RNA–Protein interactions for RNA: ENST00000460002.1

PCOLCE-202, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-202ENST00000460002 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
PCOLCE-202ENST00000460002 R3HDMLQ9H3Y0 253 aa18.37■□□□□ 0.53
PCOLCE-202ENST00000460002 BRCA2P51587 3418 aa18.37■□□□□ 0.53
PCOLCE-202ENST00000460002 SIPA1L3O60292 1781 aaPredicted RBP18.36■□□□□ 0.53
PCOLCE-202ENST00000460002 DPF2Q92785 391 aa18.36■□□□□ 0.53
PCOLCE-202ENST00000460002 CDCA5Q96FF9 252 aa18.36■□□□□ 0.53
PCOLCE-202ENST00000460002 RBBP6Q7Z6E9 1792 aaKnown RBP18.35■□□□□ 0.53
PCOLCE-202ENST00000460002 H0YGN5 161 aa18.34■□□□□ 0.53
PCOLCE-202ENST00000460002 RBM26Q5T8P6 1007 aaKnown RBP18.34■□□□□ 0.53
PCOLCE-202ENST00000460002 POLR2AP24928 1970 aaKnown RBP18.33■□□□□ 0.53
PCOLCE-202ENST00000460002 ASTN2O75129 1339 aaPredicted RBP18.33■□□□□ 0.53
PCOLCE-202ENST00000460002 TM4SF4P48230 202 aa18.33■□□□□ 0.52
PCOLCE-202ENST00000460002 DPP8Q6V1X1 898 aaPredicted RBP18.33■□□□□ 0.52
PCOLCE-202ENST00000460002 MORC1Q86VD1 984 aa18.33■□□□□ 0.52
PCOLCE-202ENST00000460002 SULF1Q8IWU6 871 aa18.33■□□□□ 0.52
PCOLCE-202ENST00000460002 TMX4Q9H1E5 349 aaPredicted RBP18.33■□□□□ 0.52
PCOLCE-202ENST00000460002 COL6A3P12111 3177 aa18.33■□□□□ 0.52
PCOLCE-202ENST00000460002 CENPFP49454 3210 aa18.32■□□□□ 0.52
PCOLCE-202ENST00000460002 MOB2Q70IA6 237 aa18.32■□□□□ 0.52
PCOLCE-202ENST00000460002 GGA3Q9NZ52 723 aa18.32■□□□□ 0.52
PCOLCE-202ENST00000460002 TRIM17Q9Y577 477 aa18.32■□□□□ 0.52
PCOLCE-202ENST00000460002 PSMD14O00487 310 aa18.31■□□□□ 0.52
PCOLCE-202ENST00000460002 MNX1P50219 401 aaPredicted RBP18.31■□□□□ 0.52
PCOLCE-202ENST00000460002 CHRDL2Q6WN34 429 aa18.31■□□□□ 0.52
PCOLCE-202ENST00000460002 OTOP1Q7RTM1 612 aa18.31■□□□□ 0.52
PCOLCE-202ENST00000460002 CFHR5Q9BXR6 569 aa18.31■□□□□ 0.52
PCOLCE-202ENST00000460002 KIAA0100Q14667 2235 aaKnown RBP18.3■□□□□ 0.52
PCOLCE-202ENST00000460002 UBN2Q6ZU65 1347 aa18.3■□□□□ 0.52
PCOLCE-202ENST00000460002 BTBD11A6QL63 1104 aa18.3■□□□□ 0.52
PCOLCE-202ENST00000460002 GNAT3A8MTJ3 354 aa18.3■□□□□ 0.52
PCOLCE-202ENST00000460002 MPNDQ8N594 471 aa18.3■□□□□ 0.52
PCOLCE-202ENST00000460002 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
PCOLCE-202ENST00000460002 ABCC4O15439 1325 aa18.29■□□□□ 0.52
PCOLCE-202ENST00000460002 FKBP1BP68106 108 aa18.29■□□□□ 0.52
PCOLCE-202ENST00000460002 KIF4BQ2VIQ3 1234 aa18.29■□□□□ 0.52
PCOLCE-202ENST00000460002 SUSD4Q5VX71 490 aa18.29■□□□□ 0.52
PCOLCE-202ENST00000460002 POLR3GLQ9BT43 218 aa18.29■□□□□ 0.52
PCOLCE-202ENST00000460002 CEMIPQ8WUJ3 1361 aa18.29■□□□□ 0.52
PCOLCE-202ENST00000460002 IBTKQ9P2D0 1353 aaPredicted RBP18.29■□□□□ 0.52
PCOLCE-202ENST00000460002 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
PCOLCE-202ENST00000460002 GPTP24298 496 aa18.28■□□□□ 0.52
PCOLCE-202ENST00000460002 ARMC5Q96C12 935 aa18.28■□□□□ 0.52
PCOLCE-202ENST00000460002 RANBP2P49792 3224 aaKnown RBP18.27■□□□□ 0.52
PCOLCE-202ENST00000460002 UBE2Q2LH0YL09 131 aa18.27■□□□□ 0.52
PCOLCE-202ENST00000460002 MKRN3Q13064 507 aaKnown RBP18.27■□□□□ 0.52
PCOLCE-202ENST00000460002 SP8Q8IXZ3 490 aa18.27■□□□□ 0.52
PCOLCE-202ENST00000460002 CEP290O15078 2479 aa18.27■□□□□ 0.51
PCOLCE-202ENST00000460002 PITPNM2Q9BZ72 1349 aa18.26■□□□□ 0.51
PCOLCE-202ENST00000460002 DUOX1Q9NRD9 1551 aa18.26■□□□□ 0.51
PCOLCE-202ENST00000460002 NTSR2O95665 410 aa18.26■□□□□ 0.51
PCOLCE-202ENST00000460002 PANK3Q9H999 370 aa18.26■□□□□ 0.51
PCOLCE-202ENST00000460002 RPS12P25398 132 aaKnown RBP18.25■□□□□ 0.51
PCOLCE-202ENST00000460002 DBNDD1Q9H9R9 158 aa18.25■□□□□ 0.51
PCOLCE-202ENST00000460002 KCNQ5Q9NR82 932 aa18.25■□□□□ 0.51
PCOLCE-202ENST00000460002 PTPN22Q9Y2R2 807 aa18.25■□□□□ 0.51
PCOLCE-202ENST00000460002 ERVV-1B6SEH8 477 aa18.24■□□□□ 0.51
PCOLCE-202ENST00000460002 ANGEL2Q5VTE6 544 aaKnown RBP18.24■□□□□ 0.51
PCOLCE-202ENST00000460002 NLRP3Q96P20 1036 aa18.24■□□□□ 0.51
PCOLCE-202ENST00000460002 RTL9Q8NET4 1388 aa18.24■□□□□ 0.51
PCOLCE-202ENST00000460002 BBOX1O75936 387 aa18.23■□□□□ 0.51
PCOLCE-202ENST00000460002 SREBF2Q12772 1141 aa18.23■□□□□ 0.51
PCOLCE-202ENST00000460002 NGEFQ8N5V2 710 aa18.23■□□□□ 0.51
PCOLCE-202ENST00000460002 GAS2L2Q8NHY3 880 aa18.23■□□□□ 0.51
PCOLCE-202ENST00000460002 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
PCOLCE-202ENST00000460002 TTLL7Q6ZT98 887 aa18.21■□□□□ 0.51
PCOLCE-202ENST00000460002 ZNF34Q8IZ26 560 aa18.21■□□□□ 0.51
PCOLCE-202ENST00000460002 TMEM106CQ9BVX2 250 aa18.21■□□□□ 0.51
PCOLCE-202ENST00000460002 SCAF8Q9UPN6 1271 aaKnown RBP18.21■□□□□ 0.51
PCOLCE-202ENST00000460002 NUP98P52948 1817 aa18.21■□□□□ 0.51
PCOLCE-202ENST00000460002 SCARF1Q14162 830 aa18.2■□□□□ 0.5
PCOLCE-202ENST00000460002 PRO3102Q9H379 93 aa18.2■□□□□ 0.5
PCOLCE-202ENST00000460002 ZNF609O15014 1411 aa18.19■□□□□ 0.5
PCOLCE-202ENST00000460002 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
PCOLCE-202ENST00000460002 SLC10A5Q5PT55 438 aa18.19■□□□□ 0.5
PCOLCE-202ENST00000460002 PRAMEF18Q5VWM3 479 aa18.19■□□□□ 0.5
PCOLCE-202ENST00000460002 ZNF333Q96JL9 665 aa18.19■□□□□ 0.5
PCOLCE-202ENST00000460002 ZBTB3Q9H5J0 574 aa18.19■□□□□ 0.5
PCOLCE-202ENST00000460002 RIMBP2O15034 1052 aa18.18■□□□□ 0.5
PCOLCE-202ENST00000460002 DIAPH1O60610 1272 aaKnown RBP18.18■□□□□ 0.5
PCOLCE-202ENST00000460002 CAP1Q01518 475 aa18.18■□□□□ 0.5
PCOLCE-202ENST00000460002 CD99L2Q8TCZ2 262 aa18.18■□□□□ 0.5
PCOLCE-202ENST00000460002 ECE2O60344 883 aa18.17■□□□□ 0.5
PCOLCE-202ENST00000460002 ALDH1A1P00352 501 aa18.17■□□□□ 0.5
PCOLCE-202ENST00000460002 COL25A1Q9BXS0 654 aaPredicted RBP18.17■□□□□ 0.5
PCOLCE-202ENST00000460002 SOX1O00570 391 aaPredicted RBP18.16■□□□□ 0.5
PCOLCE-202ENST00000460002 VIL1P09327 827 aaKnown RBP18.16■□□□□ 0.5
PCOLCE-202ENST00000460002 ZNF280AP59817 542 aaPredicted RBP18.16■□□□□ 0.5
PCOLCE-202ENST00000460002 TTLL12Q14166 644 aaPredicted RBP18.16■□□□□ 0.5
PCOLCE-202ENST00000460002 DOK7Q18PE1 504 aa18.16■□□□□ 0.5
PCOLCE-202ENST00000460002 KIF6Q6ZMV9 814 aa18.16■□□□□ 0.5
PCOLCE-202ENST00000460002 PPP1R42Q7Z4L9 355 aa18.16■□□□□ 0.5
PCOLCE-202ENST00000460002 ERO1AQ96HE7 468 aa18.16■□□□□ 0.5
PCOLCE-202ENST00000460002 PTPN12Q05209 780 aaKnown RBP18.15■□□□□ 0.5
PCOLCE-202ENST00000460002 GRAPQ13588 217 aa18.15■□□□□ 0.5
PCOLCE-202ENST00000460002 GRAPLQ8TC17 118 aaPredicted RBP18.15■□□□□ 0.5
PCOLCE-202ENST00000460002 EFCC1Q9HA90 598 aa18.15■□□□□ 0.5
PCOLCE-202ENST00000460002 SPRYD7Q5W111 196 aa18.14■□□□□ 0.49
PCOLCE-202ENST00000460002 IFNL1Q8IU54 200 aa18.14■□□□□ 0.49
PCOLCE-202ENST00000460002 LRCH3Q96II8 777 aa18.14■□□□□ 0.49
PCOLCE-202ENST00000460002 LRRC37AA6NMS7 1700 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms