RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 SUSD4Q5VX71 490 aa18.46■□□□□ 0.55
VCPKMT-201ENST00000395859 SAMD7Q7Z3H4 446 aa18.46■□□□□ 0.55
VCPKMT-201ENST00000395859 LAMB4A4D0S4 1761 aa18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 RANBP2P49792 3224 aaKnown RBP18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 ADM5C9JUS6 153 aa18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 H7C1D1 291 aa18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 NOM1Q5C9Z4 860 aaKnown RBP18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 RASAL3Q86YV0 1011 aa18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 ZNF34Q8IZ26 560 aa18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 ZNF296Q8WUU4 475 aaPredicted RBP18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 ABCC4O15439 1325 aa18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 MAP3K15Q6ZN16 1313 aa18.45■□□□□ 0.54
VCPKMT-201ENST00000395859 SLC10A5Q5PT55 438 aa18.43■□□□□ 0.54
VCPKMT-201ENST00000395859 FBXO46Q6PJ61 603 aaPredicted RBP18.43■□□□□ 0.54
VCPKMT-201ENST00000395859 SP8Q8IXZ3 490 aa18.43■□□□□ 0.54
VCPKMT-201ENST00000395859 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
VCPKMT-201ENST00000395859 DPP8Q6V1X1 898 aaPredicted RBP18.42■□□□□ 0.54
VCPKMT-201ENST00000395859 TTLL7Q6ZT98 887 aa18.42■□□□□ 0.54
VCPKMT-201ENST00000395859 GPTP24298 496 aa18.41■□□□□ 0.54
VCPKMT-201ENST00000395859 TBC1D10BQ4KMP7 808 aaPredicted RBP18.41■□□□□ 0.54
VCPKMT-201ENST00000395859 COL6A3P12111 3177 aa18.41■□□□□ 0.54
VCPKMT-201ENST00000395859 KIAA0100Q14667 2235 aaKnown RBP18.4■□□□□ 0.54
VCPKMT-201ENST00000395859 BBOX1O75936 387 aa18.4■□□□□ 0.54
VCPKMT-201ENST00000395859 MPNDQ8N594 471 aa18.4■□□□□ 0.54
VCPKMT-201ENST00000395859 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
VCPKMT-201ENST00000395859 LAMB2P55268 1798 aa18.4■□□□□ 0.54
VCPKMT-201ENST00000395859 TRIOBPQ9H2D6 2365 aa18.39■□□□□ 0.53
VCPKMT-201ENST00000395859 PSMD14O00487 310 aa18.39■□□□□ 0.53
VCPKMT-201ENST00000395859 NLRP3Q96P20 1036 aa18.39■□□□□ 0.53
VCPKMT-201ENST00000395859 ANKRD36CQ5JPF3 1778 aa18.39■□□□□ 0.53
VCPKMT-201ENST00000395859 RBBP6Q7Z6E9 1792 aaKnown RBP18.39■□□□□ 0.53
VCPKMT-201ENST00000395859 CEP290O15078 2479 aa18.39■□□□□ 0.53
VCPKMT-201ENST00000395859 CUL9Q8IWT3 2517 aa18.39■□□□□ 0.53
VCPKMT-201ENST00000395859 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
VCPKMT-201ENST00000395859 TBC1D8O95759 1140 aa18.38■□□□□ 0.53
VCPKMT-201ENST00000395859 HSPA5P11021 654 aaKnown RBP18.38■□□□□ 0.53
VCPKMT-201ENST00000395859 DCPSQ96C86 337 aaKnown RBP18.38■□□□□ 0.53
VCPKMT-201ENST00000395859 CFHR5Q9BXR6 569 aa18.38■□□□□ 0.53
VCPKMT-201ENST00000395859 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
VCPKMT-201ENST00000395859 HDAC9Q9UKV0 1011 aa18.38■□□□□ 0.53
VCPKMT-201ENST00000395859 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
VCPKMT-201ENST00000395859 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
VCPKMT-201ENST00000395859 GPR25O00155 361 aa18.37■□□□□ 0.53
VCPKMT-201ENST00000395859 MCM10Q7L590 875 aa18.37■□□□□ 0.53
VCPKMT-201ENST00000395859 CDCA5Q96FF9 252 aa18.37■□□□□ 0.53
VCPKMT-201ENST00000395859 TMX4Q9H1E5 349 aaPredicted RBP18.37■□□□□ 0.53
VCPKMT-201ENST00000395859 RTL9Q8NET4 1388 aa18.37■□□□□ 0.53
VCPKMT-201ENST00000395859 POTEFA5A3E0 1075 aa18.36■□□□□ 0.53
VCPKMT-201ENST00000395859 U2SURPO15042 1029 aaKnown RBP18.36■□□□□ 0.53
VCPKMT-201ENST00000395859 ASTN2O75129 1339 aaPredicted RBP18.36■□□□□ 0.53
VCPKMT-201ENST00000395859 RPS12P25398 132 aaKnown RBP18.36■□□□□ 0.53
VCPKMT-201ENST00000395859 TM4SF4P48230 202 aa18.36■□□□□ 0.53
VCPKMT-201ENST00000395859 FKBP1BP68106 108 aa18.36■□□□□ 0.53
VCPKMT-201ENST00000395859 GIGYF2Q6Y7W6 1299 aaKnown RBP18.36■□□□□ 0.53
VCPKMT-201ENST00000395859 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
VCPKMT-201ENST00000395859 NGEFQ8N5V2 710 aa18.35■□□□□ 0.53
VCPKMT-201ENST00000395859 EIF4G2P78344 907 aaKnown RBP eCLIP18.34■□□□□ 0.53
VCPKMT-201ENST00000395859 PARP10Q53GL7 1025 aa18.34■□□□□ 0.53
VCPKMT-201ENST00000395859 KIF6Q6ZMV9 814 aa18.34■□□□□ 0.53
VCPKMT-201ENST00000395859 PPP1R42Q7Z4L9 355 aa18.34■□□□□ 0.53
VCPKMT-201ENST00000395859 R3HDMLQ9H3Y0 253 aa18.34■□□□□ 0.53
VCPKMT-201ENST00000395859 ZBTB3Q9H5J0 574 aa18.34■□□□□ 0.53
VCPKMT-201ENST00000395859 KCNQ5Q9NR82 932 aa18.34■□□□□ 0.53
VCPKMT-201ENST00000395859 GGA3Q9NZ52 723 aa18.34■□□□□ 0.53
VCPKMT-201ENST00000395859 TAF1P21675 1872 aa18.34■□□□□ 0.53
VCPKMT-201ENST00000395859 SCN9AQ15858 1988 aa18.33■□□□□ 0.53
VCPKMT-201ENST00000395859 KIF4BQ2VIQ3 1234 aa18.33■□□□□ 0.52
VCPKMT-201ENST00000395859 LRP10Q7Z4F1 713 aa18.33■□□□□ 0.52
VCPKMT-201ENST00000395859 SULF1Q8IWU6 871 aa18.33■□□□□ 0.52
VCPKMT-201ENST00000395859 ZNF609O15014 1411 aa18.32■□□□□ 0.52
VCPKMT-201ENST00000395859 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
VCPKMT-201ENST00000395859 GRAPQ13588 217 aa18.32■□□□□ 0.52
VCPKMT-201ENST00000395859 DCTN1Q14203 1278 aa18.32■□□□□ 0.52
VCPKMT-201ENST00000395859 RBM26Q5T8P6 1007 aaKnown RBP18.32■□□□□ 0.52
VCPKMT-201ENST00000395859 GRAPLQ8TC17 118 aaPredicted RBP18.32■□□□□ 0.52
VCPKMT-201ENST00000395859 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
VCPKMT-201ENST00000395859 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
VCPKMT-201ENST00000395859 UTP14AQ9BVJ6 771 aaKnown RBP18.31■□□□□ 0.52
VCPKMT-201ENST00000395859 DBNDD1Q9H9R9 158 aa18.31■□□□□ 0.52
VCPKMT-201ENST00000395859 COLQQ9Y215 455 aaPredicted RBP18.31■□□□□ 0.52
VCPKMT-201ENST00000395859 DDX60Q8IY21 1712 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-201ENST00000395859 FKTNO75072 461 aa18.3■□□□□ 0.52
VCPKMT-201ENST00000395859 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-201ENST00000395859 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-201ENST00000395859 MOB2Q70IA6 237 aa18.3■□□□□ 0.52
VCPKMT-201ENST00000395859 MIS18AQ9NYP9 233 aa18.3■□□□□ 0.52
VCPKMT-201ENST00000395859 RRP7AQ9Y3A4 280 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-201ENST00000395859 ZNF280AP59817 542 aaPredicted RBP18.29■□□□□ 0.52
VCPKMT-201ENST00000395859 WASHC4Q2M389 1173 aa18.29■□□□□ 0.52
VCPKMT-201ENST00000395859 TMC4Q7Z404 712 aa18.29■□□□□ 0.52
VCPKMT-201ENST00000395859 COL4A1P02462 1669 aa18.28■□□□□ 0.52
VCPKMT-201ENST00000395859 MYL6BP14649 208 aa18.28■□□□□ 0.52
VCPKMT-201ENST00000395859 CC2D1BQ5T0F9 858 aaKnown RBP18.28■□□□□ 0.52
VCPKMT-201ENST00000395859 RTF1Q92541 710 aaKnown RBP18.28■□□□□ 0.52
VCPKMT-201ENST00000395859 POLLQ9UGP5 575 aa18.28■□□□□ 0.52
VCPKMT-201ENST00000395859 LAMA3Q16787 3333 aa18.28■□□□□ 0.52
VCPKMT-201ENST00000395859 ECE2O60344 883 aa18.27■□□□□ 0.52
VCPKMT-201ENST00000395859 HCLS1P14317 486 aaPredicted RBP18.27■□□□□ 0.52
VCPKMT-201ENST00000395859 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms