RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 RRP7AQ9Y3A4 280 aaKnown RBP11.23□□□□□ -0.61
SCFD1-202ENST00000396629 ABCC4O15439 1325 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 U2AF1L5P0DN76 240 aaPredicted RBP11.23□□□□□ -0.61
SCFD1-202ENST00000396629 U2AF1Q01081 240 aaKnown RBP eCLIP11.23□□□□□ -0.618e-6■■□□□ 11.7
SCFD1-202ENST00000396629 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 PARP10Q53GL7 1025 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 PNISRQ8TF01 805 aaKnown RBP11.23□□□□□ -0.61
SCFD1-202ENST00000396629 BCL2L13Q9BXK5 485 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 SAGE1Q9NXZ1 904 aa11.23□□□□□ -0.61
SCFD1-202ENST00000396629 FAM155AB1AL88 458 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-202ENST00000396629 HUNKP57058 714 aa11.22□□□□□ -0.61
SCFD1-202ENST00000396629 EIF4A1P60842 406 aaKnown RBP11.22□□□□□ -0.61
SCFD1-202ENST00000396629 CNGB1Q14028 1251 aaPredicted RBP11.22□□□□□ -0.61
SCFD1-202ENST00000396629 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
SCFD1-202ENST00000396629 CNOT7Q9UIV1 285 aaKnown RBP11.22□□□□□ -0.61
SCFD1-202ENST00000396629 BBOX1O75936 387 aa11.21□□□□□ -0.61
SCFD1-202ENST00000396629 RAD17O75943 681 aa11.21□□□□□ -0.61
SCFD1-202ENST00000396629 MYL6BP14649 208 aa11.21□□□□□ -0.61
SCFD1-202ENST00000396629 DPP8Q6V1X1 898 aaPredicted RBP11.21□□□□□ -0.61
SCFD1-202ENST00000396629 MPNDQ8N594 471 aa11.21□□□□□ -0.61
SCFD1-202ENST00000396629 TAF1P21675 1872 aa11.21□□□□□ -0.61
SCFD1-202ENST00000396629 ERBB4Q15303 1308 aa11.21□□□□□ -0.62
SCFD1-202ENST00000396629 YDJCA8MPS7 323 aa11.21□□□□□ -0.62
SCFD1-202ENST00000396629 NCBP3Q53F19 620 aaKnown RBP11.21□□□□□ -0.62
SCFD1-202ENST00000396629 LRRC37AA6NMS7 1700 aa11.21□□□□□ -0.62
SCFD1-202ENST00000396629 SHTN1A0MZ66 631 aa11.2□□□□□ -0.62
SCFD1-202ENST00000396629 H7C1D1 291 aa11.2□□□□□ -0.62
SCFD1-202ENST00000396629 RGMBQ6NW40 437 aa11.2□□□□□ -0.62
SCFD1-202ENST00000396629 DPF2Q92785 391 aa11.2□□□□□ -0.62
SCFD1-202ENST00000396629 UTP14AQ9BVJ6 771 aaKnown RBP11.2□□□□□ -0.62
SCFD1-202ENST00000396629 DUOX1Q9NRD9 1551 aa11.2□□□□□ -0.62
SCFD1-202ENST00000396629 SOX10P56693 466 aa11.19□□□□□ -0.62
SCFD1-202ENST00000396629 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
SCFD1-202ENST00000396629 LRP10Q7Z4F1 713 aa11.19□□□□□ -0.62
SCFD1-202ENST00000396629 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
SCFD1-202ENST00000396629 KIF23Q02241 960 aaPredicted RBP11.19□□□□□ -0.62
SCFD1-202ENST00000396629 MICALL2Q8IY33 904 aa11.19□□□□□ -0.62
SCFD1-202ENST00000396629 GBA2Q9HCG7 927 aaPredicted RBP11.19□□□□□ -0.62
SCFD1-202ENST00000396629 RNF186Q9NXI6 227 aa11.19□□□□□ -0.62
SCFD1-202ENST00000396629 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
SCFD1-202ENST00000396629 C2orf69Q8N8R5 385 aa11.18□□□□□ -0.62
SCFD1-202ENST00000396629 DDX60Q8IY21 1712 aaKnown RBP11.18□□□□□ -0.62
SCFD1-202ENST00000396629 PPP2R1AP30153 589 aa11.18□□□□□ -0.62
SCFD1-202ENST00000396629 GRAPQ13588 217 aa11.18□□□□□ -0.62
SCFD1-202ENST00000396629 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
SCFD1-202ENST00000396629 GRAPLQ8TC17 118 aaPredicted RBP11.18□□□□□ -0.62
SCFD1-202ENST00000396629 TRPA1O75762 1119 aa11.17□□□□□ -0.62
SCFD1-202ENST00000396629 PDIA6Q15084 440 aa11.17□□□□□ -0.62
SCFD1-202ENST00000396629 DDX46Q7L014 1031 aaKnown RBP11.17□□□□□ -0.62
SCFD1-202ENST00000396629 KRT26Q7Z3Y9 468 aa11.17□□□□□ -0.62
SCFD1-202ENST00000396629 TMC4Q7Z404 712 aa11.17□□□□□ -0.62
SCFD1-202ENST00000396629 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
SCFD1-202ENST00000396629 PSMD14O00487 310 aa11.16□□□□□ -0.62
SCFD1-202ENST00000396629 SLC10A3P09131 477 aa11.16□□□□□ -0.62
SCFD1-202ENST00000396629 ZNF157P51786 506 aaPredicted RBP11.16□□□□□ -0.62
SCFD1-202ENST00000396629 CTU1Q7Z7A3 348 aaKnown RBP11.16□□□□□ -0.62
SCFD1-202ENST00000396629 CSRNP1Q96S65 589 aa11.16□□□□□ -0.62
SCFD1-202ENST00000396629 EGFRP00533 1210 aa11.16□□□□□ -0.62
SCFD1-202ENST00000396629 HCLS1P14317 486 aaPredicted RBP11.16□□□□□ -0.62
SCFD1-202ENST00000396629 RPS12P25398 132 aaKnown RBP11.16□□□□□ -0.62
SCFD1-202ENST00000396629 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
SCFD1-202ENST00000396629 NLRP10Q86W26 655 aa11.16□□□□□ -0.62
SCFD1-202ENST00000396629 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
SCFD1-202ENST00000396629 ADM5C9JUS6 153 aa11.15□□□□□ -0.62
SCFD1-202ENST00000396629 HSP90AB3PQ58FF7 597 aa11.15□□□□□ -0.62
SCFD1-202ENST00000396629 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-202ENST00000396629 DCPSQ96C86 337 aaKnown RBP11.15□□□□□ -0.62
SCFD1-202ENST00000396629 NPM3O75607 178 aaKnown RBP11.14□□□□□ -0.63
SCFD1-202ENST00000396629 PLEKHF1Q96S99 279 aa11.14□□□□□ -0.63
SCFD1-202ENST00000396629 SCN9AQ15858 1988 aa11.14□□□□□ -0.63
SCFD1-202ENST00000396629 NFE2L2Q16236 605 aa11.14□□□□□ -0.63
SCFD1-202ENST00000396629 WASHC4Q2M389 1173 aa11.14□□□□□ -0.63
SCFD1-202ENST00000396629 PROSER3Q2NL68 480 aa11.14□□□□□ -0.63
SCFD1-202ENST00000396629 PSME4Q14997 1843 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 NEFMP07197 916 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 TCIRG1Q13488 830 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 DBNDD1Q9H9R9 158 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 TRMT112Q9UI30 125 aaKnown RBP11.13□□□□□ -0.63
SCFD1-202ENST00000396629 HPS5Q9UPZ3 1129 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 SH3TC1Q8TE82 1336 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 RTL9Q8NET4 1388 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 PKN2Q16513 984 aaKnown RBP11.13□□□□□ -0.63
SCFD1-202ENST00000396629 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
SCFD1-202ENST00000396629 RASAL3Q86YV0 1011 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 KCNQ5Q9NR82 932 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 POLLQ9UGP5 575 aa11.13□□□□□ -0.63
SCFD1-202ENST00000396629 PAPPA2Q9BXP8 1791 aa11.12□□□□□ -0.63
SCFD1-202ENST00000396629 ECE2O60344 883 aa11.12□□□□□ -0.63
SCFD1-202ENST00000396629 ANXA1P04083 346 aa11.12□□□□□ -0.63
SCFD1-202ENST00000396629 EIF2S2P20042 333 aaKnown RBP11.12□□□□□ -0.63
SCFD1-202ENST00000396629 KIF4BQ2VIQ3 1234 aa11.12□□□□□ -0.63
SCFD1-202ENST00000396629 COPS6Q7L5N1 327 aa11.12□□□□□ -0.63
SCFD1-202ENST00000396629 CCER1Q8TC90 406 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-202ENST00000396629 COL4A1P02462 1669 aa11.12□□□□□ -0.63
SCFD1-202ENST00000396629 RIMBP2O15034 1052 aa11.11□□□□□ -0.63
SCFD1-202ENST00000396629 VIL1P09327 827 aaKnown RBP11.11□□□□□ -0.63
SCFD1-202ENST00000396629 SF3B3Q15393 1217 aaKnown RBP11.11□□□□□ -0.63
SCFD1-202ENST00000396629 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms