RNA–Protein interactions for RNA: ENST00000450932.2

SLF1-202, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 1 (best)

Gene SLF1, Length 2,318 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-202ENST00000450932 CNTNAP3BQ96NU0 1288 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 CNTNAP3Q9BZ76 1288 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 USP21Q9UK80 565 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 PCDHB11Q9Y5F2 797 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 MST1RQ04912 1400 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 ATG7O95352 703 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 ITGA6P23229 1130 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 NOM1Q5C9Z4 860 aaKnown RBP6.45□□□□□ -1.38
SLF1-202ENST00000450932 CAPN12Q6ZSI9 719 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 LYSMD3Q7Z3D4 306 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 ZNF592Q92610 1267 aa6.45□□□□□ -1.38
SLF1-202ENST00000450932 CDCA7Q9BWT1 371 aaPredicted RBP6.45□□□□□ -1.38
SLF1-202ENST00000450932 BAG6P46379 1132 aa6.44□□□□□ -1.38
SLF1-202ENST00000450932 SERPINB4P48594 390 aa6.44□□□□□ -1.38
SLF1-202ENST00000450932 RBM25P49756 843 aaKnown RBP6.44□□□□□ -1.38
SLF1-202ENST00000450932 CC2D2BQ6DHV5 1058 aa6.44□□□□□ -1.38
SLF1-202ENST00000450932 VRTNQ9H8Y1 702 aa6.44□□□□□ -1.38
SLF1-202ENST00000450932 CEP126Q9P2H0 1117 aa6.44□□□□□ -1.38
SLF1-202ENST00000450932 NEXMIFQ5QGS0 1516 aa6.44□□□□□ -1.38
SLF1-202ENST00000450932 XRN1Q8IZH2 1706 aaKnown RBP6.44□□□□□ -1.38
SLF1-202ENST00000450932 RHOQP17081 205 aa6.44□□□□□ -1.38
SLF1-202ENST00000450932 SCTRP47872 440 aa6.44□□□□□ -1.38
SLF1-202ENST00000450932 MCCD1P59942 119 aaPredicted RBP6.44□□□□□ -1.38
SLF1-202ENST00000450932 COL25A1Q9BXS0 654 aaPredicted RBP6.44□□□□□ -1.38
SLF1-202ENST00000450932 MKRN1Q9UHC7 482 aaKnown RBP6.44□□□□□ -1.38
SLF1-202ENST00000450932 NOVA2Q9UNW9 492 aaKnown RBP6.44□□□□□ -1.38
SLF1-202ENST00000450932 ADGRB2O60241 1585 aa6.44□□□□□ -1.38
SLF1-202ENST00000450932 A0A1W2PRU2 124 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 BRD1O95696 1058 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 EIF4G2P78344 907 aaKnown RBP eCLIP6.43□□□□□ -1.38
SLF1-202ENST00000450932 CCDC85AQ96PX6 553 aaPredicted RBP6.43□□□□□ -1.38
SLF1-202ENST00000450932 MYOM2P54296 1465 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 SENP3-EIF4A1A0A087X0R7 540 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 ERVK-9P63128 1117 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 KRT76Q01546 638 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 SV2AQ7L0J3 742 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 PHTF2Q8N3S3 785 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 C8orf37Q96NL8 207 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 NLRP3Q96P20 1036 aa6.43□□□□□ -1.38
SLF1-202ENST00000450932 NWD2Q9ULI1 1742 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 ADGRL3Q9HAR2 1447 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 RANGAP1P46060 587 aaPredicted RBP6.42□□□□□ -1.38
SLF1-202ENST00000450932 PTK7Q13308 1070 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 SLC27A3Q5K4L6 730 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 NANOS1Q8WY41 292 aaKnown RBP6.42□□□□□ -1.38
SLF1-202ENST00000450932 RIMS2Q9UQ26 1411 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L15C9J2P7 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L10C9JJH3 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L13C9JLJ4 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L12C9JPN9 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L11C9JVI0 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L21D6R901 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L18D6R9N7 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L22D6RA61 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L17D6RBQ6 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L19D6RCP7 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L20D6RJB6 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 RNF144AP50876 292 aaPredicted RBP6.42□□□□□ -1.38
SLF1-202ENST00000450932 USP17L24Q0WX57 530 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 USTQ9Y2C2 406 aa6.42□□□□□ -1.38
SLF1-202ENST00000450932 ADAMTS13Q76LX8 1427 aa6.41□□□□□ -1.38
SLF1-202ENST00000450932 RASA1P20936 1047 aa6.41□□□□□ -1.38
SLF1-202ENST00000450932 RNFT1Q5M7Z0 435 aa6.41□□□□□ -1.38
SLF1-202ENST00000450932 CYP2U1Q7Z449 544 aa6.41□□□□□ -1.38
SLF1-202ENST00000450932 PLPP7Q8NBV4 271 aa6.41□□□□□ -1.38
SLF1-202ENST00000450932 ARHGEF10LQ9HCE6 1279 aa6.41□□□□□ -1.38
SLF1-202ENST00000450932 LRPPRCP42704 1394 aaKnown RBP6.41□□□□□ -1.38
SLF1-202ENST00000450932 TMEM131LA2VDJ0 1609 aa6.41□□□□□ -1.38
SLF1-202ENST00000450932 IQGAP3Q86VI3 1631 aa6.41□□□□□ -1.38
SLF1-202ENST00000450932 SLIT2O94813 1529 aa6.4□□□□□ -1.38
SLF1-202ENST00000450932 IDI1Q13907 227 aa6.4□□□□□ -1.38
SLF1-202ENST00000450932 RIPOR1Q6ZS17 1223 aa6.4□□□□□ -1.38
SLF1-202ENST00000450932 RNF135Q8IUD6 432 aa6.4□□□□□ -1.38
SLF1-202ENST00000450932 RAB6BQ9NRW1 208 aa6.4□□□□□ -1.38
SLF1-202ENST00000450932 MYOM3Q5VTT5 1437 aa6.4□□□□□ -1.39
SLF1-202ENST00000450932 DKK1O94907 266 aa6.39□□□□□ -1.39
SLF1-202ENST00000450932 POU4F2Q12837 409 aa6.39□□□□□ -1.39
SLF1-202ENST00000450932 DPYDQ12882 1025 aa6.39□□□□□ -1.39
SLF1-202ENST00000450932 MTMR3Q13615 1198 aa6.39□□□□□ -1.39
SLF1-202ENST00000450932 SLC26A8Q96RN1 970 aa6.39□□□□□ -1.39
SLF1-202ENST00000450932 OSBPL3Q9H4L5 887 aa6.39□□□□□ -1.39
SLF1-202ENST00000450932 MYCP01106 439 aaPredicted RBP6.39□□□□□ -1.39
SLF1-202ENST00000450932 OGFOD1Q8N543 542 aa6.39□□□□□ -1.39
SLF1-202ENST00000450932 GAS2L1Q99501 681 aaPredicted RBP6.39□□□□□ -1.39
SLF1-202ENST00000450932 ANO2Q9NQ90 1003 aa6.39□□□□□ -1.39
SLF1-202ENST00000450932 CUEDC1Q9NWM3 386 aaPredicted RBP6.39□□□□□ -1.39
SLF1-202ENST00000450932 GLI3P10071 1580 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 PRMT3O60678 531 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 SOX11P35716 441 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 CLN3Q13286 438 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 UNC5CLQ8IV45 518 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 UNCXA6NJT0 531 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 GPC1P35052 558 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 C1QTNF8P60827 252 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 OXLD1Q5BKU9 147 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 C1orf167Q5SNV9 1468 aa6.38□□□□□ -1.39
SLF1-202ENST00000450932 CROCC2H7BZ55 1655 aa6.37□□□□□ -1.39
SLF1-202ENST00000450932 VPS72Q15906 364 aa6.37□□□□□ -1.39
SLF1-202ENST00000450932 SLFNL1Q499Z3 407 aa6.37□□□□□ -1.39
SLF1-202ENST00000450932 SVOPQ8N4V2 548 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms