RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 KRT26Q7Z3Y9 468 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 DDX11Q96FC9 970 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 ZBTB1Q9Y2K1 713 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 IGSF1Q8N6C5 1336 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 DPP9Q86TI2 863 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 HTATIP2Q9BUP3 242 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 SSH2Q76I76 1423 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 RAD17O75943 681 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 PTMSP20962 102 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 EIF2AK4Q9P2K8 1649 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 GTPBP6O43824 516 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 ANP32AP39687 249 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 KSR2Q6VAB6 950 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 FTOQ9C0B1 505 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 SRP68Q9UHB9 627 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 PPEF1O14829 653 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 UQCRFS1P1P0C7P4 283 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 FAM89AQ96GI7 184 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 LRRC7Q96NW7 1537 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 BIRC2Q13490 618 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 LGR6Q9HBX8 967 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 ANGEL1Q9UNK9 670 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 SPATA31D1Q6ZQQ2 1576 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 GOLGA6L4A6NEF3 574 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 PDE8AO60658 829 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 SEC24BO95487 1268 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 ZNF444Q8N0Y2 327 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 ABCA6Q8N139 1617 aa6.72□□□□□ -1.33
CDC42BPA-209ENST00000448940 PLSCR1O15162 318 aa6.71□□□□□ -1.33
CDC42BPA-209ENST00000448940 SSTR3P32745 418 aaPredicted RBP6.71□□□□□ -1.33
CDC42BPA-209ENST00000448940 SLC9C1Q4G0N8 1177 aa6.71□□□□□ -1.33
CDC42BPA-209ENST00000448940 NARFQ9UHQ1 456 aa6.71□□□□□ -1.33
CDC42BPA-209ENST00000448940 KIF24Q5T7B8 1368 aa6.71□□□□□ -1.33
CDC42BPA-209ENST00000448940 PARD3Q8TEW0 1356 aa6.71□□□□□ -1.33
CDC42BPA-209ENST00000448940 OSBPP22059 807 aa6.71□□□□□ -1.33
CDC42BPA-209ENST00000448940 PLBD2Q8NHP8 589 aa6.71□□□□□ -1.33
CDC42BPA-209ENST00000448940 COG6Q9Y2V7 657 aa6.71□□□□□ -1.33
CDC42BPA-209ENST00000448940 LMNB1P20700 586 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 PPP2R3CQ969Q6 453 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 IQSEC3Q9UPP2 1182 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 ATP2B4P23634 1241 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 DHX37Q8IY37 1157 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 TBC1D22AQ8WUA7 517 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 AACSQ86V21 672 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 CKAP2LQ8IYA6 745 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 LINS1Q8NG48 757 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 JARID2Q92833 1246 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 CHAMP1Q96JM3 812 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 GPR101Q96P66 508 aaPredicted RBP6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 MBIPQ9NS73 344 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 ERBB4Q15303 1308 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 ADAMTS13Q76LX8 1427 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 ATP7BP35670 1465 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 KIAA2012Q0VF49 1180 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 ATP2B3Q16720 1220 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 PPP4R3BQ5MIZ7 849 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 DNAI2Q9GZS0 605 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 CD2APQ9Y5K6 639 aa6.71□□□□□ -1.34
CDC42BPA-209ENST00000448940 LDHBP07195 334 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 UQCRHP07919 91 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 C1QTNF8P60827 252 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 BABAM1Q9NWV8 329 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 TRIM29Q14134 588 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 CCDC191Q8NCU4 936 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 ARHGEF1Q92888 912 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 PLXNC1O60486 1568 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 NCBP1Q09161 790 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 CUL5Q93034 780 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 MST1RQ04912 1400 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 SH2D4AQ9H788 454 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 DOK7Q18PE1 504 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 CLEC4GQ6UXB4 293 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 TRMT1LQ7Z2T5 733 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 ALDH1L1O75891 902 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 HIBADHP31937 336 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 BRIP1Q9BX63 1249 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 FBXO3Q9UK99 471 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 AXIN2Q9Y2T1 843 aa6.7□□□□□ -1.34
CDC42BPA-209ENST00000448940 HIP1O00291 1037 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 ZEB2O60315 1214 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 SUPT16HQ9Y5B9 1047 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 M0QZ92 97 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 TGFB2P61812 414 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 IQSEC2Q5JU85 1478 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 BECN1Q14457 450 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 TESK2Q96S53 571 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 CRNKL1Q9BZJ0 848 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 EVI5O60447 810 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 HOXB7P09629 217 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 CCNA1P78396 465 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 ELMSAN1Q6PJG2 1045 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 HELBQ8NG08 1087 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 TRIM17Q9Y577 477 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 TET3O43151 1660 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 ZFYVE28Q9HCC9 887 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 RALGAPBQ86X10 1494 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 TTF1Q15361 905 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 TANGO6Q9C0B7 1094 aa6.69□□□□□ -1.34
CDC42BPA-209ENST00000448940 MINDY4BA8MYZ0 360 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms