RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 DACT1Q9NYF0 836 aa23.22■■□□□ 1.31
COL13A1-205ENST00000398978 KRT28Q7Z3Y7 464 aa23.22■■□□□ 1.31
COL13A1-205ENST00000398978 DBNDD2Q9BQY9 259 aa23.22■■□□□ 1.31
COL13A1-205ENST00000398978 PYCARDQ9ULZ3 195 aa23.22■■□□□ 1.31
COL13A1-205ENST00000398978 TAF5LO75529 589 aa23.21■■□□□ 1.31
COL13A1-205ENST00000398978 HSP90B1P14625 803 aaKnown RBP23.21■■□□□ 1.31
COL13A1-205ENST00000398978 TERF1P54274 439 aa23.21■■□□□ 1.31
COL13A1-205ENST00000398978 PIBF1Q8WXW3 757 aa23.21■■□□□ 1.31
COL13A1-205ENST00000398978 RNF20Q5VTR2 975 aa23.2■■□□□ 1.3
COL13A1-205ENST00000398978 RAPGEF4Q8WZA2 1011 aa23.2■■□□□ 1.3
COL13A1-205ENST00000398978 ZMYND15Q9H091 742 aa23.2■■□□□ 1.3
COL13A1-205ENST00000398978 KCNF1Q9H3M0 494 aa23.2■■□□□ 1.3
COL13A1-205ENST00000398978 GOLGA6L4A6NEF3 574 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 HIP1O00291 1037 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 CHRNA2Q15822 529 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 ANKRD13DQ6ZTN6 518 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 SPATA32Q96LK8 384 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 NUP62CLQ9H1M0 184 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 A0A0G2JLW4 131 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 CCDC192P0DO97 292 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 HDAC5Q9UQL6 1122 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 USP54Q70EL1 1684 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 UTYO14607 1347 aa23.19■■□□□ 1.3
COL13A1-205ENST00000398978 CSB-PGBD3P0DP91 1061 aa23.18■■□□□ 1.3
COL13A1-205ENST00000398978 TRHP20396 242 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-205ENST00000398978 SLC52A2Q9HAB3 445 aa23.18■■□□□ 1.3
COL13A1-205ENST00000398978 MED23Q9ULK4 1368 aa23.18■■□□□ 1.3
COL13A1-205ENST00000398978 PTPN12Q05209 780 aaKnown RBP23.18■■□□□ 1.3
COL13A1-205ENST00000398978 TNNI3KQ59H18 835 aa23.18■■□□□ 1.3
COL13A1-205ENST00000398978 Q6ZUG5 572 aa23.18■■□□□ 1.3
COL13A1-205ENST00000398978 METTL22Q9BUU2 404 aaPredicted RBP23.18■■□□□ 1.3
COL13A1-205ENST00000398978 FPGT-TNNI3KV9GXZ4 949 aa23.18■■□□□ 1.3
COL13A1-205ENST00000398978 NAP1L2Q9ULW6 460 aaPredicted RBP23.17■■□□□ 1.3
COL13A1-205ENST00000398978 TYRO3Q06418 890 aa23.17■■□□□ 1.3
COL13A1-205ENST00000398978 MAP3K11Q16584 847 aa23.17■■□□□ 1.3
COL13A1-205ENST00000398978 MRVI1Q9Y6F6 885 aa23.17■■□□□ 1.3
COL13A1-205ENST00000398978 ERBB3P21860 1342 aa23.17■■□□□ 1.3
COL13A1-205ENST00000398978 FTOQ9C0B1 505 aaKnown RBP eCLIP23.17■■□□□ 1.3
COL13A1-205ENST00000398978 TNMDQ9H2S6 317 aa23.17■■□□□ 1.3
COL13A1-205ENST00000398978 A0A087WWV3 80 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 ANO6Q4KMQ2 910 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 BRF1Q92994 677 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 NEUROD6Q96NK8 337 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 ADGRL3Q9HAR2 1447 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 RGPD5Q99666 1765 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 A0A087WZG4 1122 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 NR1I2O75469 434 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 FGD1P98174 961 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 BICD2Q8TD16 824 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 LEO1Q8WVC0 666 aaPredicted RBP23.16■■□□□ 1.3
COL13A1-205ENST00000398978 NPHP3Q7Z494 1330 aa23.16■■□□□ 1.3
COL13A1-205ENST00000398978 CYP21A2P08686 494 aa23.15■■□□□ 1.3
COL13A1-205ENST00000398978 NEK1Q96PY6 1258 aa23.15■■□□□ 1.3
COL13A1-205ENST00000398978 PTGS1P23219 599 aa23.14■■□□□ 1.3
COL13A1-205ENST00000398978 CHST3Q7LGC8 479 aa23.14■■□□□ 1.3
COL13A1-205ENST00000398978 PGBD1Q96JS3 809 aa23.14■■□□□ 1.3
COL13A1-205ENST00000398978 KDM6AO15550 1401 aaPredicted RBP23.14■■□□□ 1.3
COL13A1-205ENST00000398978 CHD2O14647 1828 aaKnown RBP23.14■■□□□ 1.3
COL13A1-205ENST00000398978 DYNC1I1O14576 645 aa23.14■■□□□ 1.29
COL13A1-205ENST00000398978 RFX5P48382 616 aaPredicted RBP23.14■■□□□ 1.29
COL13A1-205ENST00000398978 NRBP1Q9UHY1 535 aa23.14■■□□□ 1.29
COL13A1-205ENST00000398978 PHKG2P15735 406 aa23.14■■□□□ 1.29
COL13A1-205ENST00000398978 BCL11BQ9C0K0 894 aaPredicted RBP23.14■■□□□ 1.29
COL13A1-205ENST00000398978 TTC5Q8N0Z6 440 aa23.13■■□□□ 1.29
COL13A1-205ENST00000398978 ZNF609O15014 1411 aa23.13■■□□□ 1.29
COL13A1-205ENST00000398978 PDCP20941 246 aa23.13■■□□□ 1.29
COL13A1-205ENST00000398978 TIMM10P62072 90 aa23.13■■□□□ 1.29
COL13A1-205ENST00000398978 LMBR1LQ6UX01 489 aa23.13■■□□□ 1.29
COL13A1-205ENST00000398978 PKNOX2Q96KN3 472 aa23.13■■□□□ 1.29
COL13A1-205ENST00000398978 NCAPD2Q15021 1401 aa23.13■■□□□ 1.29
COL13A1-205ENST00000398978 CCT2P78371 535 aaKnown RBP23.12■■□□□ 1.29
COL13A1-205ENST00000398978 ANKRD1Q15327 319 aa23.12■■□□□ 1.29
COL13A1-205ENST00000398978 STOX1Q6ZVD7 989 aa23.12■■□□□ 1.29
COL13A1-205ENST00000398978 H3BQV1 296 aa23.12■■□□□ 1.29
COL13A1-205ENST00000398978 GUCY1B3Q02153 619 aa23.12■■□□□ 1.29
COL13A1-205ENST00000398978 LRMPQ12912 555 aa23.12■■□□□ 1.29
COL13A1-205ENST00000398978 IFFO2Q5TF58 517 aa23.12■■□□□ 1.29
COL13A1-205ENST00000398978 DRC7Q8IY82 874 aa23.12■■□□□ 1.29
COL13A1-205ENST00000398978 CBX8Q9HC52 389 aa23.12■■□□□ 1.29
COL13A1-205ENST00000398978 PROSER2Q86WR7 435 aaPredicted RBP23.12■■□□□ 1.29
COL13A1-205ENST00000398978 FAM200AQ8TCP9 573 aa23.12■■□□□ 1.29
COL13A1-205ENST00000398978 GOLIM4O00461 696 aa23.11■■□□□ 1.29
COL13A1-205ENST00000398978 TATP17735 454 aaPredicted RBP23.11■■□□□ 1.29
COL13A1-205ENST00000398978 DNAJC25Q9H1X3 360 aa23.11■■□□□ 1.29
COL13A1-205ENST00000398978 ATP5JP18859 108 aa23.11■■□□□ 1.29
COL13A1-205ENST00000398978 MYRIPQ8NFW9 859 aa23.11■■□□□ 1.29
COL13A1-205ENST00000398978 GTF3C6Q969F1 213 aa23.11■■□□□ 1.29
COL13A1-205ENST00000398978 FBXW7Q969H0 707 aa23.11■■□□□ 1.29
COL13A1-205ENST00000398978 COPRSQ9NQ92 184 aa23.11■■□□□ 1.29
COL13A1-205ENST00000398978 SNRKQ9NRH2 765 aa23.11■■□□□ 1.29
COL13A1-205ENST00000398978 TAOK2Q9UL54 1235 aa23.11■■□□□ 1.29
COL13A1-205ENST00000398978 SCRN1Q12765 414 aa23.1■■□□□ 1.29
COL13A1-205ENST00000398978 ZNF594Q96JF6 807 aaPredicted RBP23.1■■□□□ 1.29
COL13A1-205ENST00000398978 NCOA5Q9HCD5 579 aaKnown RBP23.1■■□□□ 1.29
COL13A1-205ENST00000398978 C5P01031 1676 aa23.1■■□□□ 1.29
COL13A1-205ENST00000398978 CYP27B1O15528 508 aa23.1■■□□□ 1.29
COL13A1-205ENST00000398978 APOBRQ0VD83 1088 aa23.1■■□□□ 1.29
COL13A1-205ENST00000398978 LRP10Q7Z4F1 713 aa23.1■■□□□ 1.29
COL13A1-205ENST00000398978 ERCC4Q92889 916 aaPredicted RBP23.1■■□□□ 1.29
COL13A1-205ENST00000398978 CCDC186Q7Z3E2 898 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms