RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 MEIS3Q99687 375 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 TUBB2BQ9BVA1 445 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 FUT8Q9BYC5 575 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 LSG1Q9H089 658 aaKnown RBP3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ACBD3Q9H3P7 528 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ZSCAN16Q9H4T2 348 aaPredicted RBP3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ZSWIM6Q9HCJ5 1215 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ARFGAP3Q9NP61 516 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 PDRG1Q9NUG6 133 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 TRMT1Q9NXH9 659 aaKnown RBP3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 LCMT1Q9UIC8 334 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ADAM21Q9UKJ8 722 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 CFAP45Q9UL16 551 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 CYP46A1Q9Y6A2 500 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 RGPD1P0DJD0 1748 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 KIDINS220Q9ULH0 1771 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 LAMA4Q16363 1823 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 TSPOAP1O95153 1857 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 DLC1Q96QB1 1528 aa3.6□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 CEP170BQ9Y4F5 1589 aaPredicted RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 LRRC37A3O60309 1634 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 FMN2Q9NZ56 1722 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 MYO5BQ9ULV0 1848 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 VPS37CA5D8V6 355 aaPredicted RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 EIF3CLB5ME19 914 aaKnown RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 SRGAP3O43295 1099 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ZSCAN12O43309 604 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ERLIN1O75477 346 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 SASH3O75995 380 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 SFPQP23246 707 aaKnown RBP eCLIP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 CALRP27797 417 aaKnown RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 PSMA5P28066 241 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ATP6V1AP38606 617 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 USP5P45974 858 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 LMAN1P49257 510 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 GYS2P54840 703 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 EIF5P55010 431 aaKnown RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 EVCP57679 992 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 MAP3K9P80192 1104 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 SATB1Q01826 763 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 SF3B2Q13435 895 aaKnown RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 TRIM65Q6PJ69 517 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 HDXQ7Z353 690 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 NBPF11Q86T75 865 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 ERC1Q8IUD2 1116 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 CCDC83Q8IWF9 413 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 DHX40Q8IX18 779 aaKnown RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 CKAP2LQ8IYA6 745 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 BANK1Q8NDB2 785 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 FAM71BQ8TC56 605 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 BICD2Q8TD16 824 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 STAG1Q8WVM7 1258 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 EIF3CQ99613 913 aaKnown RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 CARD10Q9BWT7 1032 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 GBP3Q9H0R5 595 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 GGNBP2Q9H3C7 697 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 CXorf56Q9H5V9 222 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 A1CFQ9NQ94 594 aaKnown RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 EXOC6BQ9Y2D4 811 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 SOS1Q07889 1333 aaPredicted RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 USP42Q9H9J4 1324 aaKnown RBP3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 MAP3K5Q99683 1374 aa3.59□□□□□ -1.83
RNU6ATAC40P-201ENST00000408580 PTPRMP28827 1452 aa3.59□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ABCC6O95255 1503 aa3.59□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ERCC6L2Q5T890 1561 aa3.59□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SPATA31D1Q6ZQQ2 1576 aa3.59□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SIGLEC1Q9BZZ2 1709 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 TMCO5BA8MYB1 307 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 APBB1O00213 710 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 HIP1O00291 1037 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ELL2O00472 640 aaPredicted RBP3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CHL1O00533 1208 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 KIF3CO14782 793 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 NPHP1O15259 732 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CBFA2T2O43439 604 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 C21orf2O43822 256 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PPFIA4O75335 1185 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 NR1I2O75469 434 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 URI1O94763 535 aaPredicted RBP3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SEC31AO94979 1220 aaKnown RBP3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 LARGE1O95461 756 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 IL13P35225 146 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 TXLNAP40222 546 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PPP2R3AQ06190 1150 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 APOBRQ0VD83 1088 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ST3GAL1Q11201 340 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ARID5BQ14865 1188 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ME3Q16798 604 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 LONRF2Q1L5Z9 754 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 TSGA10IPQ3SY00 556 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 HSP90AB4PQ58FF6 505 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 DNAJC21Q5F1R6 531 aaKnown RBP3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ARMCX5Q6P1M9 558 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CCDC73Q6ZRK6 1079 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 C11orf57Q6ZUT1 292 aaPredicted RBP3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CDC37L1Q7L3B6 337 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 TADA2BQ86TJ2 420 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 HOMER1Q86YM7 354 aa3.58□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CCAR1Q8IX12 1150 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms