RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
SNCA-206ENST00000420646 NHSL1Q5SYE7 1610 aa10.61□□□□□ -0.71
SNCA-206ENST00000420646 CCDC171Q6TFL3 1326 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 PRPF40AO75400 957 aaKnown RBP10.6□□□□□ -0.71
SNCA-206ENST00000420646 ADORA1P30542 326 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 FAM182BQ5T319 152 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 KIF6Q6ZMV9 814 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 RUFY2Q8WXA3 655 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 GDPD2Q9HCC8 539 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 ERBB4Q15303 1308 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 A0A0G2JLW4 131 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 NECTIN1Q15223 517 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 MEX3CQ5U5Q3 659 aaKnown RBP10.6□□□□□ -0.71
SNCA-206ENST00000420646 CREB3L3Q68CJ9 461 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 PI16Q6UXB8 463 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 PTF1AQ7RTS3 328 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 GAS2L3Q86XJ1 694 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 NECAB1Q8N987 351 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 A0A1B0GUL7 405 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 ATP5JP18859 108 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 DDB1Q16531 1140 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 MARCH10Q8NA82 808 aaPredicted RBP10.6□□□□□ -0.71
SNCA-206ENST00000420646 TTC14Q96N46 770 aa10.6□□□□□ -0.71
SNCA-206ENST00000420646 SNAP23O00161 211 aa10.59□□□□□ -0.71
SNCA-206ENST00000420646 NUCB2P80303 420 aa10.59□□□□□ -0.71
SNCA-206ENST00000420646 FKBP4Q02790 459 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNCA-206ENST00000420646 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
SNCA-206ENST00000420646 HSP90AB3PQ58FF7 597 aa10.59□□□□□ -0.71
SNCA-206ENST00000420646 VPS53Q5VIR6 699 aa10.59□□□□□ -0.71
SNCA-206ENST00000420646 GREM2Q9H772 168 aa10.59□□□□□ -0.71
SNCA-206ENST00000420646 DDX49Q9Y6V7 483 aaKnown RBP10.59□□□□□ -0.71
SNCA-206ENST00000420646 EYA2O00167 538 aa10.59□□□□□ -0.71
SNCA-206ENST00000420646 MAP4K1Q92918 833 aa10.59□□□□□ -0.71
SNCA-206ENST00000420646 NSFL1CQ9UNZ2 370 aaKnown RBP10.59□□□□□ -0.71
SNCA-206ENST00000420646 BCL9O00512 1426 aa10.59□□□□□ -0.71
SNCA-206ENST00000420646 SLC27A2O14975 620 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 XRCC6P12956 609 aaKnown RBP eCLIP10.58□□□□□ -0.72
SNCA-206ENST00000420646 CUL4AQ13619 759 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 CCDC83Q8IWF9 413 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 CWC22Q9HCG8 908 aaKnown RBP10.58□□□□□ -0.72
SNCA-206ENST00000420646 SCARF1Q14162 830 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 FAM98CQ17RN3 349 aaKnown RBP10.58□□□□□ -0.72
SNCA-206ENST00000420646 TAF7LQ5H9L4 462 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
SNCA-206ENST00000420646 NLRP10Q86W26 655 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 HELBQ8NG08 1087 aaPredicted RBP10.58□□□□□ -0.72
SNCA-206ENST00000420646 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
SNCA-206ENST00000420646 TRMT112Q9UI30 125 aaKnown RBP10.58□□□□□ -0.72
SNCA-206ENST00000420646 MAP3K15Q6ZN16 1313 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 DISP2A7MBM2 1401 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 TAF5LO75529 589 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 HCLS1P14317 486 aaPredicted RBP10.58□□□□□ -0.72
SNCA-206ENST00000420646 ATP6V1AP38606 617 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
SNCA-206ENST00000420646 LRRC2Q9BYS8 371 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 PDRG1Q9NUG6 133 aa10.58□□□□□ -0.72
SNCA-206ENST00000420646 UBR2Q8IWV8 1755 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 SPATA31A1Q5TZJ5 1347 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 PPFIA3O75145 1194 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 GOLGA6L3A6NEY3 463 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 IL15P40933 162 aaPredicted RBP10.57□□□□□ -0.72
SNCA-206ENST00000420646 STK3Q13188 491 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 ZBTB38Q8NAP3 1195 aaPredicted RBP10.57□□□□□ -0.72
SNCA-206ENST00000420646 C8orf37Q96NL8 207 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 HAUS7Q99871 368 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 LMBRD1Q9NUN5 540 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 PLEKHG2Q9H7P9 1386 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 UBN2Q6ZU65 1347 aa10.57□□□□□ -0.72
SNCA-206ENST00000420646 ZNF609O15014 1411 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 ZKSCAN1P17029 563 aaPredicted RBP10.56□□□□□ -0.72
SNCA-206ENST00000420646 ITGA6P23229 1130 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 MCM2P49736 904 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 ITPK1Q13572 414 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 ME3Q16798 604 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 CAVIN1Q6NZI2 390 aaKnown RBP10.56□□□□□ -0.72
SNCA-206ENST00000420646 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 CEP126Q9P2H0 1117 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 TPCN1Q9ULQ1 816 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 LIMCH1Q9UPQ0 1083 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 LAMB4A4D0S4 1761 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 IRS4O14654 1257 aaPredicted RBP10.56□□□□□ -0.72
SNCA-206ENST00000420646 IFIT1P09914 478 aaKnown RBP10.56□□□□□ -0.72
SNCA-206ENST00000420646 ST3GAL1Q11201 340 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 IFIT5Q13325 482 aaKnown RBP10.56□□□□□ -0.72
SNCA-206ENST00000420646 GORABQ5T7V8 394 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 TEX13AQ9BXU3 409 aaPredicted RBP10.56□□□□□ -0.72
SNCA-206ENST00000420646 CYP46A1Q9Y6A2 500 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 LDHAL6AQ6ZMR3 332 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 TTLL11Q8NHH1 800 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 GPT2Q8TD30 523 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 XAGE2Q96GT9 111 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
SNCA-206ENST00000420646 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
SNCA-206ENST00000420646 GOLGA6L22H0YM25 854 aa10.55□□□□□ -0.72
SNCA-206ENST00000420646 BRD1O95696 1058 aa10.55□□□□□ -0.72
SNCA-206ENST00000420646 PCCAP05165 728 aaPredicted RBP10.55□□□□□ -0.72
SNCA-206ENST00000420646 MED23Q9ULK4 1368 aa10.55□□□□□ -0.72
SNCA-206ENST00000420646 CRKLP46109 303 aaKnown RBP10.55□□□□□ -0.72
SNCA-206ENST00000420646 INTS5Q6P9B9 1019 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms