RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 STX6O43752 255 aa12.27□□□□□ -0.45
COL12A1-203ENST00000416123 GSTO1P78417 241 aa12.27□□□□□ -0.45
COL12A1-203ENST00000416123 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
COL12A1-203ENST00000416123 GOPCQ9HD26 462 aa12.27□□□□□ -0.45
COL12A1-203ENST00000416123 RTCBQ9Y3I0 505 aaKnown RBP12.27□□□□□ -0.45
COL12A1-203ENST00000416123 SBNO2Q9Y2G9 1366 aa12.27□□□□□ -0.45
COL12A1-203ENST00000416123 CCDC97Q96F63 343 aaPredicted RBP12.27□□□□□ -0.45
COL12A1-203ENST00000416123 MAGEB6Q8N7X4 407 aa12.26□□□□□ -0.45
COL12A1-203ENST00000416123 TDRD12Q587J7 1177 aaKnown RBP12.26□□□□□ -0.45
COL12A1-203ENST00000416123 CCDC148Q8NFR7 591 aa12.26□□□□□ -0.45
COL12A1-203ENST00000416123 TCP11L1Q9NUJ3 509 aa12.26□□□□□ -0.45
COL12A1-203ENST00000416123 PUF60Q9UHX1 559 aaKnown RBP12.26□□□□□ -0.45
COL12A1-203ENST00000416123 MCM5P33992 734 aa12.26□□□□□ -0.45
COL12A1-203ENST00000416123 KLF18A0A0U1RQI7 1052 aa12.26□□□□□ -0.45
COL12A1-203ENST00000416123 NAA16Q6N069 864 aaPredicted RBP12.26□□□□□ -0.45
COL12A1-203ENST00000416123 MTIF2P46199 727 aaKnown RBP12.26□□□□□ -0.45
COL12A1-203ENST00000416123 NUCB1Q02818 461 aa12.26□□□□□ -0.45
COL12A1-203ENST00000416123 CLIP2Q9UDT6 1046 aa12.26□□□□□ -0.45
COL12A1-203ENST00000416123 TNNQ9UQP3 1299 aa12.26□□□□□ -0.45
COL12A1-203ENST00000416123 PRAG1Q86YV5 1406 aa12.26□□□□□ -0.45
COL12A1-203ENST00000416123 HSP90AA4PQ58FG1 418 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 PLEKHH1Q9ULM0 1364 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 SLC9C2Q5TAH2 1124 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 BICD1Q96G01 975 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 CCDC113Q9H0I3 377 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 CWC15Q9P013 229 aaKnown RBP12.25□□□□□ -0.45
COL12A1-203ENST00000416123 UQCRFS1P1P0C7P4 283 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 ANAPC15P60006 121 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 IQCEQ6IPM2 695 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 OGFOD1Q8N543 542 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
COL12A1-203ENST00000416123 CCDC102AQ96A19 550 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 ADGBQ8N7X0 1667 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 Q6ZUG5 572 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 PLCD4Q9BRC7 762 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 WDR62O43379 1518 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 AFMP43652 599 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 CCDC191Q8NCU4 936 aa12.25□□□□□ -0.45
COL12A1-203ENST00000416123 CCDC12Q8WUD4 166 aaPredicted RBP12.25□□□□□ -0.45
COL12A1-203ENST00000416123 SFPQP23246 707 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL12A1-203ENST00000416123 TTC16Q8NEE8 873 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 VTI1AQ96AJ9 217 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 PARP3Q9Y6F1 533 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 TSPYL6Q8N831 410 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 BICC1Q9H694 974 aaKnown RBP12.24□□□□□ -0.45
COL12A1-203ENST00000416123 NSFL1CQ9UNZ2 370 aaKnown RBP12.24□□□□□ -0.45
COL12A1-203ENST00000416123 FGFR1OPO95684 399 aaKnown RBP12.24□□□□□ -0.45
COL12A1-203ENST00000416123 ZNF804AQ7Z570 1209 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 MYO5CQ9NQX4 1742 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 ZMYM3Q14202 1370 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 KSR2Q6VAB6 950 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 ZRSR2Q15696 482 aaKnown RBP12.24□□□□□ -0.45
COL12A1-203ENST00000416123 NYXQ9GZU5 481 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 PAG1Q9NWQ8 432 aa12.24□□□□□ -0.45
COL12A1-203ENST00000416123 MCMDC2Q4G0Z9 681 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 RBM8AQ9Y5S9 174 aaKnown RBP12.23□□□□□ -0.45
COL12A1-203ENST00000416123 IRS4O14654 1257 aaPredicted RBP12.23□□□□□ -0.45
COL12A1-203ENST00000416123 GCP02774 474 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 UBA7P41226 1012 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 MAPKBP1O60336 1514 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 ZBTB43O43298 467 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 CCDC40Q4G0X9 1142 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 FERMT2Q96AC1 680 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 IL16Q14005 1332 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 GNPATO15228 680 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 PDIA4P13667 645 aaKnown RBP12.23□□□□□ -0.45
COL12A1-203ENST00000416123 BRF1Q92994 677 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 DRC1Q96MC2 740 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 KCNA6P17658 529 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 TFCP2Q12800 502 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 TMC6Q7Z403 805 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 USP25Q9UHP3 1055 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 HDAC9Q9UKV0 1011 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 ALG1Q9BT22 464 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 CALM1P0DP23 149 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 CALM2P0DP24 149 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 CALM3P0DP25 149 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 RTN1Q16799 776 aa12.23□□□□□ -0.45
COL12A1-203ENST00000416123 BCCIPQ9P287 314 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL12A1-203ENST00000416123 BMP2KLQ5H9B9 411 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 ZGPATQ8N5A5 531 aaKnown RBP12.22□□□□□ -0.45
COL12A1-203ENST00000416123 SAP30BPQ9UHR5 308 aaKnown RBP12.22□□□□□ -0.45
COL12A1-203ENST00000416123 ERLIN1O75477 346 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 RXRAP19793 462 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 PTPN14Q15678 1187 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 KRT23Q9C075 422 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 PRC1O43663 620 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 KIF5CO60282 957 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 NMIQ13287 307 aaPredicted RBP12.22□□□□□ -0.45
COL12A1-203ENST00000416123 KIF1BO60333 1816 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 A0A1W2PP64 1363 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
COL12A1-203ENST00000416123 EYA1Q99502 592 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 DNAI2Q9GZS0 605 aa12.22□□□□□ -0.45
COL12A1-203ENST00000416123 AMPD3Q01432 767 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms