RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 GPAMQ9HCL2 828 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
SSBP3-207ENST00000426150 FAM187AA6NFU0 413 aa9.47□□□□□ -0.89
SSBP3-207ENST00000426150 CTSHP09668 335 aa9.47□□□□□ -0.89
SSBP3-207ENST00000426150 ZNF76P36508 570 aa9.47□□□□□ -0.89
SSBP3-207ENST00000426150 TRIM46Q7Z4K8 759 aa9.47□□□□□ -0.89
SSBP3-207ENST00000426150 SREK1Q8WXA9 508 aaKnown RBP9.47□□□□□ -0.89
SSBP3-207ENST00000426150 TMEM63CQ9P1W3 806 aa9.47□□□□□ -0.89
SSBP3-207ENST00000426150 PHACTR2O75167 634 aa9.46□□□□□ -0.9
SSBP3-207ENST00000426150 EIF4BP23588 611 aaKnown RBP9.46□□□□□ -0.9
SSBP3-207ENST00000426150 IRS1P35568 1242 aa9.46□□□□□ -0.9
SSBP3-207ENST00000426150 PI16Q6UXB8 463 aa9.46□□□□□ -0.9
SSBP3-207ENST00000426150 EPS8L3Q8TE67 593 aaKnown RBP9.46□□□□□ -0.9
SSBP3-207ENST00000426150 RUBCNLQ9H714 662 aa9.46□□□□□ -0.9
SSBP3-207ENST00000426150 DYRK1BQ9Y463 629 aa9.46□□□□□ -0.9
SSBP3-207ENST00000426150 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.9
SSBP3-207ENST00000426150 XYLBO75191 536 aa9.45□□□□□ -0.9
SSBP3-207ENST00000426150 F11P03951 625 aa9.45□□□□□ -0.9
SSBP3-207ENST00000426150 GIPC1O14908 333 aa9.44□□□□□ -0.9
SSBP3-207ENST00000426150 EGFRP00533 1210 aa9.44□□□□□ -0.9
SSBP3-207ENST00000426150 SAMD5Q5TGI4 173 aa9.44□□□□□ -0.9
SSBP3-207ENST00000426150 NLRP8Q86W28 1048 aa9.44□□□□□ -0.9
SSBP3-207ENST00000426150 PGBD3Q8N328 593 aa9.44□□□□□ -0.9
SSBP3-207ENST00000426150 DRC1Q96MC2 740 aa9.44□□□□□ -0.9
SSBP3-207ENST00000426150 OSBPL7Q9BZF2 842 aa9.44□□□□□ -0.9
SSBP3-207ENST00000426150 C12orf49Q9H741 205 aa9.44□□□□□ -0.9
SSBP3-207ENST00000426150 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
SSBP3-207ENST00000426150 ZFP42Q96MM3 310 aa9.43□□□□□ -0.9
SSBP3-207ENST00000426150 TGIF2Q9GZN2 237 aa9.43□□□□□ -0.9
SSBP3-207ENST00000426150 CHRDQ9H2X0 955 aa9.43□□□□□ -0.9
SSBP3-207ENST00000426150 BRD7Q9NPI1 651 aa9.43□□□□□ -0.9
SSBP3-207ENST00000426150 C11orf16Q9NQ32 467 aa9.43□□□□□ -0.9
SSBP3-207ENST00000426150 DNMT3LQ9UJW3 386 aa9.43□□□□□ -0.9
SSBP3-207ENST00000426150 POLR3DP05423 398 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-207ENST00000426150 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-207ENST00000426150 CTC1Q2NKJ3 1217 aa9.42□□□□□ -0.9
SSBP3-207ENST00000426150 GAS2L1Q99501 681 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-207ENST00000426150 ZCCHC2Q9C0B9 1178 aaKnown RBP9.42□□□□□ -0.9
SSBP3-207ENST00000426150 NPHS2Q9NP85 383 aa9.42□□□□□ -0.9
SSBP3-207ENST00000426150 ABI2Q9NYB9 513 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-207ENST00000426150 CNTN3Q9P232 1028 aa9.42□□□□□ -0.9
SSBP3-207ENST00000426150 EREGO14944 169 aa9.41□□□□□ -0.9
SSBP3-207ENST00000426150 NLRP13Q86W25 1043 aa9.41□□□□□ -0.9
SSBP3-207ENST00000426150 GALNT12Q8IXK2 581 aa9.41□□□□□ -0.9
SSBP3-207ENST00000426150 C1orf127Q8N9H9 656 aa9.41□□□□□ -0.9
SSBP3-207ENST00000426150 PEG3Q9GZU2 1588 aa9.41□□□□□ -0.9
SSBP3-207ENST00000426150 FANCD2Q9BXW9 1451 aa9.4□□□□□ -0.9
SSBP3-207ENST00000426150 KCNQ4P56696 695 aa9.4□□□□□ -0.9
SSBP3-207ENST00000426150 SF3A1Q15459 793 aaKnown RBP9.4□□□□□ -0.9
SSBP3-207ENST00000426150 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.4□□□□□ -0.9
SSBP3-207ENST00000426150 EFHC2Q5JST6 749 aa9.4□□□□□ -0.9
SSBP3-207ENST00000426150 CCSER2Q9H7U1 834 aa9.4□□□□□ -0.9
SSBP3-207ENST00000426150 FAM8A1Q9UBU6 413 aa9.4□□□□□ -0.9
SSBP3-207ENST00000426150 SENP3-EIF4A1A0A087X0R7 540 aa9.39□□□□□ -0.91
SSBP3-207ENST00000426150 SRCIN1Q9C0H9 1055 aa9.39□□□□□ -0.91
SSBP3-207ENST00000426150 TTC39BQ5VTQ0 682 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-207ENST00000426150 NXPE4Q6UWF7 544 aa9.38□□□□□ -0.91
SSBP3-207ENST00000426150 PMEPA1Q969W9 287 aa9.38□□□□□ -0.91
SSBP3-207ENST00000426150 TINF2Q9BSI4 451 aa9.38□□□□□ -0.91
SSBP3-207ENST00000426150 BCO2Q9BYV7 579 aa9.38□□□□□ -0.91
SSBP3-207ENST00000426150 KCNH4Q9UQ05 1017 aa9.38□□□□□ -0.91
SSBP3-207ENST00000426150 USP31Q70CQ4 1352 aa9.37□□□□□ -0.91
SSBP3-207ENST00000426150 AXIN1O15169 862 aa9.37□□□□□ -0.91
SSBP3-207ENST00000426150 EFSO43281 561 aa9.37□□□□□ -0.91
SSBP3-207ENST00000426150 GADD45BO75293 160 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-207ENST00000426150 DGAT1O75907 488 aa9.37□□□□□ -0.91
SSBP3-207ENST00000426150 SASH3O75995 380 aa9.37□□□□□ -0.91
SSBP3-207ENST00000426150 USP17L7P0C7H9 530 aa9.37□□□□□ -0.91
SSBP3-207ENST00000426150 FAM157BP0CG42 384 aa9.37□□□□□ -0.91
SSBP3-207ENST00000426150 CES1P23141 567 aa9.37□□□□□ -0.91
SSBP3-207ENST00000426150 PTPN12Q05209 780 aaKnown RBP9.37□□□□□ -0.91
SSBP3-207ENST00000426150 LBRQ14739 615 aaKnown RBP9.37□□□□□ -0.91
SSBP3-207ENST00000426150 MEI1Q5TIA1 1274 aa9.37□□□□□ -0.91
SSBP3-207ENST00000426150 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-207ENST00000426150 NRG2O14511 850 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-207ENST00000426150 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-207ENST00000426150 MAN1A2O60476 641 aa9.36□□□□□ -0.91
SSBP3-207ENST00000426150 VEGFBP49765 207 aa9.36□□□□□ -0.91
SSBP3-207ENST00000426150 SFSWAPQ12872 951 aaKnown RBP9.36□□□□□ -0.91
SSBP3-207ENST00000426150 TAF1CQ15572 869 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-207ENST00000426150 PKDCCQ504Y2 493 aa9.36□□□□□ -0.91
SSBP3-207ENST00000426150 FIGNL1Q6PIW4 674 aa9.36□□□□□ -0.91
SSBP3-207ENST00000426150 CRIPAKQ8N1N5 446 aa9.36□□□□□ -0.91
SSBP3-207ENST00000426150 ACBD3Q9H3P7 528 aa9.36□□□□□ -0.91
SSBP3-207ENST00000426150 SUV39H2Q9H5I1 410 aa9.36□□□□□ -0.91
SSBP3-207ENST00000426150 PPP1R1BQ9UD71 204 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-207ENST00000426150 DDX41Q9UJV9 622 aaKnown RBP9.36□□□□□ -0.91
SSBP3-207ENST00000426150 ARAP1Q96P48 1450 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 GFRA3O60609 400 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 CYP2E1P05181 493 aaPredicted RBP9.35□□□□□ -0.91
SSBP3-207ENST00000426150 THBS1P07996 1170 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 CCINQ13939 588 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 GRM2Q14416 872 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 RIPOR1Q6ZS17 1223 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 HS2ST1Q7LGA3 356 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 MROH2BQ7Z745 1585 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 GSX2Q9BZM3 304 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 CAPN10Q9HC96 672 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 PCDHGC4Q9Y5F7 938 aa9.35□□□□□ -0.91
SSBP3-207ENST00000426150 TARSP26639 723 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms