RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 SUCLG2Q96I99 432 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 DAXXQ9UER7 740 aaPredicted RBP8.75□□□□□ -1.01
CDC7-203ENST00000428239 NSFL1CQ9UNZ2 370 aaKnown RBP8.75□□□□□ -1.01
CDC7-203ENST00000428239 PDZRN3Q9UPQ7 1066 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 RNF123Q5XPI4 1314 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 SRGAP3O43295 1099 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 PRPF40BQ6NWY9 871 aaKnown RBP8.75□□□□□ -1.01
CDC7-203ENST00000428239 SGIP1Q9BQI5 828 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 BICC1Q9H694 974 aaKnown RBP8.75□□□□□ -1.01
CDC7-203ENST00000428239 SEC31BQ9NQW1 1179 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 ITGA6P23229 1130 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 MVPQ14764 893 aaKnown RBP8.75□□□□□ -1.01
CDC7-203ENST00000428239 LDHAL6AQ6ZMR3 332 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 C3orf67Q6ZVT6 689 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 USP44Q9H0E7 712 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 GREM2Q9H772 168 aa8.75□□□□□ -1.01
CDC7-203ENST00000428239 ZNF831Q5JPB2 1677 aa8.74□□□□□ -1.01
CDC7-203ENST00000428239 PPEF1O14829 653 aaPredicted RBP8.74□□□□□ -1.01
CDC7-203ENST00000428239 SRGNP10124 158 aa8.74□□□□□ -1.01
CDC7-203ENST00000428239 CRBNQ96SW2 442 aa8.74□□□□□ -1.01
CDC7-203ENST00000428239 H7C1W4 665 aa8.74□□□□□ -1.01
CDC7-203ENST00000428239 BRPF1P55201 1214 aaPredicted RBP8.74□□□□□ -1.01
CDC7-203ENST00000428239 RPS8P62241 208 aaKnown RBP8.74□□□□□ -1.01
CDC7-203ENST00000428239 INTS3Q68E01 1043 aaKnown RBP8.74□□□□□ -1.01
CDC7-203ENST00000428239 ABCC4O15439 1325 aa8.74□□□□□ -1.01
CDC7-203ENST00000428239 C4AP0C0L4 1744 aa8.74□□□□□ -1.01
CDC7-203ENST00000428239 PDE3AQ14432 1141 aa8.74□□□□□ -1.01
CDC7-203ENST00000428239 FBXW7Q969H0 707 aa8.74□□□□□ -1.01
CDC7-203ENST00000428239 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
CDC7-203ENST00000428239 TUBGCP6Q96RT7 1819 aa8.73□□□□□ -1.01
CDC7-203ENST00000428239 FRAT2O75474 233 aaPredicted RBP8.73□□□□□ -1.01
CDC7-203ENST00000428239 HMMRO75330 724 aa8.73□□□□□ -1.01
CDC7-203ENST00000428239 DPP8Q6V1X1 898 aaPredicted RBP8.73□□□□□ -1.01
CDC7-203ENST00000428239 TTLL11Q8NHH1 800 aa8.73□□□□□ -1.01
CDC7-203ENST00000428239 CELF1Q92879 486 aaKnown RBP8.73□□□□□ -1.01
CDC7-203ENST00000428239 G3BP1Q13283 466 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDC7-203ENST00000428239 GRAPQ13588 217 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 METTL24Q5JXM2 366 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 STYK1Q6J9G0 422 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 OLFM4Q6UX06 510 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 ERICH6Q7L0X2 663 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 HELBQ8NG08 1087 aaPredicted RBP8.72□□□□□ -1.01
CDC7-203ENST00000428239 KLHDC4Q8TBB5 520 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 GRAPLQ8TC17 118 aaPredicted RBP8.72□□□□□ -1.01
CDC7-203ENST00000428239 CDHR2Q9BYE9 1310 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 GRIN3BO60391 1043 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 CCDC93Q567U6 631 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 EPHA10Q5JZY3 1008 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 SLC10A5Q5PT55 438 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 GORABQ5T7V8 394 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 VPS37DQ86XT2 251 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 RIMBP2O15034 1052 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 SURF6O75683 361 aaKnown RBP8.72□□□□□ -1.01
CDC7-203ENST00000428239 BBOX1O75936 387 aa8.72□□□□□ -1.01
CDC7-203ENST00000428239 C10orf71Q711Q0 1435 aa8.71□□□□□ -1.01
CDC7-203ENST00000428239 SOGA3Q5TF21 947 aa8.71□□□□□ -1.01
CDC7-203ENST00000428239 MPNDQ8N594 471 aa8.71□□□□□ -1.01
CDC7-203ENST00000428239 UFL1O94874 794 aa8.71□□□□□ -1.02
CDC7-203ENST00000428239 SF3B3Q15393 1217 aaKnown RBP8.71□□□□□ -1.02
CDC7-203ENST00000428239 CRAMP1Q96RY5 1269 aa8.71□□□□□ -1.02
CDC7-203ENST00000428239 TAOK3Q9H2K8 898 aa8.71□□□□□ -1.02
CDC7-203ENST00000428239 PA2G4Q9UQ80 394 aaKnown RBP8.71□□□□□ -1.02
CDC7-203ENST00000428239 IBTKQ9P2D0 1353 aaPredicted RBP8.71□□□□□ -1.02
CDC7-203ENST00000428239 EXOC6Q8TAG9 804 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 ZNF526Q8TF50 670 aaPredicted RBP8.7□□□□□ -1.02
CDC7-203ENST00000428239 JDP2Q8WYK2 163 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 SCN7AQ01118 1682 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 NUP98P52948 1817 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 LARGE2Q8N3Y3 721 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 NEUROD6Q96NK8 337 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 ZC3H12CQ9C0D7 883 aaKnown RBP8.7□□□□□ -1.02
CDC7-203ENST00000428239 PPIP5K2O43314 1243 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 TAF5LO75529 589 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 RNF181Q9P0P0 153 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 CEP126Q9P2H0 1117 aa8.7□□□□□ -1.02
CDC7-203ENST00000428239 FOXO4P98177 505 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 RASSF7Q02833 373 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 RTKN2Q8IZC4 609 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 ZNF277Q9NRM2 450 aaPredicted RBP8.69□□□□□ -1.02
CDC7-203ENST00000428239 GGA1Q9UJY5 639 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 CASZ1Q86V15 1759 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 ZBTB7BO15156 539 aaPredicted RBP8.69□□□□□ -1.02
CDC7-203ENST00000428239 YBX3P16989 372 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDC7-203ENST00000428239 CRY2Q49AN0 593 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 PXDNLA1KZ92 1463 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 ARFGEF2Q9Y6D5 1785 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 GPR101Q96P66 508 aaPredicted RBP8.69□□□□□ -1.02
CDC7-203ENST00000428239 EXOC6BQ9Y2D4 811 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 ATP6V0A2Q9Y487 856 aa8.69□□□□□ -1.02
CDC7-203ENST00000428239 CC2D2BQ6DHV5 1058 aa8.68□□□□□ -1.02
CDC7-203ENST00000428239 TMC4Q7Z404 712 aa8.68□□□□□ -1.02
CDC7-203ENST00000428239 EYA3Q99504 573 aa8.68□□□□□ -1.02
CDC7-203ENST00000428239 HOXA10P31260 410 aaPredicted RBP8.68□□□□□ -1.02
CDC7-203ENST00000428239 SUPT20HQ8NEM7 779 aa8.68□□□□□ -1.02
CDC7-203ENST00000428239 PLA2G12BQ9BX93 195 aa8.68□□□□□ -1.02
CDC7-203ENST00000428239 PUS3Q9BZE2 481 aaKnown RBP8.68□□□□□ -1.02
CDC7-203ENST00000428239 ANKRD2Q9GZV1 360 aa8.68□□□□□ -1.02
CDC7-203ENST00000428239 CACNA1FO60840 1977 aa8.68□□□□□ -1.02
CDC7-203ENST00000428239 PNMA6EA0A0J9YXQ4 647 aa8.67□□□□□ -1.02
CDC7-203ENST00000428239 KCNA3P22001 575 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms