-209ENST00000460731 CENPCQ03188 943 aa8□□□□□ -1.13
PTPN12-209ENST00000460731 TMEM132EQ6IEE7 984 aa8□□□□□ -1.13
PTPN12-209ENST00000460731 PTCH1Q13635 1447 aa8□□□□□ -1.13
PTPN12-209ENST00000460731 XRN1Q8IZH2 1706 aaKnown RBP8□□□□□ -1.13
PTPN12-209ENST00000460731 LTBP4Q8N2S1 1624 aa8□□□□□ -1.13
PTPN12-209ENST00000460731 C1QTNF9BB2RNN3 333 aa7.99□□□□□ -1.13
PTPN12-209ENST00000460731 CD163Q86VB7 1156 aa7.99□□□□□ -1.13
PTPN12-209ENST00000460731 CNKSR1Q969H4 720 aa7.99□□□□□ -1.13
PTPN12-209ENST00000460731 RRAGCQ9HB90 399 aa7.99□□□□□ -1.13
PTPN12-209ENST00000460731 GPAMQ9HCL2 828 aa7.99□□□□□ -1.13
PTPN12-209ENST00000460731 ATXN7L1Q9ULK2 861 aaPredicted RBP7.99□□□□□ -1.13
PTPN12-209ENST00000460731 NKTRP30414 1462 aaKnown RBP7.99□□□□□ -1.13
PTPN12-209ENST00000460731 ROBO2Q9HCK4 1378 aa7.98□□□□□ -1.13
PTPN12-209ENST00000460731 STRCP1A6NGW2 1772 aa7.98□□□□□ -1.13
PTPN12-209ENST00000460731 GRIN2CQ14957 1233 aa7.98□□□□□ -1.13
PTPN12-209ENST00000460731 FHDC1Q9C0D6 1143 aaPredicted RBP7.98□□□□□ -1.13
PTPN12-209ENST00000460731 PCDHB11Q9Y5F2 797 aa7.98□□□□□ -1.13
PTPN12-209ENST00000460731 ZNF335Q9H4Z2 1342 aaPredicted RBP7.98□□□□□ -1.13
PTPN12-209ENST00000460731 ROCK2O75116 1388 aaKnown RBP7.97□□□□□ -1.13
PTPN12-209ENST00000460731 SBNO2Q9Y2G9 1366 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 GNB5O14775 395 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 TMEM259Q4ZIN3 620 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 XAGE2Q96GT9 111 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 BCANQ96GW7 911 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 BTBD6Q96KE9 485 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 CARD11Q9BXL7 1154 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 RAB6BQ9NRW1 208 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 KNDC1Q76NI1 1749 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 CPS1P31327 1500 aa7.97□□□□□ -1.13
PTPN12-209ENST00000460731 SLC24A1O60721 1099 aa7.96□□□□□ -1.14
PTPN12-209ENST00000460731 EPXP11678 715 aa7.96□□□□□ -1.14
PTPN12-209ENST00000460731 CHRNA4P43681 627 aa7.96□□□□□ -1.14
PTPN12-209ENST00000460731 PHKA2P46019 1235 aa7.96□□□□□ -1.14
PTPN12-209ENST00000460731 DGKGP49619 791 aa7.96□□□□□ -1.14
PTPN12-209ENST00000460731 NR1H3Q13133 447 aa7.96□□□□□ -1.14
PTPN12-209ENST00000460731 PUS7Q96PZ0 661 aaKnown RBP7.96□□□□□ -1.14
PTPN12-209ENST00000460731 TESK2Q96S53 571 aa7.96□□□□□ -1.14
PTPN12-209ENST00000460731 GGA1Q9UJY5 639 aa7.96□□□□□ -1.14
PTPN12-209ENST00000460731 LRRC7Q96NW7 1537 aa7.96□□□□□ -1.14
PTPN12-209ENST00000460731 PIK3R2O00459 728 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 BNIP3LO60238 219 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 GPR37L1O60883 481 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 BMP4P12644 408 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 MSX1P28360 303 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 CTBSQ01459 385 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 C4orf17Q53FE4 359 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 ZSCAN10Q96SZ4 725 aaPredicted RBP7.95□□□□□ -1.14
PTPN12-209ENST00000460731 C19orf44Q9H6X5 657 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 GOPCQ9HD26 462 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
PTPN12-209ENST00000460731 IQSEC2Q5JU85 1478 aa7.94□□□□□ -1.14
PTPN12-209ENST00000460731 FGFR3P22607 806 aa7.94□□□□□ -1.14
PTPN12-209ENST00000460731 WAPLQ7Z5K2 1190 aa7.94□□□□□ -1.14
PTPN12-209ENST00000460731 PROSER2Q86WR7 435 aaPredicted RBP7.94□□□□□ -1.14
PTPN12-209ENST00000460731 ABHD17AQ96GS6 310 aa7.94□□□□□ -1.14
PTPN12-209ENST00000460731 PRAM1Q96QH2 718 aa7.94□□□□□ -1.14
PTPN12-209ENST00000460731 CRISPLD1Q9H336 500 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms