RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 DHX8Q14562 1220 aaKnown RBP16.17■□□□□ 0.18
RPL28-202ENST00000426763 ZNHIT6Q9NWK9 470 aaKnown RBP16.17■□□□□ 0.18
RPL28-202ENST00000426763 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 ZFYVE27Q5T4F4 411 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 KDM6BO15054 1643 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 G2E3Q7L622 706 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 INSRP06213 1382 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 TFCP2Q12800 502 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 WDR78Q5VTH9 848 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 HELBQ8NG08 1087 aaPredicted RBP16.16■□□□□ 0.18
RPL28-202ENST00000426763 JDP2Q8WYK2 163 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 ZBTB40Q9NUA8 1239 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
RPL28-202ENST00000426763 PRDM15P57071 1507 aaPredicted RBP16.16■□□□□ 0.18
RPL28-202ENST00000426763 METAP2P50579 478 aaKnown RBP eCLIP16.15■□□□□ 0.184e-6■■■■□ 26.2
RPL28-202ENST00000426763 GPS2Q13227 327 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 PAXIP1Q6ZW49 1069 aaPredicted RBP16.15■□□□□ 0.18
RPL28-202ENST00000426763 ROBO2Q9HCK4 1378 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 RLBP1P12271 317 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 ESR2Q92731 530 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 TMEM266Q2M3C6 531 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 SLC4A8Q2Y0W8 1093 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 ATP7BP35670 1465 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 A1BGP04217 495 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 PLCG2P16885 1265 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 MCM4P33991 863 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 GUCY1B3Q02153 619 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 MICU3Q86XE3 530 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 DNAJC10Q8IXB1 793 aa16.15■□□□□ 0.18
RPL28-202ENST00000426763 TSPY3P0CV98 308 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 TSPY8P0CW00 308 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 GNAT2P19087 354 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 MAGEB6P1A0A0J9YX57 407 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 WTAPQ15007 396 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 TET3O43151 1660 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 CBFA2T2O43439 604 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 PPFIBP1Q86W92 1011 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 TMTC2Q8N394 836 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 ESYT1Q9BSJ8 1104 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 PDE8AO60658 829 aa16.14■□□□□ 0.17
RPL28-202ENST00000426763 CCP110O43303 1012 aa16.13■□□□□ 0.17
RPL28-202ENST00000426763 STX8Q9UNK0 236 aa16.13■□□□□ 0.17
RPL28-202ENST00000426763 ADCY10Q96PN6 1610 aa16.13■□□□□ 0.17
RPL28-202ENST00000426763 MNS1Q8NEH6 495 aa16.13■□□□□ 0.17
RPL28-202ENST00000426763 ZNF496Q96IT1 587 aaPredicted RBP16.13■□□□□ 0.17
RPL28-202ENST00000426763 PHKG2P15735 406 aa16.13■□□□□ 0.17
RPL28-202ENST00000426763 RNF113AO15541 343 aaKnown RBP16.13■□□□□ 0.17
RPL28-202ENST00000426763 PDCL3Q9H2J4 239 aa16.13■□□□□ 0.17
RPL28-202ENST00000426763 ARHGAP31Q2M1Z3 1444 aa16.13■□□□□ 0.17
RPL28-202ENST00000426763 EIF4A1P60842 406 aaKnown RBP16.13■□□□□ 0.17
RPL28-202ENST00000426763 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
RPL28-202ENST00000426763 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
RPL28-202ENST00000426763 CCDC173Q0VFZ6 552 aa16.12■□□□□ 0.17
RPL28-202ENST00000426763 ORC3Q9UBD5 711 aaPredicted RBP16.12■□□□□ 0.17
RPL28-202ENST00000426763 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
RPL28-202ENST00000426763 AATKQ6ZMQ8 1374 aa16.12■□□□□ 0.17
RPL28-202ENST00000426763 ITGA6P23229 1130 aa16.12■□□□□ 0.17
RPL28-202ENST00000426763 EYA2O00167 538 aa16.12■□□□□ 0.17
RPL28-202ENST00000426763 PICALMQ13492 652 aa16.12■□□□□ 0.17
RPL28-202ENST00000426763 MAP3K11Q16584 847 aa16.12■□□□□ 0.17
RPL28-202ENST00000426763 ZMYM4Q5VZL5 1548 aa16.12■□□□□ 0.17
RPL28-202ENST00000426763 CDC42BPAQ5VT25 1732 aa16.12■□□□□ 0.17
RPL28-202ENST00000426763 SMTNL1A8MU46 457 aa16.11■□□□□ 0.17
RPL28-202ENST00000426763 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
RPL28-202ENST00000426763 BAG4O95429 457 aaKnown RBP16.11■□□□□ 0.17
RPL28-202ENST00000426763 C16orf71Q8IYS4 520 aaPredicted RBP16.11■□□□□ 0.17
RPL28-202ENST00000426763 LARP6Q9BRS8 491 aaKnown RBP16.11■□□□□ 0.17
RPL28-202ENST00000426763 LUC7LQ9NQ29 371 aaKnown RBP16.11■□□□□ 0.17
RPL28-202ENST00000426763 LDHBP07195 334 aaKnown RBP16.11■□□□□ 0.17
RPL28-202ENST00000426763 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
RPL28-202ENST00000426763 USP19O94966 1318 aa16.11■□□□□ 0.17
RPL28-202ENST00000426763 GJB2P29033 226 aa16.11■□□□□ 0.17
RPL28-202ENST00000426763 NMIQ13287 307 aaPredicted RBP16.11■□□□□ 0.17
RPL28-202ENST00000426763 APBA3O96018 575 aa16.11■□□□□ 0.17
RPL28-202ENST00000426763 HCLS1P14317 486 aaPredicted RBP16.11■□□□□ 0.17
RPL28-202ENST00000426763 DENND2AQ9ULE3 1009 aa16.11■□□□□ 0.17
RPL28-202ENST00000426763 TRAF1Q13077 416 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 IFIT1BQ5T764 474 aaKnown RBP16.1■□□□□ 0.17
RPL28-202ENST00000426763 KLF18A0A0U1RQI7 1052 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 ZBTB7BO15156 539 aaPredicted RBP16.1■□□□□ 0.17
RPL28-202ENST00000426763 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.1■□□□□ 0.17
RPL28-202ENST00000426763 SLC26A6Q9BXS9 759 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 ANAPC15P60006 121 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 PPP4R3AQ6IN85 833 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 TBC1D2Q9BYX2 928 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 KIAA0232Q92628 1395 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 TTLL5Q6EMB2 1281 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 BRF1Q92994 677 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 BAG6P46379 1132 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 MAGEB6Q8N7X4 407 aa16.1■□□□□ 0.17
RPL28-202ENST00000426763 USP6P35125 1406 aa16.09■□□□□ 0.17
RPL28-202ENST00000426763 ZBTB43O43298 467 aa16.09■□□□□ 0.17
RPL28-202ENST00000426763 TBC1D32Q96NH3 1257 aa16.09■□□□□ 0.17
RPL28-202ENST00000426763 RTL1A6NKG5 1358 aa16.09■□□□□ 0.17
RPL28-202ENST00000426763 GNAQP50148 359 aa16.09■□□□□ 0.17
RPL28-202ENST00000426763 CAGE1Q8TC20 777 aa16.09■□□□□ 0.17
RPL28-202ENST00000426763 PUM3Q15397 648 aaKnown RBP16.08■□□□□ 0.17
RPL28-202ENST00000426763 ARHGEF25Q86VW2 580 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms