RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 NBPF9Q3BBW0 867 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 OXLD1Q5BKU9 147 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 EFHC2Q5JST6 749 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 MNS1Q8NEH6 495 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 TRIM11Q96F44 468 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 CHIC2Q9UKJ5 165 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 ROCK2O75116 1388 aaKnown RBP6.38□□□□□ -1.39
SCG2-202ENST00000421386 NCOA1Q15788 1441 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 PRDM2Q13029 1718 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 SYNJ1O43426 1573 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 TONSLQ96HA7 1378 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 E9PSI1 815 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 APBB1O00213 710 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 CCDC172P0C7W6 258 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 ARAFP10398 606 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 CALRP27797 417 aaKnown RBP6.37□□□□□ -1.39
SCG2-202ENST00000421386 NASPP49321 788 aaPredicted RBP6.37□□□□□ -1.39
SCG2-202ENST00000421386 CBX1P83916 185 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 DOC2BQ14184 412 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 ESCO1Q5FWF5 840 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 CHSY3Q70JA7 882 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 ZNF592Q92610 1267 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 PSMD1Q99460 953 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 STRN4Q9NRL3 753 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 SMC4Q9NTJ3 1288 aa6.37□□□□□ -1.39
SCG2-202ENST00000421386 BAZ1AQ9NRL2 1556 aaPredicted RBP6.36□□□□□ -1.39
SCG2-202ENST00000421386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.36□□□□□ -1.39
SCG2-202ENST00000421386 KIF16BQ96L93 1317 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 MAPTP10636 758 aaKnown RBP6.36□□□□□ -1.39
SCG2-202ENST00000421386 GDF10P55107 478 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 TNP2Q05952 138 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 ATP2B3Q16720 1220 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 TBC1D9Q6ZT07 1266 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 ALYREFQ86V81 257 aaKnown RBP6.36□□□□□ -1.39
SCG2-202ENST00000421386 FAM9BQ8IZU0 186 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 NGEFQ8N5V2 710 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 CCDC39Q9UFE4 941 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 RCAN3Q9UKA8 241 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 PCDHGC4Q9Y5F7 938 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 CTTNBP2Q8WZ74 1663 aa6.36□□□□□ -1.39
SCG2-202ENST00000421386 UHRF1BP1LA0JNW5 1464 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 NLRP1Q9C000 1473 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 SOGA1O94964 1423 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 LRPPRCP42704 1394 aaKnown RBP6.35□□□□□ -1.39
SCG2-202ENST00000421386 USP19O94966 1318 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 ATXN7O15265 892 aaPredicted RBP6.35□□□□□ -1.39
SCG2-202ENST00000421386 INHAP05111 366 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 SLFN14P0C7P3 912 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 CAPN2P17655 700 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 SSR1P43307 286 aaKnown RBP6.35□□□□□ -1.39
SCG2-202ENST00000421386 MAP2K1Q02750 393 aaPredicted RBP6.35□□□□□ -1.39
SCG2-202ENST00000421386 VAC14Q08AM6 782 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 TMED8Q6PL24 325 aaPredicted RBP6.35□□□□□ -1.39
SCG2-202ENST00000421386 FAM43BQ6ZT52 329 aaPredicted RBP6.35□□□□□ -1.39
SCG2-202ENST00000421386 RPAINQ86UA6 219 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 ANKRD7Q92527 254 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 SLC26A8Q96RN1 970 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 GDPD2Q9HCC8 539 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 DONSONQ9NYP3 566 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 FEZ2Q9UHY8 353 aaPredicted RBP6.35□□□□□ -1.39
SCG2-202ENST00000421386 IQSEC3Q9UPP2 1182 aaPredicted RBP6.35□□□□□ -1.39
SCG2-202ENST00000421386 KDM5BQ9UGL1 1544 aa6.35□□□□□ -1.39
SCG2-202ENST00000421386 PLEKHH2Q8IVE3 1493 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 CCDC7Q96M83 1385 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 NPC1L1Q9UHC9 1359 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 MAPK8IP3Q9UPT6 1336 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 A0A1W2PNR3 127 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 TMEM229AB2RXF0 380 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 MAFGO15525 162 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 GUCY2CP25092 1073 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 NOP2P46087 812 aaKnown RBP6.34□□□□□ -1.39
SCG2-202ENST00000421386 PCBP4P57723 403 aaKnown RBP6.34□□□□□ -1.39
SCG2-202ENST00000421386 ZNF445P59923 1031 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 EIF4G2P78344 907 aaKnown RBP eCLIP6.34□□□□□ -1.39
SCG2-202ENST00000421386 USP4Q13107 963 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 ZKSCAN8Q15776 578 aaPredicted RBP6.34□□□□□ -1.39
SCG2-202ENST00000421386 FOXD4L6Q3SYB3 417 aaPredicted RBP6.34□□□□□ -1.39
SCG2-202ENST00000421386 CCDC184Q52MB2 194 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 ICE2Q659A1 982 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 FOXD4L3Q6VB84 417 aaPredicted RBP6.34□□□□□ -1.39
SCG2-202ENST00000421386 CLEC17AQ6ZS10 378 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 AEBP1Q8IUX7 1158 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 AIDAQ96BJ3 306 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 GBP4Q96PP9 640 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 SLKQ9H2G2 1235 aaPredicted RBP6.34□□□□□ -1.39
SCG2-202ENST00000421386 UPF2Q9HAU5 1272 aaKnown RBP6.34□□□□□ -1.39
SCG2-202ENST00000421386 SERTAD1Q9UHV2 236 aa6.34□□□□□ -1.39
SCG2-202ENST00000421386 NCOA3Q9Y6Q9 1424 aa6.33□□□□□ -1.4
SCG2-202ENST00000421386 KHNYNO15037 678 aaKnown RBP6.33□□□□□ -1.4
SCG2-202ENST00000421386 GTF2A1P52655 376 aaPredicted RBP6.33□□□□□ -1.4
SCG2-202ENST00000421386 TERF2Q15554 542 aa6.33□□□□□ -1.4
SCG2-202ENST00000421386 TMEM132AQ24JP5 1023 aa6.33□□□□□ -1.4
SCG2-202ENST00000421386 MED4Q9NPJ6 270 aa6.33□□□□□ -1.4
SCG2-202ENST00000421386 PARP3Q9Y6F1 533 aa6.33□□□□□ -1.4
SCG2-202ENST00000421386 MORC2Q9Y6X9 1032 aaPredicted RBP6.33□□□□□ -1.4
SCG2-202ENST00000421386 EIF3AQ14152 1382 aaKnown RBP6.32□□□□□ -1.4
SCG2-202ENST00000421386 TNNT3P45378 269 aaPredicted RBP6.32□□□□□ -1.4
SCG2-202ENST00000421386 SMTNP53814 917 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms