RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 SETDB2Q96T68 719 aa8.71□□□□□ -1.02
VIM2P-201ENST00000402383 ZNF652Q9Y2D9 606 aa8.71□□□□□ -1.02
VIM2P-201ENST00000402383 MYBBP1AQ9BQG0 1328 aaKnown RBP8.71□□□□□ -1.02
VIM2P-201ENST00000402383 SCN4AP35499 1836 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 CACNA1FO60840 1977 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 TOMM70O94826 608 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 SRGNP10124 158 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 LMNB1P20700 586 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 STYK1Q6J9G0 422 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 ARHGAP27Q6ZUM4 889 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 LRP10Q7Z4F1 713 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 DZIP3Q86Y13 1208 aaKnown RBP8.7□□□□□ -1.02
VIM2P-201ENST00000402383 TBC1D2BQ9UPU7 963 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 SNED1Q8TER0 1413 aa8.7□□□□□ -1.02
VIM2P-201ENST00000402383 HSPA6P17066 643 aa8.69□□□□□ -1.02
VIM2P-201ENST00000402383 FOSBP53539 338 aa8.69□□□□□ -1.02
VIM2P-201ENST00000402383 LMOD3Q0VAK6 560 aa8.69□□□□□ -1.02
VIM2P-201ENST00000402383 DCTN1Q14203 1278 aa8.69□□□□□ -1.02
VIM2P-201ENST00000402383 SOGA3Q5TF21 947 aa8.69□□□□□ -1.02
VIM2P-201ENST00000402383 C9orf131Q5VYM1 1079 aa8.69□□□□□ -1.02
VIM2P-201ENST00000402383 NPM2Q86SE8 214 aaKnown RBP8.69□□□□□ -1.02
VIM2P-201ENST00000402383 RBM46Q8TBY0 533 aaKnown RBP8.69□□□□□ -1.02
VIM2P-201ENST00000402383 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
VIM2P-201ENST00000402383 CDHR5Q9HBB8 845 aa8.69□□□□□ -1.02
VIM2P-201ENST00000402383 PRAMEF22A3QJZ6 481 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 NFKBIEO00221 500 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 TMPOP42166 694 aaKnown RBP8.68□□□□□ -1.02
VIM2P-201ENST00000402383 TSR1Q2NL82 804 aaKnown RBP8.68□□□□□ -1.02
VIM2P-201ENST00000402383 CRY2Q49AN0 593 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 TPTE2Q6XPS3 522 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 C2CD5Q86YS7 1000 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 CNBD1Q8NA66 436 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 CNKSR1Q969H4 720 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 MASTLQ96GX5 879 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 LHX6Q9UPM6 363 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 RNF123Q5XPI4 1314 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 KDM2BQ8NHM5 1336 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 MAPK8IP3Q9UPT6 1336 aa8.68□□□□□ -1.02
VIM2P-201ENST00000402383 CHL1O00533 1208 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 HOXB7P09629 217 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 HOXA10P31260 410 aaPredicted RBP8.67□□□□□ -1.02
VIM2P-201ENST00000402383 PRELPP51888 382 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 LAMB2P55268 1798 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 ST5P78524 1137 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 FSTL1Q12841 308 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 HIC1Q14526 733 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 MAP3K15Q6ZN16 1313 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
VIM2P-201ENST00000402383 PRKRIP1Q9H875 184 aaPredicted RBP8.67□□□□□ -1.02
VIM2P-201ENST00000402383 GLTPD2A6NH11 291 aa8.66□□□□□ -1.02
VIM2P-201ENST00000402383 NPR1P16066 1061 aa8.66□□□□□ -1.02
VIM2P-201ENST00000402383 RIPK4P57078 832 aa8.66□□□□□ -1.02
VIM2P-201ENST00000402383 PTGDRQ13258 359 aa8.66□□□□□ -1.02
VIM2P-201ENST00000402383 ZNF34Q8IZ26 560 aa8.66□□□□□ -1.02
VIM2P-201ENST00000402383 RUNDC1Q96C34 613 aa8.66□□□□□ -1.02
VIM2P-201ENST00000402383 NYXQ9GZU5 481 aa8.66□□□□□ -1.02
VIM2P-201ENST00000402383 SENP3-EIF4A1A0A087X0R7 540 aa8.65□□□□□ -1.02
VIM2P-201ENST00000402383 HOXB1P14653 301 aaPredicted RBP8.65□□□□□ -1.02
VIM2P-201ENST00000402383 FECHP22830 423 aa8.65□□□□□ -1.02
VIM2P-201ENST00000402383 APLP1P51693 650 aa8.65□□□□□ -1.02
VIM2P-201ENST00000402383 DDX10Q13206 875 aaKnown RBP8.65□□□□□ -1.02
VIM2P-201ENST00000402383 CNGB1Q14028 1251 aaPredicted RBP8.65□□□□□ -1.02
VIM2P-201ENST00000402383 SLC10A5Q5PT55 438 aa8.65□□□□□ -1.02
VIM2P-201ENST00000402383 GIGYF2Q6Y7W6 1299 aaKnown RBP8.65□□□□□ -1.02
VIM2P-201ENST00000402383 NBPF5PQ86XG9 351 aaPredicted RBP8.65□□□□□ -1.02
VIM2P-201ENST00000402383 MIS18AQ9NYP9 233 aa8.65□□□□□ -1.02
VIM2P-201ENST00000402383 RNF181Q9P0P0 153 aa8.65□□□□□ -1.02
VIM2P-201ENST00000402383 ADAMTSL1Q8N6G6 1762 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 ZNF853P0CG23 659 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 ALDH1B1P30837 517 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 MAP2K5Q13163 448 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 HLFQ16534 295 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 CC2D2BQ6DHV5 1058 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 PRPF40BQ6NWY9 871 aaKnown RBP8.64□□□□□ -1.03
VIM2P-201ENST00000402383 BICDL1Q6ZP65 573 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 DNAJC5GQ8N7S2 189 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 ADAM33Q9BZ11 813 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 NMRK2Q9NPI5 230 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 WWC3Q9ULE0 1092 aa8.64□□□□□ -1.03
VIM2P-201ENST00000402383 NIP7Q9Y221 180 aaKnown RBP eCLIP8.64□□□□□ -1.03
VIM2P-201ENST00000402383 LRRC37AA6NMS7 1700 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 DDX60Q8IY21 1712 aaKnown RBP8.63□□□□□ -1.03
VIM2P-201ENST00000402383 VEGFAP15692 232 aaPredicted RBP8.63□□□□□ -1.03
VIM2P-201ENST00000402383 PARP10Q53GL7 1025 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 PPP4R3BQ5MIZ7 849 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 C6orf132Q5T0Z8 1188 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 RTKN2Q8IZC4 609 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 CRAMP1Q96RY5 1269 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 PSMD1Q99460 953 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 THUMPD2Q9BTF0 503 aaKnown RBP8.63□□□□□ -1.03
VIM2P-201ENST00000402383 VPS33BQ9H267 617 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 TAOK3Q9H2K8 898 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 DDX21Q9NR30 783 aaKnown RBP eCLIP8.63□□□□□ -1.03
VIM2P-201ENST00000402383 TSPYL4Q9UJ04 414 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 ADAMTS8Q9UP79 889 aa8.63□□□□□ -1.03
VIM2P-201ENST00000402383 UBN2Q6ZU65 1347 aa8.62□□□□□ -1.03
VIM2P-201ENST00000402383 POTECB2RU33 542 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms