RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 CNGB1Q14028 1251 aaPredicted RBP10.76□□□□□ -0.69
CSTF1-203ENST00000428552 SLC10A5Q5PT55 438 aa10.76□□□□□ -0.69
CSTF1-203ENST00000428552 GIGYF2Q6Y7W6 1299 aaKnown RBP10.76□□□□□ -0.69
CSTF1-203ENST00000428552 CDC37L1Q7L3B6 337 aa10.76□□□□□ -0.69
CSTF1-203ENST00000428552 USP48Q86UV5 1035 aa10.76□□□□□ -0.69
CSTF1-203ENST00000428552 RTF1Q92541 710 aaKnown RBP10.76□□□□□ -0.69
CSTF1-203ENST00000428552 COL4A1P02462 1669 aa10.76□□□□□ -0.69
CSTF1-203ENST00000428552 LRRC37AA6NMS7 1700 aa10.75□□□□□ -0.69
CSTF1-203ENST00000428552 MYL6BP14649 208 aa10.75□□□□□ -0.69
CSTF1-203ENST00000428552 EIF4A1P60842 406 aaKnown RBP10.75□□□□□ -0.69
CSTF1-203ENST00000428552 RNF186Q9NXI6 227 aa10.75□□□□□ -0.69
CSTF1-203ENST00000428552 SAGE1Q9NXZ1 904 aa10.75□□□□□ -0.69
CSTF1-203ENST00000428552 CNOT7Q9UIV1 285 aaKnown RBP10.75□□□□□ -0.69
CSTF1-203ENST00000428552 RRP7AQ9Y3A4 280 aaKnown RBP10.75□□□□□ -0.69
CSTF1-203ENST00000428552 ANKRD36CQ5JPF3 1778 aa10.75□□□□□ -0.69
CSTF1-203ENST00000428552 DLG5Q8TDM6 1919 aa10.74□□□□□ -0.69
CSTF1-203ENST00000428552 KIF23Q02241 960 aaPredicted RBP10.74□□□□□ -0.69
CSTF1-203ENST00000428552 PDIA6Q15084 440 aa10.74□□□□□ -0.69
CSTF1-203ENST00000428552 PRPF38BQ5VTL8 546 aaKnown RBP10.74□□□□□ -0.69
CSTF1-203ENST00000428552 RGMBQ6NW40 437 aa10.74□□□□□ -0.69
CSTF1-203ENST00000428552 KIF6Q6ZMV9 814 aa10.74□□□□□ -0.69
CSTF1-203ENST00000428552 SAMD7Q7Z3H4 446 aa10.74□□□□□ -0.69
CSTF1-203ENST00000428552 SP8Q8IXZ3 490 aa10.74□□□□□ -0.69
CSTF1-203ENST00000428552 MICALL2Q8IY33 904 aa10.74□□□□□ -0.69
CSTF1-203ENST00000428552 ZBTB12Q9Y330 459 aaPredicted RBP10.74□□□□□ -0.69
CSTF1-203ENST00000428552 TAF1P21675 1872 aa10.74□□□□□ -0.69
CSTF1-203ENST00000428552 ADM5C9JUS6 153 aa10.73□□□□□ -0.69
CSTF1-203ENST00000428552 U2AF1L5P0DN76 240 aaPredicted RBP10.73□□□□□ -0.69
CSTF1-203ENST00000428552 U2AF1Q01081 240 aaKnown RBP eCLIP10.73□□□□□ -0.69
CSTF1-203ENST00000428552 DPP8Q6V1X1 898 aaPredicted RBP10.73□□□□□ -0.69
CSTF1-203ENST00000428552 SUPT20HQ8NEM7 779 aa10.73□□□□□ -0.69
CSTF1-203ENST00000428552 NLRP3Q96P20 1036 aa10.73□□□□□ -0.69
CSTF1-203ENST00000428552 BCL2L13Q9BXK5 485 aa10.73□□□□□ -0.69
CSTF1-203ENST00000428552 PCGF6Q9BYE7 350 aa10.73□□□□□ -0.69
CSTF1-203ENST00000428552 TRPA1O75762 1119 aa10.72□□□□□ -0.69
CSTF1-203ENST00000428552 BBOX1O75936 387 aa10.72□□□□□ -0.69
CSTF1-203ENST00000428552 TNIP1Q15025 636 aa10.72□□□□□ -0.69
CSTF1-203ENST00000428552 PROSER3Q2NL68 480 aa10.72□□□□□ -0.69
CSTF1-203ENST00000428552 PARP10Q53GL7 1025 aa10.72□□□□□ -0.69
CSTF1-203ENST00000428552 PPP1R42Q7Z4L9 355 aa10.72□□□□□ -0.69
CSTF1-203ENST00000428552 MPNDQ8N594 471 aa10.72□□□□□ -0.69
CSTF1-203ENST00000428552 CSRNP1Q96S65 589 aa10.72□□□□□ -0.69
CSTF1-203ENST00000428552 THUMPD2Q9BTF0 503 aaKnown RBP10.72□□□□□ -0.69
CSTF1-203ENST00000428552 GBA2Q9HCG7 927 aaPredicted RBP10.72□□□□□ -0.69
CSTF1-203ENST00000428552 RTL9Q8NET4 1388 aa10.72□□□□□ -0.69
CSTF1-203ENST00000428552 PSMD14O00487 310 aa10.71□□□□□ -0.69
CSTF1-203ENST00000428552 ASTN2O75129 1339 aaPredicted RBP10.71□□□□□ -0.69
CSTF1-203ENST00000428552 SLC10A3P09131 477 aa10.71□□□□□ -0.69
CSTF1-203ENST00000428552 HCLS1P14317 486 aaPredicted RBP10.71□□□□□ -0.69
CSTF1-203ENST00000428552 POLR2AP24928 1970 aaKnown RBP10.71□□□□□ -0.69
CSTF1-203ENST00000428552 PPP2R1AP30153 589 aa10.71□□□□□ -0.69
CSTF1-203ENST00000428552 TBC1D10BQ4KMP7 808 aaPredicted RBP10.71□□□□□ -0.69
CSTF1-203ENST00000428552 KRT26Q7Z3Y9 468 aa10.71□□□□□ -0.69
CSTF1-203ENST00000428552 DPF2Q92785 391 aa10.71□□□□□ -0.69
CSTF1-203ENST00000428552 UTP14AQ9BVJ6 771 aaKnown RBP10.71□□□□□ -0.69
CSTF1-203ENST00000428552 KCNQ5Q9NR82 932 aa10.71□□□□□ -0.69
CSTF1-203ENST00000428552 DDX60Q8IY21 1712 aaKnown RBP10.7□□□□□ -0.7
CSTF1-203ENST00000428552 ERBB4Q15303 1308 aa10.7□□□□□ -0.7
CSTF1-203ENST00000428552 H7C1D1 291 aa10.7□□□□□ -0.7
CSTF1-203ENST00000428552 GRAPQ13588 217 aa10.7□□□□□ -0.7
CSTF1-203ENST00000428552 CTU1Q7Z7A3 348 aaKnown RBP10.7□□□□□ -0.7
CSTF1-203ENST00000428552 NLRP10Q86W26 655 aa10.7□□□□□ -0.7
CSTF1-203ENST00000428552 GRAPLQ8TC17 118 aaPredicted RBP10.7□□□□□ -0.7
CSTF1-203ENST00000428552 CCDC102AQ96A19 550 aa10.7□□□□□ -0.7
CSTF1-203ENST00000428552 CFAP53Q96M91 514 aa10.7□□□□□ -0.7
CSTF1-203ENST00000428552 PLEKHF1Q96S99 279 aa10.7□□□□□ -0.7
CSTF1-203ENST00000428552 HPS5Q9UPZ3 1129 aa10.7□□□□□ -0.7
CSTF1-203ENST00000428552 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
CSTF1-203ENST00000428552 SCN9AQ15858 1988 aa10.69□□□□□ -0.7
CSTF1-203ENST00000428552 AKAP11Q9UKA4 1901 aa10.69□□□□□ -0.7
CSTF1-203ENST00000428552 ANXA1P04083 346 aa10.69□□□□□ -0.7
CSTF1-203ENST00000428552 ZNF157P51786 506 aaPredicted RBP10.69□□□□□ -0.7
CSTF1-203ENST00000428552 PNISRQ8TF01 805 aaKnown RBP10.69□□□□□ -0.7
CSTF1-203ENST00000428552 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
CSTF1-203ENST00000428552 RASAL3Q86YV0 1011 aa10.68□□□□□ -0.7
CSTF1-203ENST00000428552 C2orf69Q8N8R5 385 aa10.68□□□□□ -0.7
CSTF1-203ENST00000428552 TMX4Q9H1E5 349 aaPredicted RBP10.68□□□□□ -0.7
CSTF1-203ENST00000428552 POLLQ9UGP5 575 aa10.68□□□□□ -0.7
CSTF1-203ENST00000428552 HTTP42858 3142 aa10.67□□□□□ -0.7
CSTF1-203ENST00000428552 DDX46Q7L014 1031 aaKnown RBP10.67□□□□□ -0.7
CSTF1-203ENST00000428552 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
CSTF1-203ENST00000428552 CDCA5Q96FF9 252 aa10.67□□□□□ -0.7
CSTF1-203ENST00000428552 GGA3Q9NZ52 723 aa10.67□□□□□ -0.7
CSTF1-203ENST00000428552 MKI67P46013 3256 aaKnown RBP10.66□□□□□ -0.7
CSTF1-203ENST00000428552 ECE2O60344 883 aa10.66□□□□□ -0.7
CSTF1-203ENST00000428552 RPS12P25398 132 aaKnown RBP10.66□□□□□ -0.7
CSTF1-203ENST00000428552 GPSM2P81274 684 aa10.66□□□□□ -0.7
CSTF1-203ENST00000428552 WASHC4Q2M389 1173 aa10.66□□□□□ -0.7
CSTF1-203ENST00000428552 RBM26Q5T8P6 1007 aaKnown RBP10.66□□□□□ -0.7
CSTF1-203ENST00000428552 ZNF428Q96B54 188 aa10.66□□□□□ -0.7
CSTF1-203ENST00000428552 DCPSQ96C86 337 aaKnown RBP10.66□□□□□ -0.7
CSTF1-203ENST00000428552 ZNF609O15014 1411 aa10.66□□□□□ -0.7
CSTF1-203ENST00000428552 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.7
CSTF1-203ENST00000428552 SH3TC1Q8TE82 1336 aa10.65□□□□□ -0.7
CSTF1-203ENST00000428552 RIMBP2O15034 1052 aa10.65□□□□□ -0.7
CSTF1-203ENST00000428552 VIL1P09327 827 aaKnown RBP10.65□□□□□ -0.7
CSTF1-203ENST00000428552 TCIRG1Q13488 830 aa10.65□□□□□ -0.7
CSTF1-203ENST00000428552 NFE2L2Q16236 605 aa10.65□□□□□ -0.7
CSTF1-203ENST00000428552 DOK7Q18PE1 504 aa10.65□□□□□ -0.7
CSTF1-203ENST00000428552 KIF4BQ2VIQ3 1234 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms