RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 KIAA1524Q8TCG1 905 aa9.24□□□□□ -0.93
CNKSR3-202ENST00000433165 PLEKHF1Q96S99 279 aa9.24□□□□□ -0.93
CNKSR3-202ENST00000433165 PARP3Q9Y6F1 533 aa9.24□□□□□ -0.93
CNKSR3-202ENST00000433165 TMPOP42166 694 aaKnown RBP9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 CHAF1AQ13111 956 aaPredicted RBP9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 NFE2L2Q16236 605 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 INTS3Q68E01 1043 aaKnown RBP9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 ZNF771Q7L3S4 317 aaPredicted RBP9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 SIRT2Q8IXJ6 389 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 IL17REQ8NFR9 667 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 ZNF428Q96B54 188 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 CHAMP1Q96JM3 812 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 BABAM1Q9NWV8 329 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 USP25Q9UHP3 1055 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 RGL2O15211 777 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 ADCY5O95622 1261 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 CYP19A1P11511 503 aaPredicted RBP9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 SOS1Q07889 1333 aaPredicted RBP9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 GPR162Q16538 588 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 TTC22Q5TAA0 569 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 DNAJC10Q8IXB1 793 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 C17orf53Q8N3J3 647 aaPredicted RBP9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 ARHGEF1Q92888 912 aaKnown RBP9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 SLC4A9Q96Q91 983 aa9.23□□□□□ -0.93
CNKSR3-202ENST00000433165 COL15A1P39059 1388 aa9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 USP42Q9H9J4 1324 aaKnown RBP9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 SLFN14P0C7P3 912 aa9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 TGFB2P61812 414 aa9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 TAF7Q15545 349 aaPredicted RBP9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 MSL1Q68DK7 614 aa9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 PHACTR3Q96KR7 559 aa9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 CTNNA3Q9UI47 895 aa9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 TPM3P06753 285 aa9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 ARHGAP45Q92619 1136 aa9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 DDX41Q9UJV9 622 aaKnown RBP9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 KIF13BQ9NQT8 1826 aa9.22□□□□□ -0.93
CNKSR3-202ENST00000433165 LAMB4A4D0S4 1761 aa9.21□□□□□ -0.93
CNKSR3-202ENST00000433165 IGSF3O75054 1194 aa9.21□□□□□ -0.93
CNKSR3-202ENST00000433165 SNRPA1P09661 255 aaKnown RBP9.21□□□□□ -0.93
CNKSR3-202ENST00000433165 IL6STP40189 918 aaPredicted RBP9.21□□□□□ -0.93
CNKSR3-202ENST00000433165 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.93
CNKSR3-202ENST00000433165 NCBP1Q09161 790 aaKnown RBP9.21□□□□□ -0.93
CNKSR3-202ENST00000433165 SLC39A6Q13433 755 aa9.21□□□□□ -0.93
CNKSR3-202ENST00000433165 CUL4AQ13619 759 aa9.21□□□□□ -0.93
CNKSR3-202ENST00000433165 NARFQ9UHQ1 456 aa9.21□□□□□ -0.93
CNKSR3-202ENST00000433165 TCHHQ07283 1943 aa9.21□□□□□ -0.94
CNKSR3-202ENST00000433165 CCDC66A2RUB6 948 aa9.21□□□□□ -0.94
CNKSR3-202ENST00000433165 MMP10P09238 476 aa9.21□□□□□ -0.94
CNKSR3-202ENST00000433165 GYS1P13807 737 aa9.21□□□□□ -0.94
CNKSR3-202ENST00000433165 YY1P25490 414 aa9.21□□□□□ -0.94
CNKSR3-202ENST00000433165 TAF7LQ5H9L4 462 aa9.21□□□□□ -0.94
CNKSR3-202ENST00000433165 INTS5Q6P9B9 1019 aaKnown RBP9.21□□□□□ -0.94
CNKSR3-202ENST00000433165 TMEM87AQ8NBN3 555 aa9.21□□□□□ -0.94
CNKSR3-202ENST00000433165 MORC2Q9Y6X9 1032 aaPredicted RBP9.21□□□□□ -0.94
CNKSR3-202ENST00000433165 C10orf71Q711Q0 1435 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 KDM4AO75164 1064 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 CDK11BP21127 795 aaKnown RBP9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 MCM2P49736 904 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 INTS4Q96HW7 963 aaKnown RBP9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 KCNF1Q9H3M0 494 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 CHD4Q14839 1912 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 DLG5Q8TDM6 1919 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 KDM3BQ7LBC6 1761 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 ABCC4O15439 1325 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 VGLL3A8MV65 326 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 ZBTB22O15209 634 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 CCDC183Q5T5S1 534 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 MPNDQ8N594 471 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 TMX3Q96JJ7 454 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 PYCARDQ9ULZ3 195 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 ZNF652Q9Y2D9 606 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 SCN7AQ01118 1682 aa9.2□□□□□ -0.94
CNKSR3-202ENST00000433165 MYH14Q7Z406 1995 aaKnown RBP9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 REC8O95072 547 aa9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 FAM193AP78312 1265 aa9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 CHMP4AQ9BY43 222 aa9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 C1orf115Q9H7X2 142 aa9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 GADD45BO75293 160 aaPredicted RBP9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 TERF2Q15554 542 aa9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 MCM10Q7L590 875 aa9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 DNAJC2Q99543 621 aaKnown RBP9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 DCTPP1Q9H773 170 aa9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 ZBTB1Q9Y2K1 713 aa9.19□□□□□ -0.94
CNKSR3-202ENST00000433165 TULP2O00295 520 aa9.18□□□□□ -0.94
CNKSR3-202ENST00000433165 EIF5P55010 431 aaKnown RBP9.18□□□□□ -0.94
CNKSR3-202ENST00000433165 CASC1Q6TDU7 716 aa9.18□□□□□ -0.94
CNKSR3-202ENST00000433165 SMTNL1A8MU46 457 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 HCLS1P14317 486 aaPredicted RBP9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 SDSP20132 328 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 MX1P20591 662 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 KCNJ4P48050 445 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 FOXD4L5Q5VV16 416 aaPredicted RBP9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 CREBRFQ8IUR6 639 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 MRPL50Q8N5N7 158 aaKnown RBP9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 FOXD4L4Q8WXT5 416 aaPredicted RBP9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 TIGD1Q96MW7 591 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 FUCA2Q9BTY2 467 aa9.17□□□□□ -0.94
CNKSR3-202ENST00000433165 FAM53CQ9NYF3 392 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms