RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 C5P01031 1676 aa8.67□□□□□ -1.02
LINC02539-202ENST00000419220 ERBB4Q15303 1308 aa8.67□□□□□ -1.02
LINC02539-202ENST00000419220 NUP188Q5SRE5 1749 aa8.67□□□□□ -1.02
LINC02539-202ENST00000419220 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
LINC02539-202ENST00000419220 NLGN1Q8N2Q7 840 aa8.67□□□□□ -1.02
LINC02539-202ENST00000419220 ZNF496Q96IT1 587 aaPredicted RBP8.67□□□□□ -1.02
LINC02539-202ENST00000419220 NPDC1Q9NQX5 325 aaPredicted RBP8.67□□□□□ -1.02
LINC02539-202ENST00000419220 ZNF652Q9Y2D9 606 aa8.67□□□□□ -1.02
LINC02539-202ENST00000419220 CHL1O00533 1208 aa8.66□□□□□ -1.02
LINC02539-202ENST00000419220 IL6STP40189 918 aaPredicted RBP8.66□□□□□ -1.02
LINC02539-202ENST00000419220 CRKLP46109 303 aaKnown RBP8.66□□□□□ -1.02
LINC02539-202ENST00000419220 PPP4CP60510 307 aa8.66□□□□□ -1.02
LINC02539-202ENST00000419220 TJAP1Q5JTD0 557 aa8.66□□□□□ -1.02
LINC02539-202ENST00000419220 WWC1Q8IX03 1113 aa8.66□□□□□ -1.02
LINC02539-202ENST00000419220 IL27Q8NEV9 243 aa8.66□□□□□ -1.02
LINC02539-202ENST00000419220 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
LINC02539-202ENST00000419220 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
LINC02539-202ENST00000419220 TAF1LQ8IZX4 1826 aa8.66□□□□□ -1.02
LINC02539-202ENST00000419220 SIPA1L3O60292 1781 aaPredicted RBP8.66□□□□□ -1.02
LINC02539-202ENST00000419220 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
LINC02539-202ENST00000419220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.65□□□□□ -1.02
LINC02539-202ENST00000419220 NPHP1O15259 732 aa8.65□□□□□ -1.02
LINC02539-202ENST00000419220 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
LINC02539-202ENST00000419220 CYP19A1P11511 503 aaPredicted RBP8.65□□□□□ -1.02
LINC02539-202ENST00000419220 CANXP27824 592 aaKnown RBP8.65□□□□□ -1.02
LINC02539-202ENST00000419220 EIF4A1P60842 406 aaKnown RBP8.65□□□□□ -1.02
LINC02539-202ENST00000419220 CCDC184Q52MB2 194 aa8.65□□□□□ -1.02
LINC02539-202ENST00000419220 KIF6Q6ZMV9 814 aa8.65□□□□□ -1.02
LINC02539-202ENST00000419220 DNAJC10Q8IXB1 793 aa8.65□□□□□ -1.02
LINC02539-202ENST00000419220 LINC00116Q8NCU8 138 aa8.65□□□□□ -1.02
LINC02539-202ENST00000419220 STK31Q9BXU1 1019 aa8.65□□□□□ -1.02
LINC02539-202ENST00000419220 MIS18AQ9NYP9 233 aa8.65□□□□□ -1.02
LINC02539-202ENST00000419220 ZNF330Q9Y3S2 320 aaPredicted RBP8.65□□□□□ -1.02
LINC02539-202ENST00000419220 SALL2Q9Y467 1007 aaPredicted RBP8.65□□□□□ -1.02
LINC02539-202ENST00000419220 QSER1Q2KHR3 1735 aa8.65□□□□□ -1.03
LINC02539-202ENST00000419220 TRIM6-TRIM34B2RNG4 842 aa8.64□□□□□ -1.03
LINC02539-202ENST00000419220 E9PSI1 815 aa8.64□□□□□ -1.03
LINC02539-202ENST00000419220 KCNQ4P56696 695 aa8.64□□□□□ -1.03
LINC02539-202ENST00000419220 ITPK1Q13572 414 aa8.64□□□□□ -1.03
LINC02539-202ENST00000419220 FAM161AQ3B820 660 aa8.64□□□□□ -1.03
LINC02539-202ENST00000419220 C6orf132Q5T0Z8 1188 aa8.64□□□□□ -1.03
LINC02539-202ENST00000419220 CCDC30Q5VVM6 783 aa8.64□□□□□ -1.03
LINC02539-202ENST00000419220 THUMPD2Q9BTF0 503 aaKnown RBP8.64□□□□□ -1.03
LINC02539-202ENST00000419220 PAPPAQ13219 1627 aa8.63□□□□□ -1.03
LINC02539-202ENST00000419220 DDX58O95786 925 aaKnown RBP8.63□□□□□ -1.03
LINC02539-202ENST00000419220 EIF2S2P20042 333 aaKnown RBP8.63□□□□□ -1.03
LINC02539-202ENST00000419220 GGCXP38435 758 aa8.63□□□□□ -1.03
LINC02539-202ENST00000419220 HDGFL1Q5TGJ6 251 aa8.63□□□□□ -1.03
LINC02539-202ENST00000419220 CLEC4GQ6UXB4 293 aa8.63□□□□□ -1.03
LINC02539-202ENST00000419220 ZNF428Q96B54 188 aa8.63□□□□□ -1.03
LINC02539-202ENST00000419220 HYPKQ9NX55 129 aa8.63□□□□□ -1.03
LINC02539-202ENST00000419220 DBF4Q9UBU7 674 aaPredicted RBP8.63□□□□□ -1.03
LINC02539-202ENST00000419220 PARP3Q9Y6F1 533 aa8.63□□□□□ -1.03
LINC02539-202ENST00000419220 UBR2Q8IWV8 1755 aa8.63□□□□□ -1.03
LINC02539-202ENST00000419220 CICQ96RK0 1608 aaPredicted RBP8.62□□□□□ -1.03
LINC02539-202ENST00000419220 PNPLA7Q6ZV29 1317 aa8.62□□□□□ -1.03
LINC02539-202ENST00000419220 ZNF853P0CG23 659 aa8.62□□□□□ -1.03
LINC02539-202ENST00000419220 HSP90B1P14625 803 aaKnown RBP8.62□□□□□ -1.03
LINC02539-202ENST00000419220 TTLL12Q14166 644 aaPredicted RBP8.62□□□□□ -1.03
LINC02539-202ENST00000419220 ZNF827Q17R98 1081 aa8.62□□□□□ -1.03
LINC02539-202ENST00000419220 HSP90AB3PQ58FF7 597 aa8.62□□□□□ -1.03
LINC02539-202ENST00000419220 COL23A1Q86Y22 540 aaPredicted RBP8.62□□□□□ -1.03
LINC02539-202ENST00000419220 MBIPQ9NS73 344 aa8.62□□□□□ -1.03
LINC02539-202ENST00000419220 NARFQ9UHQ1 456 aa8.62□□□□□ -1.03
LINC02539-202ENST00000419220 USP16Q9Y5T5 823 aa8.62□□□□□ -1.03
LINC02539-202ENST00000419220 COL15A1P39059 1388 aa8.61□□□□□ -1.03
LINC02539-202ENST00000419220 KDM3BQ7LBC6 1761 aa8.61□□□□□ -1.03
LINC02539-202ENST00000419220 KCPQ6ZWJ8 1503 aa8.61□□□□□ -1.03
LINC02539-202ENST00000419220 COL5A3P25940 1745 aaPredicted RBP8.61□□□□□ -1.03
LINC02539-202ENST00000419220 KCNQ3O43525 872 aa8.61□□□□□ -1.03
LINC02539-202ENST00000419220 ZBTB7AO95365 584 aa8.61□□□□□ -1.03
LINC02539-202ENST00000419220 CT47B1P0C2W7 299 aaPredicted RBP8.61□□□□□ -1.03
LINC02539-202ENST00000419220 GTF2E1P29083 439 aaPredicted RBP8.61□□□□□ -1.03
LINC02539-202ENST00000419220 EIF5P55010 431 aaKnown RBP8.61□□□□□ -1.03
LINC02539-202ENST00000419220 HNRNPUQ00839 825 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC02539-202ENST00000419220 DUSP27Q5VZP5 1158 aa8.61□□□□□ -1.03
LINC02539-202ENST00000419220 INTS5Q6P9B9 1019 aaKnown RBP8.61□□□□□ -1.03
LINC02539-202ENST00000419220 DZIP3Q86Y13 1208 aaKnown RBP8.61□□□□□ -1.03
LINC02539-202ENST00000419220 PARP9Q8IXQ6 854 aa8.61□□□□□ -1.03
LINC02539-202ENST00000419220 SLC4A9Q96Q91 983 aa8.61□□□□□ -1.03
LINC02539-202ENST00000419220 SETDB2Q96T68 719 aa8.61□□□□□ -1.03
LINC02539-202ENST00000419220 UBR3Q6ZT12 1888 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 ERVV-1B6SEH8 477 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 A1BGP04217 495 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 MYL6BP14649 208 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 TWISTNBQ3B726 338 aaPredicted RBP8.6□□□□□ -1.03
LINC02539-202ENST00000419220 PKDCCQ504Y2 493 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 PADI6Q6TGC4 694 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 MTRQ99707 1265 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 FAM117AQ9C073 453 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 NYXQ9GZU5 481 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 DDX21Q9NR30 783 aaKnown RBP eCLIP8.6□□□□□ -1.03
LINC02539-202ENST00000419220 ZBTB1Q9Y2K1 713 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 CACNA1FO60840 1977 aa8.6□□□□□ -1.03
LINC02539-202ENST00000419220 NEXNQ0ZGT2 675 aa8.59□□□□□ -1.03
LINC02539-202ENST00000419220 AMHR2Q16671 573 aa8.59□□□□□ -1.03
LINC02539-202ENST00000419220 USPL1Q5W0Q7 1092 aa8.59□□□□□ -1.03
LINC02539-202ENST00000419220 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
LINC02539-202ENST00000419220 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
LINC02539-202ENST00000419220 PPP1R42Q7Z4L9 355 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms