RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 SOX18P35713 384 aa8.59□□□□□ -1.03
PTP4A1P3-201ENST00000433661 DBN1Q16643 649 aa8.59□□□□□ -1.03
PTP4A1P3-201ENST00000433661 GALNT12Q8IXK2 581 aa8.59□□□□□ -1.03
PTP4A1P3-201ENST00000433661 SRCIN1Q9C0H9 1055 aa8.59□□□□□ -1.03
PTP4A1P3-201ENST00000433661 TMEM63CQ9P1W3 806 aa8.59□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ATXN7L1Q9ULK2 861 aaPredicted RBP8.59□□□□□ -1.03
PTP4A1P3-201ENST00000433661 AK5Q9Y6K8 562 aa8.59□□□□□ -1.03
PTP4A1P3-201ENST00000433661 ITGA6P23229 1130 aa8.58□□□□□ -1.04
PTP4A1P3-201ENST00000433661 CCINQ13939 588 aa8.58□□□□□ -1.04
PTP4A1P3-201ENST00000433661 NANOS1Q8WY41 292 aaKnown RBP8.58□□□□□ -1.04
PTP4A1P3-201ENST00000433661 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
PTP4A1P3-201ENST00000433661 IRX2Q9BZI1 471 aaPredicted RBP8.58□□□□□ -1.04
PTP4A1P3-201ENST00000433661 METTL5Q9NRN9 209 aaKnown RBP8.58□□□□□ -1.04
PTP4A1P3-201ENST00000433661 FOXD3Q9UJU5 478 aaPredicted RBP8.58□□□□□ -1.04
PTP4A1P3-201ENST00000433661 SPG7Q9UQ90 795 aa8.58□□□□□ -1.04
PTP4A1P3-201ENST00000433661 USP20Q9Y2K6 914 aa8.58□□□□□ -1.04
PTP4A1P3-201ENST00000433661 SCAMP3O14828 347 aaKnown RBP8.57□□□□□ -1.04
PTP4A1P3-201ENST00000433661 BNIP3LO60238 219 aa8.57□□□□□ -1.04
PTP4A1P3-201ENST00000433661 PHACTR2O75167 634 aa8.57□□□□□ -1.04
PTP4A1P3-201ENST00000433661 MAPTP10636 758 aaKnown RBP8.57□□□□□ -1.04
PTP4A1P3-201ENST00000433661 OR13H1Q8NG92 308 aa8.57□□□□□ -1.04
PTP4A1P3-201ENST00000433661 CCDC74AQ96AQ1 378 aa8.57□□□□□ -1.04
PTP4A1P3-201ENST00000433661 BACH2Q9BYV9 841 aa8.57□□□□□ -1.04
PTP4A1P3-201ENST00000433661 CUEDC1Q9NWM3 386 aaPredicted RBP8.57□□□□□ -1.04
PTP4A1P3-201ENST00000433661 HCN2Q9UL51 889 aa8.57□□□□□ -1.04
PTP4A1P3-201ENST00000433661 SFSWAPQ12872 951 aaKnown RBP8.56□□□□□ -1.04
PTP4A1P3-201ENST00000433661 PSMD2Q13200 908 aa8.56□□□□□ -1.04
PTP4A1P3-201ENST00000433661 CRELD1Q96HD1 420 aa8.56□□□□□ -1.04
PTP4A1P3-201ENST00000433661 SETDB2Q96T68 719 aa8.56□□□□□ -1.04
PTP4A1P3-201ENST00000433661 MARK1Q9P0L2 795 aa8.56□□□□□ -1.04
PTP4A1P3-201ENST00000433661 SOBPA7XYQ1 873 aa8.55□□□□□ -1.04
PTP4A1P3-201ENST00000433661 KIF4AO95239 1232 aa8.55□□□□□ -1.04
PTP4A1P3-201ENST00000433661 RIPOR1Q6ZS17 1223 aa8.55□□□□□ -1.04
PTP4A1P3-201ENST00000433661 ANKRD24Q8TF21 1146 aa8.55□□□□□ -1.04
PTP4A1P3-201ENST00000433661 MRS2Q9HD23 443 aa8.55□□□□□ -1.04
PTP4A1P3-201ENST00000433661 CNTN3Q9P232 1028 aa8.55□□□□□ -1.04
PTP4A1P3-201ENST00000433661 PHF24Q9UPV7 400 aa8.55□□□□□ -1.04
PTP4A1P3-201ENST00000433661 KIAA0319Q5VV43 1072 aa8.54□□□□□ -1.04
PTP4A1P3-201ENST00000433661 C1orf127Q8N9H9 656 aa8.54□□□□□ -1.04
PTP4A1P3-201ENST00000433661 C8orf37Q96NL8 207 aa8.54□□□□□ -1.04
PTP4A1P3-201ENST00000433661 C12orf49Q9H741 205 aa8.54□□□□□ -1.04
PTP4A1P3-201ENST00000433661 GMPR2Q9P2T1 348 aaKnown RBP8.54□□□□□ -1.04
PTP4A1P3-201ENST00000433661 KHNYNO15037 678 aaKnown RBP8.53□□□□□ -1.04
PTP4A1P3-201ENST00000433661 TTC39BQ5VTQ0 682 aaPredicted RBP8.53□□□□□ -1.04
PTP4A1P3-201ENST00000433661 USPL1Q5W0Q7 1092 aa8.53□□□□□ -1.04
PTP4A1P3-201ENST00000433661 AVENQ9NQS1 362 aaPredicted RBP8.53□□□□□ -1.04
PTP4A1P3-201ENST00000433661 STRN4Q9NRL3 753 aa8.53□□□□□ -1.04
PTP4A1P3-201ENST00000433661 RNF19AQ9NV58 838 aa8.53□□□□□ -1.04
PTP4A1P3-201ENST00000433661 TLR7Q9NYK1 1049 aaKnown RBP8.53□□□□□ -1.04
PTP4A1P3-201ENST00000433661 SALL4Q9UJQ4 1053 aa8.53□□□□□ -1.04
PTP4A1P3-201ENST00000433661 DCDC2BA2VCK2 349 aa8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 EREGO14944 169 aa8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 EDN3P14138 238 aa8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 SPEM2Q0P670 501 aa8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 TSNAXIP1Q2TAA8 658 aa8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 PRPF40BQ6NWY9 871 aaKnown RBP8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 NPAS3Q8IXF0 933 aa8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 SUV39H2Q9H5I1 410 aa8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 ZFATQ9P243 1243 aa8.52□□□□□ -1.05
PTP4A1P3-201ENST00000433661 MMP20O60882 483 aa8.51□□□□□ -1.05
PTP4A1P3-201ENST00000433661 PPFIA3O75145 1194 aa8.51□□□□□ -1.05
PTP4A1P3-201ENST00000433661 CTSHP09668 335 aa8.51□□□□□ -1.05
PTP4A1P3-201ENST00000433661 EIF4BP23588 611 aaKnown RBP8.51□□□□□ -1.05
PTP4A1P3-201ENST00000433661 FAM8A1Q9UBU6 413 aa8.51□□□□□ -1.05
PTP4A1P3-201ENST00000433661 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.51□□□□□ -1.05
PTP4A1P3-201ENST00000433661 LCE2BO14633 110 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 SASH3O75995 380 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 FGFR3P22607 806 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 CES1P23141 567 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 ST13P50502 369 aaKnown RBP8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 NRLP54845 237 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 FANCCQ00597 558 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 METTL16Q86W50 562 aaKnown RBP8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 EPS8L3Q8TE67 593 aaKnown RBP8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 ABHD17AQ96GS6 310 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 FAM161BQ96MY7 647 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 OSBPL7Q9BZF2 842 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 NPHS2Q9NP85 383 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 VTI1BQ9UEU0 232 aa8.5□□□□□ -1.05
PTP4A1P3-201ENST00000433661 USP31Q70CQ4 1352 aa8.49□□□□□ -1.05
PTP4A1P3-201ENST00000433661 RARAP10276 462 aa8.49□□□□□ -1.05
PTP4A1P3-201ENST00000433661 TARSP26639 723 aaKnown RBP8.49□□□□□ -1.05
PTP4A1P3-201ENST00000433661 PTPN12Q05209 780 aaKnown RBP8.49□□□□□ -1.05
PTP4A1P3-201ENST00000433661 PEAR1Q5VY43 1037 aaPredicted RBP8.49□□□□□ -1.05
PTP4A1P3-201ENST00000433661 FOXR1Q6PIV2 292 aa8.49□□□□□ -1.05
PTP4A1P3-201ENST00000433661 TRPM4Q8TD43 1214 aa8.49□□□□□ -1.05
PTP4A1P3-201ENST00000433661 TRAK1Q9UPV9 953 aa8.49□□□□□ -1.05
PTP4A1P3-201ENST00000433661 PHF20L1A8MW92 1017 aa8.48□□□□□ -1.05
PTP4A1P3-201ENST00000433661 HDLBPQ00341 1268 aaKnown RBP8.48□□□□□ -1.05
PTP4A1P3-201ENST00000433661 PLAURQ03405 335 aa8.48□□□□□ -1.05
PTP4A1P3-201ENST00000433661 NEUROD1Q13562 356 aa8.48□□□□□ -1.05
PTP4A1P3-201ENST00000433661 PCSK7Q16549 785 aa8.48□□□□□ -1.05
PTP4A1P3-201ENST00000433661 GLIS3Q8NEA6 775 aa8.48□□□□□ -1.05
PTP4A1P3-201ENST00000433661 GTPBP3Q969Y2 492 aaKnown RBP8.48□□□□□ -1.05
PTP4A1P3-201ENST00000433661 TRERF1Q96PN7 1200 aa8.48□□□□□ -1.05
PTP4A1P3-201ENST00000433661 SLC30A3Q99726 388 aa8.48□□□□□ -1.05
PTP4A1P3-201ENST00000433661 PSAPP07602 524 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms