RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 GBP3Q9H0R5 595 aa15.35■□□□□ 0.05
CACNA1C-222ENST00000406454 CCDC102AQ96A19 550 aa15.35■□□□□ 0.05
CACNA1C-222ENST00000406454 CENPHQ9H3R5 247 aa15.35■□□□□ 0.05
CACNA1C-222ENST00000406454 YEATS4O95619 227 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 CYP7A1P22680 504 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 GSTO1P78417 241 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 KIF4BQ2VIQ3 1234 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 CALML4Q96GE6 196 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 KANK3Q6NY19 840 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 TMCO3Q6UWJ1 677 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 NUP88Q99567 741 aaPredicted RBP15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 EHMT1Q9H9B1 1298 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 ZBTB43O43298 467 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 TRPM2O94759 1503 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 TMC6Q7Z403 805 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 NFATC2IPQ8NCF5 419 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 AMPD3Q01432 767 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 CWF19L2Q2TBE0 894 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 SLC4A4Q9Y6R1 1079 aa15.34■□□□□ 0.05
CACNA1C-222ENST00000406454 GCP02774 474 aa15.33■□□□□ 0.05
CACNA1C-222ENST00000406454 IL2RBP14784 551 aa15.33■□□□□ 0.05
CACNA1C-222ENST00000406454 CASQ1P31415 396 aa15.33■□□□□ 0.05
CACNA1C-222ENST00000406454 CNNM2Q9H8M5 875 aa15.33■□□□□ 0.05
CACNA1C-222ENST00000406454 VAT1LQ9HCJ6 419 aa15.33■□□□□ 0.05
CACNA1C-222ENST00000406454 MAP3K19Q56UN5 1328 aa15.33■□□□□ 0.05
CACNA1C-222ENST00000406454 NCKAP5LQ9HCH0 1330 aa15.33■□□□□ 0.05
CACNA1C-222ENST00000406454 POTEJP0CG39 1038 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 RBM25P49756 843 aaKnown RBP15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 LRSAM1Q6UWE0 723 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 VPS36Q86VN1 386 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 CABLES1Q8TDN4 633 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 HLA-DOAP06340 250 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 TNNT1P13805 278 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 UBA7P41226 1012 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 UHRF1BP1Q6BDS2 1440 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 CTTNBP2Q8WZ74 1663 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 Q6ZUG5 572 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 TMTC2Q8N394 836 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 C19orf44Q9H6X5 657 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 PAG1Q9NWQ8 432 aa15.33■□□□□ 0.04
CACNA1C-222ENST00000406454 SLC9C2Q5TAH2 1124 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 DCAF5Q96JK2 942 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 CNPY2Q9Y2B0 182 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 CFAP43Q8NDM7 1665 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 SEPT7Q16181 437 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 ESR2Q92731 530 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 IDEP14735 1019 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 SMARCC1Q92922 1105 aaPredicted RBP15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 DESP17661 470 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 MTIF2P46199 727 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 ACSBG1Q96GR2 724 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 ALG1Q9BT22 464 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 TRMT1Q9NXH9 659 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 KCNA6P17658 529 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 GIMAP6Q6P9H5 292 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 NPC1L1Q9UHC9 1359 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 HCLS1P14317 486 aaPredicted RBP15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 ST5P78524 1137 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 IP6K1Q92551 441 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 CABP5Q9NP86 173 aa15.32■□□□□ 0.04
CACNA1C-222ENST00000406454 RNMTO43148 476 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 SLC4A8Q2Y0W8 1093 aa15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 PLEKHM2Q8IWE5 1019 aa15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 SSR1P43307 286 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 IQSEC3Q9UPP2 1182 aaPredicted RBP15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 KIAA0754O94854 1291 aa15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 F13A1P00488 732 aa15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 ZMYM3Q14202 1370 aa15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 USO1O60763 962 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 UTP14AQ9BVJ6 771 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 PRKCSHP14314 528 aaPredicted RBP15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 TDRD12Q587J7 1177 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 PPP4R3AQ6IN85 833 aa15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 NIP7Q9Y221 180 aaKnown RBP eCLIP15.31■□□□□ 0.04
CACNA1C-222ENST00000406454 CCDC178Q5BJE1 867 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 RNF113AO15541 343 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 SYKP43405 635 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 USP48Q86UV5 1035 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 TAX1BP1Q86VP1 789 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 KCNG4Q8TDN1 519 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 SETDB2Q96T68 719 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 DDB1Q16531 1140 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 RTN1Q16799 776 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 C16orf45Q96MC5 204 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 BMP15O95972 392 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 NBPF7P0C2Y1 421 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 CETN2P41208 172 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 DZIP3Q86Y13 1208 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 STX8Q9UNK0 236 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 CRACR2AQ9BSW2 395 aa15.3■□□□□ 0.04
CACNA1C-222ENST00000406454 ISM2Q6H9L7 571 aa15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 ABCC2Q92887 1545 aa15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 ZBTB7BO15156 539 aaPredicted RBP15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 CCDC40Q4G0X9 1142 aa15.29■□□□□ 0.04
CACNA1C-222ENST00000406454 NAA16Q6N069 864 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms